Query= MSMg01no501_l17.b1 MSMg01no501_l17.b1 CHROMAT_FILE:
MSMg01no501_l17.b1 PHD_FILE: MSMg01no501_l17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:28:36 2005
(654 letters)
>mm_chr12_49393096_49394149
Length = 1054
Score = 1181 bits (611), Expect = 0.0
Identities = 639/649 (98%), Gaps = 4/649 (0%)
Strand = Plus / Plus
Query: 8 gaattcaaggtttg-t-tccatgtgaatggaaaaggaagatatgttcaatgcactcattt 65
|||||||||||||| | | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 gaattcaaggtttgatgt--atgtgaatggaaaaggaagatatgttcaatgcactcattt 265
Query: 66 ctaagtaggtatgaattatatagatttggaatctactaatctcaaatctctcattgtatg 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 ctaagtaggtatgaattatatagatttggaatctactaatctcaaatctctcattgtatg 325
Query: 126 ttgtgtcatcagacttaccaaagcagaacaataaggaaaacagtatggaatttgtaaaac 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 ttgtgtcatcagacttaccaaagcagaacaataaggaaaacagtatggaatttgtaaaac 385
Query: 186 caagctctttcttttctaaaatagtgaaagttttaagaatctctgcttgcttctgcagtt 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 caagctctttcttttctaaaatagtgaaagttttaagaatctctgcttgcttctgcagtt 445
Query: 246 tctttgatgtcatatgagctttattcagtgtattaagaaggccgtcttttcctggtgtct 305
|||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||
Sbjct: 446 tctttgatgtcatatgagctttattcagtgtattaagaaggctgtcttttcctgctgtct 505
Query: 306 tttgtccatcacagaatataactttatagattaatatacaacgtgttgaattaaaccaat 365
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 506 tttgtccatcacagaatataactttatagattaatatacaacgttttgaattaaaccaat 565
Query: 366 tagagtttctatattttaaaatagatgaaaatgattgccttataacaataacagatcaat 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 tagagtttctatattttaaaatagatgaaaatgattgccttataacaataacagatcaat 625
Query: 426 tcatacagagcaaatcactgtgaatatatggcattacaattccataataagttttgctac 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 tcatacagagcaaatcactgtgaatatatggcattacaattccataataagttttgctac 685
Query: 486 ataaaaagggaaagataggtctctttgcataatgtttatctatgaagctctttgttccca 545
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 ataagaagggaaagataggtctctttgcataatgtttatctatgaagctctttgttccca 745
Query: 546 tctgctatatgaggaaacctctctgattatgtctcaataagacaccaatctatgagtata 605
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 746 tctgctatatgaggaaacctctctgattatgtctcaataagacaccaatctatgagtata 805
Query: 606 gcagaatatcttagggtcactttattggtacttttaaaacatcttttta 654
||||||||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 806 gcagaatatcttagggtcactttattgttatttttaaaacatcttttta 854
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 654
Length of database: 1054
Length adjustment: 10
Effective length of query: 644
Effective length of database: 1044
Effective search space: 672336
Effective search space used: 672336
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no501_l17.g1 MSMg01no501_l17.g1 CHROMAT_FILE:
MSMg01no501_l17.g1 PHD_FILE: MSMg01no501_l17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:28:37 2005
(544 letters)
>mm_chr12_49466718_49467661
Length = 944
Score = 572 bits (296), Expect = e-167
Identities = 308/312 (98%)
Strand = Plus / Minus
Query: 1 cataggtgtagcatccctgtcattattcatcccactgaataccattgagattgttcaaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 cataggtgtagcatccctgtcattattcatcccactgaataccattgagattgttcaaca 254
Query: 61 attagtgatccttgagctcagttatgtcctctacctgtatgttaggaataatgggggtgg 120
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 253 attagtgatccttgagctcagttatgtcctctacctgtatgttagaaataatgggggtgg 194
Query: 121 gggtgatatcctggaaatgatttcaaaagagatgagtcacatctggtaaggggagttttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 gggtgatatcctggaaatgatttcaaaagagatgagtcacatctggtaaggggagttttc 134
Query: 181 taactagtagagagtagaggggaggagagttacctagtcaccaccagtctctaaagtcaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 taactagtagagagtagaggggaggagagttacctagtcaccaccagtctctaaagtcaa 74
Query: 241 tttagttaaggtctcttttgaggttctgttcattctttttacctgtcttgaactctggga 300
|||||||||||||| |||||| |||||||||||||||||||||||||||||| |||||||
Sbjct: 73 tttagttaaggtcttttttgacgttctgttcattctttttacctgtcttgaattctggga 14
Query: 301 catataagcata 312
||||||||||||
Sbjct: 13 catataagcata 2
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 544
Length of database: 944
Length adjustment: 10
Effective length of query: 534
Effective length of database: 934
Effective search space: 498756
Effective search space used: 498756
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
