Query= MSMg01no505_c18.b1 MSMg01no505_c18.b1 CHROMAT_FILE:
MSMg01no505_c18.b1 PHD_FILE: MSMg01no505_c18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:33:01 2005
(638 letters)
>mm_chr12_58397031_58398064
Length = 1034
Score = 911 bits (471), Expect = 0.0
Identities = 501/513 (97%), Gaps = 4/513 (0%)
Strand = Plus / Minus
Query: 5 gaattcatgatcttcctgtcctaccttttccattgttaggatttcaagtatgctccacat 64
|||||||||||| | |||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 509 gaattcatgatcctactgtcctaccttttccattgttaggatttcaagtatactccacat 450
Query: 65 gactggctattaacaaattaaccttcattaatttccctaccggtaaagtagaaaaatatc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 gactggctattaacaaattaaccttcattaatttccctaccggtaaagtagaaaaatatc 390
Query: 125 cccctcaaaaagtacttaggatcagtaaattatagaagcctcttagcaaagtattaacac 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 cccctcaaaaagtacttaggatcagtaaattatagaagcctcttagcaaagtattaacac 330
Query: 185 agaacatagactcaataaatattaattatttcctttaaatcttctctgtgaacagttaca 244
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 329 agaacatagactcaataaat----attatttcctttaaatcttctctgtgaacagttaca 274
Query: 245 ttctctatttttatttccaaatcttctcatcttttggtgaaatgagtacaaatgacatca 304
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 273 ttctctatttttatttccaaatcttctcatcttttggtgaaatgagtacaaatgacataa 214
Query: 305 aattcaaacttaaaattctattttaatttaattaatttttcttaaatattaagaaaagca 364
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 213 aattcaaacttaaaattctattttaatttaattaatttttcttaaatgttaagaaaagca 154
Query: 365 aaaattatatttattgtcctaatattaatccaacttttatattggacaaccactctggaa 424
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 153 aaaattatatttattgtcttaatattaatccaacttttatattggacaaccactctggaa 94
Query: 425 attagtctggcggttcctcagaaaattggacatagtactaccagaagatccagcaatacc 484
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 93 atcagtctggcggttcctcagaaaattggacatagtactaccagaagatccagcaatacc 34
Query: 485 tttcctgggcatatacccagaagatgttccaac 517
||||| |||||||||||||||||||||||||||
Sbjct: 33 tttcccgggcatatacccagaagatgttccaac 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 638
Length of database: 1034
Length adjustment: 10
Effective length of query: 628
Effective length of database: 1024
Effective search space: 643072
Effective search space used: 643072
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no505_c18.g1 MSMg01no505_c18.g1 CHROMAT_FILE:
MSMg01no505_c18.g1 PHD_FILE: MSMg01no505_c18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:33:01 2005
(637 letters)
>mm_chr12_58207803_58208839
Length = 1037
Score = 1139 bits (589), Expect = 0.0
Identities = 625/637 (98%)
Strand = Plus / Plus
Query: 1 atctgctctctgggatggtctcttgcaaagtttgccgccggatggcataatcactaagta 60
|||||||||||||||||||||||||||||||||||| ||||||| |||||| ||||||||
Sbjct: 201 atctgctctctgggatggtctcttgcaaagtttgcctccggatgacataattactaagta 260
Query: 61 tcttagatggccagcttaaaacactaaggagtggggctcagtagaaattagaagtgtgtt 120
||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 261 tcttagatgaccagcttaaaacactaaggagtggggctcagtagaaattagaagtatgtt 320
Query: 121 gagaaagggttcaagactcaggagtgaataagcaacaggctccattccgggaagctctga 180
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 321 gagaaagggttcaagactcaggagtgaataagcagcaggctccattccgggaagctctga 380
Query: 181 agaacagtctcaagttcaagtgctgctaatgagatccagcagtgggcaaacaaggttaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agaacagtctcaagttcaagtgctgctaatgagatccagcagtgggcaaacaaggttaga 440
Query: 241 aggctttttgccagagaaatcatttagctaaaagatgcattttacttctctctttttata 300
|||| || |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aggcattgggccagagaaatcatttagctaaaagatgcattttacttctctctttttata 500
Query: 301 cagttgactgaatatgtgtgctctcctaaaagtcatatgttaaaataactaacctcaaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cagttgactgaatatgtgtgctctcctaaaagtcatatgttaaaataactaacctcaaaa 560
Query: 361 gggcagtggtgagacctgatttaggtcacaaggaactagagtcctcatgattaggatacc 420
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 561 gggcagtggtgagacctgatttaggccacaaggaactagagtcctcatgattaggatacc 620
Query: 421 tcaaagtctagttttctttctggaagatagccttcagcaaacactggcacccagacctca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tcaaagtctagttttctttctggaagatagccttcagcaaacactggcacccagacctca 680
Query: 481 gacttctgttctctagaacggtaagatctgcatttctcttaaaccttctagattacggcg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gacttctgttctctagaacggtaagatctgcatttctcttaaaccttctagattacggcg 740
Query: 541 tttttgttacagcatcttgagctgacgaagatttttcttcagaataattataacaatgaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tttttgttacagcatcttgagctgacgaagatttttcttcagaataattataacaatgaa 800
Query: 601 gcatagcggggtacaaactacgctgaactgaggtaga 637
||||||||||||||||||||||||||| |||| ||||
Sbjct: 801 gcatagcggggtacaaactacgctgaagtgagataga 837
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 637
Length of database: 1037
Length adjustment: 10
Effective length of query: 627
Effective length of database: 1027
Effective search space: 643929
Effective search space used: 643929
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
