Query= MSMg01no499_g22.b1 MSMg01no499_g22.b1 CHROMAT_FILE:
MSMg01no499_g22.b1 PHD_FILE: MSMg01no499_g22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:25:48 2005
(642 letters)
>mm_chr12_90492280_90493320
Length = 1041
Score = 1154 bits (597), Expect = 0.0
Identities = 627/641 (97%), Gaps = 9/641 (1%)
Strand = Plus / Plus
Query: 6 gaattccataagtcttttc----ttctgacaatttcacagctcataattcttcccaaaag 61
|||||||||||||| | |||||||||||||||||||||||||||||||||||||
Sbjct: 206 gaattccataagtc----cacacttctgacaatttcacagctcataattcttcccaaaag 261
Query: 62 gtactttatgcttatacacacctatgtatttatgactccacatttttatacaatggtaat 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 gtactttatgcttatacacacctatgtatttatgactccacatttttatacaatggtaat 321
Query: 122 acaattatcactttgtcctgctcctaactctacttaacaaaatgacttggagggacacat 181
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 322 acaattatcactttgtcctgctcctaactctacttaacaaaatgacttggagggacgcat 381
Query: 182 aaaaacctaaggcaatgctcaatgttaaaaggtggcattgcatgcccgtacagaggtgtg 241
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 382 aaaaacctaaggcaatgctcaatgttaaaaggtggcattgcatgcctgtacagaggtgtg 441
Query: 242 ccatctattactgatggccattaagggtgtttgtggccttttaccaaggatgctttacta 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 ccatctattactgatggccattaagggtgtttgtggccttttaccaaggatgctttacta 501
Query: 302 aatatctgtgtatattttacacctgtacaactcagtctctcttgaattttgttggtaaat 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 aatatctgtgtatattttacacctgtacaactcagtctctcttgaattttgttggtaaat 561
Query: 362 tcatactgataactttctgacgtctagaaactggctacaaggagaaagacaaaaggcccg 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 tcatactgataactttctgacgtctagaaactggctacaaggagaaagacaaaaggcccg 621
Query: 422 cagtggcaatatagaggctcattcagaaaatatgcaggccccagccgtctcttggaatgc 481
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 622 cagtggcaatatagaggctcattcagaaaatatgcataccccagccgtctcttggaatgc 681
Query: 482 tttttttttctttgtgatgagtcttttgtttcacatgttgtttcagcccattatgtcctg 541
|||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 682 tttttttt-ctttgtgatgagtcttttgtttcacatgttgtttcagcccattatttcctg 740
Query: 542 aagcttcttcagatccttttcctggatgcccagtgagtgatggattgataccatttgcaa 601
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 aagcttcttcagatccttttcctggatgcccagtgagtgatggattgataccatttgcaa 800
Query: 602 gactgattcatatggcacttttgtttggcttttgacaggtt 642
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 gactgattcatatggcacttttgtttggcttttgacaggtt 841
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 642
Length of database: 1041
Length adjustment: 10
Effective length of query: 632
Effective length of database: 1031
Effective search space: 651592
Effective search space used: 651592
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no499_g22.g1 MSMg01no499_g22.g1 CHROMAT_FILE:
MSMg01no499_g22.g1 PHD_FILE: MSMg01no499_g22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:25:48 2005
(564 letters)
>mm_chr12_90576325_90577288
Length = 964
Score = 1083 bits (560), Expect = 0.0
Identities = 563/564 (99%)
Strand = Plus / Minus
Query: 1 actaaaatttacaaaaggtattattaaaaatgtgggaagattgatgacattgcttgaact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 764 actaaaatttacaaaaggtattattaaaaatgtgggaagattgatgacattgcttgaact 705
Query: 61 cagattccaattagaggcaatgagaaaggaaacatcgttgtcttaggttacctccttcac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 704 cagattccaattagaggcaatgagaaaggaaacatcgttgtcttaggttacctccttcac 645
Query: 121 ctctgaatgctggttgtgattttgttatttgatgcacatgctgtgaatgaaagggggcga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 644 ctctgaatgctggttgtgattttgttatttgatgcacatgctgtgaatgaaagggggcga 585
Query: 181 ctcaaactctgcaccctccaagagcagtctattgtgctgactggtctgcactgtcttcac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 ctcaaactctgcaccctccaagagcagtctattgtgctgactggtctgcactgtcttcac 525
Query: 241 agagtgttctaagtggtaagtgagcacacccaagaggcaggtgcacggtgtcagttgatt 300
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 524 agagtgttctaagtggtaagtgaacacacccaagaggcaggtgcacggtgtcagttgatt 465
Query: 301 aatgtggatgacaggcaaggtgacctgtaggaaatggctgctttcctcggggtctggaat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 aatgtggatgacaggcaaggtgacctgtaggaaatggctgctttcctcggggtctggaat 405
Query: 361 ataacaaactgaagtcagtcaagcatcccttgtgcatctttatggctgactgtccacaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 ataacaaactgaagtcagtcaagcatcccttgtgcatctttatggctgactgtccacaaa 345
Query: 421 aactttgaactcacggtgagcatctttggatgtcagcactttgtgtaggctgtatgtgtt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 aactttgaactcacggtgagcatctttggatgtcagcactttgtgtaggctgtatgtgtt 285
Query: 481 tgtctcacaaaccattgtatgttgtcatatgatattgatggagaaattagacagacttat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 tgtctcacaaaccattgtatgttgtcatatgatattgatggagaaattagacagacttat 225
Query: 541 gacccaaatatgaaaaaagaaatt 564
||||||||||||||||||||||||
Sbjct: 224 gacccaaatatgaaaaaagaaatt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 564
Length of database: 964
Length adjustment: 10
Effective length of query: 554
Effective length of database: 954
Effective search space: 528516
Effective search space used: 528516
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
