Query= MSMg01no505_p16.b1 MSMg01no505_p16.b1 CHROMAT_FILE:
MSMg01no505_p16.b1 PHD_FILE: MSMg01no505_p16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:34:00 2005
(647 letters)
>mm_chr12_55313591_55314637
Length = 1047
Score = 1203 bits (622), Expect = 0.0
Identities = 628/630 (99%)
Strand = Plus / Minus
Query: 17 tctctgtctctgtctctctctctgtctctctctctctgtctctctgttcccacacataca 76
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 735 tctctgtctctgtctctctctctgtctctctctctctgtctctctgttcccacacataca 676
Query: 77 tgcacaagtgttcatgtgtgtttgcacaggtgtgttatgtgtgcttgtggcactcagagg 136
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 tgcacaagtgttcatgtgtgtttgcacaggtgtgttatgtgtgcttgtggcactcagagg 616
Query: 137 tcaatgttggatgtttttctcagtagcttctccaccttatactttgaaacagggtctctc 196
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 tcaatgttggatgtttttctcagtagcttctccaccttatactttgaaacagggtctctc 556
Query: 197 actgaggccagccagaaagcctcagggaccttcaatctctgtttccccagggttgggatt 256
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 actgaggccagccagaaagcctcagggaccttcaatctctgtttccccagggttgggatt 496
Query: 257 atgtgggttctggggttcagaaatcaggtctctatgcttctgccagtttagtgaatctcc 316
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 495 atgtgggttctggggttcagaactcaggtctctatgcttctgccagtttagtgaatctcc 436
Query: 317 tcaatcccgatttagagctttgtgtgtgactgatggctgctagcagaatactgacttccg 376
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 435 tcaatcccgatttagagctttgtgtgtgactgatgactgctagcagaatactgacttccg 376
Query: 377 cagctaggatgagggtcttaatgcctacacccacagtgacacacctactccaacaaggcc 436
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 cagctaggatgagggtcttaatgcctacacccacagtgacacacctactccaacaaggcc 316
Query: 437 acacctactccaacagtgccataccctctaatagcgccagtccctgggccaagcataaac 496
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 acacctactccaacagtgccataccctctaatagcgccagtccctgggccaagcataaac 256
Query: 497 aatctagcacagctggcattaccagaaagtatccactatggctggcctcgaattttaact 556
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 aatctagcacagctggcattaccagaaagtatccactatggctggcctcgaattttaact 196
Query: 557 tcagggatttcacaaaaagaggaggactacatctaacctttgccccgggaacgaggttgg 616
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 tcagggatttcacaaaaagaggaggactacatctaacctttgccccgggaacgaggttgg 136
Query: 617 ggtttctgtgaattgcacggtgagtggagt 646
||||||||||||||||||||||||||||||
Sbjct: 135 ggtttctgtgaattgcacggtgagtggagt 106
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 38
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 647
Length of database: 1047
Length adjustment: 10
Effective length of query: 637
Effective length of database: 1037
Effective search space: 660569
Effective search space used: 660569
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no505_p16.g1 MSMg01no505_p16.g1 CHROMAT_FILE:
MSMg01no505_p16.g1 PHD_FILE: MSMg01no505_p16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:34:01 2005
(579 letters)
>mm_chr12_55125717_55126696
Length = 980
Score = 1036 bits (536), Expect = 0.0
Identities = 569/580 (98%), Gaps = 1/580 (0%)
Strand = Plus / Plus
Query: 1 tcctgcaatagaatcagagtacctcagcagtcagcctccctcctgtagtcttgagcttgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcctgcaatagaatcagagtacctcagcagtcagcctccctcctgtagtcttgagcttgt 260
Query: 61 gagataggcagaaaaatcagacacattctgtgcctcaaccaagggaaaacagccagaggc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gagataggcagaaaaatcagacacattctgtgcctcaaccaagggaaaacagccagaggc 320
Query: 121 acaaggacaacgcagtccttgagggagggggactgacactgattaggtgagagaggagga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acaaggacaacgcagtccttgagggagggggactgacactgattaggtgagagaggagga 380
Query: 181 ggatgggatgggagaggtagctttgggcttgagtgaccaagggcaaatgacacttaattc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 381 ggatgggatgggagaggtagctttgggcttgagtgaccaagggcaaatgacacttaactc 440
Query: 241 attttttatttttt-ctcaatgaatacatgttatttctgccaatgaaaaggaaggtagaa 299
|| ||||||||| |||||||||||||||||||||||||||||||||||||| | ||||
Sbjct: 441 atgacttatttttttctcaatgaatacatgttatttctgccaatgaaaaggaaagcagaa 500
Query: 300 aggtagcataaaccaggggaaggagacaggctggagcaggtgagaacaggcagatgcagg 359
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 501 aggtagcataaaccaggggaaggagacagggtggagcaggtgagaacaggcagatgcagg 560
Query: 360 aggaaagccacgggtgatgaacaggctctgaggtttgaggctcagtcatcacaagtcttc 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aggaaagccacgggtgatgaacaggctctgaggtttgaggctcagtcatcacaagtcttc 620
Query: 420 ccatgataagctaaatgatctgaattctatcccaccagaagtgaccgagacttttgtcac 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ccatgataagctaaatgatctgaattctatcccaccagaagtgaccgagacttttgtcac 680
Query: 480 agtgagattatcgacagcactttataccgcatggtgctgtactgtaatgaagtattaaat 539
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 681 agtgaggttatcgacagcactttataccgcatggtgctgtactgtaatgaagtattcaac 740
Query: 540 ttccttgcttcttttggttcttccagggattctaaaggag 579
||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ttccttgcttcttttggttcttccagggattctaaaggag 780
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 579
Length of database: 980
Length adjustment: 10
Effective length of query: 569
Effective length of database: 970
Effective search space: 551930
Effective search space used: 551930
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
