Query= MSMg01no502_h09.b1 MSMg01no502_h09.b1 CHROMAT_FILE:
MSMg01no502_h09.b1 PHD_FILE: MSMg01no502_h09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:29:30 2005
(634 letters)
>mm_chr12_54307293_54308326
Length = 1034
Score = 1156 bits (598), Expect = 0.0
Identities = 625/634 (98%)
Strand = Plus / Plus
Query: 1 gtctggtccaaaaatttagctaattaagcacatctgtatttaaatgtaatagaaaggggc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gtctggtccaaaaatttagctaattaagcacatctgtatttaaatgtaatagaaaggggc 260
Query: 61 caaagaagtagaaaagtccatggagacctcacagatgaaggggattcccttgttcttgtg 120
||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||
Sbjct: 261 caaagaagtagaaaagtccatggggacctcacggatgaaggggattcccttgttcttgtg 320
Query: 121 ctccttggaaaatgaggaactattcaagtgtgagaaatgaatcctatattagagtagtgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctccttggaaaatgaggaactattcaagtgtgagaaatgaatcctatattagagtagtgt 380
Query: 181 gaaagttcaacctctgacagaacaaaacctgacaacagtcacatggccttctgcctctgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gaaagttcaacctctgacagaacaaaacctgacaacagtcacatggccttctgcctctgc 440
Query: 241 cattgttttttttgttgcctgcatctttcctggcaaacctgcttctttccctttccactg 300
|||||| | |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cattgtctgccttgttgcctgcatctttcctggcaaacctgcttctttccctttccactg 500
Query: 301 tccttgccgtgttccttaatcttgagcctggtaggactgtgtgtgttctcatggtctttg 360
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tccttgccatgttccttaatcttgagcctggtaggactgtgtgtgttctcatggtctttg 560
Query: 361 gaatacaggtcccaggtcaggaggaacctctgcagtgtttaaacagggtggtcctcactc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gaatacaggtcccaggtcaggaggaacctctgcagtgtttaaacagggtggtcctcactc 620
Query: 421 tagtcccttcccatgagcccttaagctttcactttgttttctaggtgcatcgatactgac 480
||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||
Sbjct: 621 tagtcccttcccatgagcccttaagctttcactttgttttctaggtgcatcaatgctgac 680
Query: 481 atttaatatctagtgatcaattatttgaaaagagttgctgtttgacatctcacaagctga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 atttaatatctagtgatcaattatttgaaaagagttgctgtttgacatctcacaagctga 740
Query: 541 tctgatgtctttaaaaagcagcttcatctgagctgatagaatcgaaagtcacggcttcag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tctgatgtctttaaaaagcagcttcatctgagctgatagaatcgaaagtcacggcttcag 800
Query: 601 tagtgtttttcttaatttaattttcatgaaatca 634
||||||||||||||||||||||||||||||||||
Sbjct: 801 tagtgtttttcttaatttaattttcatgaaatca 834
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 634
Length of database: 1034
Length adjustment: 10
Effective length of query: 624
Effective length of database: 1024
Effective search space: 638976
Effective search space used: 638976
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no502_h09.g1 MSMg01no502_h09.g1 CHROMAT_FILE:
MSMg01no502_h09.g1 PHD_FILE: MSMg01no502_h09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:29:30 2005
(536 letters)
>mm_chr12_54348008_54348937
Length = 930
Score = 644 bits (333), Expect = 0.0
Identities = 385/407 (94%), Gaps = 9/407 (2%)
Strand = Plus / Minus
Query: 1 caaacaccaaggaaacaaaaagagaaaacacgtgcatttatttcctcgcgccttcctgtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 caaacaccaaggaaacaaaaagagaaaacacgtgcatttatttcctcgcgccttcctgtt 484
Query: 61 acttcacattgtgacgcctgcctttcattagggggtgaagagagatccttacagtttgga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 acttcacattgtgacgcctgcctttcattagggggtgaagagagatccttacagtttgga 424
Query: 121 tgcgcctttttagtgagacttgcactgggtttcactgagctagggttgggggagtgggag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 tgcgcctttttagtgagacttgcactgggtttcactgagctagggttgggggagtgggag 364
Query: 181 ttgattgtttccctccatccctccccaggacccgggttgcccactttttcccctgtcttc 240
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 363 ttgattgtttccctccatccctccccaggacccgggttgcccacttttccccctgtcttc 304
Query: 241 ttttttgtgagcaggagcggagatgcgagaagcaggcggatgctgcccttgagggacaca 300
| | |||||||||||| |||||||||||||||||||||||| ||||||||||||||||
Sbjct: 303 tggctggtgagcaggagcagagatgcgagaagcaggcggatgcagcccttgagggacaca 244
Query: 301 gagcttgggctctgctaatgtcccacactcaaagcccctgcccagcttatctgctgctgc 360
||||| |||||||||||||||||||||||||||||||||||||| | ||||||||
Sbjct: 243 gagct------ctgctaatgtcccacactcaaagcccctgcccagcttagcggctgctgc 190
Query: 361 tgctgctgctgctgctgctgc---tgctgctgctgctgctgctgctg 404
||||||||||||| || |||| |||||||||| ||||||| ||||
Sbjct: 189 tgctgctgctgctactcctgcaactgctgctgctactgctgcggctg 143
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 41
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 1
Length of query: 536
Length of database: 930
Length adjustment: 10
Effective length of query: 526
Effective length of database: 920
Effective search space: 483920
Effective search space used: 483920
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
