Query= MSMg01no510_f16.b1 MSMg01no510_f16.b1 CHROMAT_FILE:
MSMg01no510_f16.b1 PHD_FILE: MSMg01no510_f16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:39:55 2005
(421 letters)
>mm_chr12_84715641_84716458
Length = 818
Score = 781 bits (404), Expect = 0.0
Identities = 415/420 (98%), Gaps = 3/420 (0%)
Strand = Plus / Plus
Query: 1 gacaggttagagcgatgtcctcatcaagcgctgaccccaggccactaaagcctgcaatca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gacaggttagagcgatgtcctcatcaagcgctgaccccaggccactaaagcctgcaatca 260
Query: 61 gaaacagaaaggcgagacgttgctgggctcgggaaaagccttctagtctggaacaccagc 120
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaaacagaaaggagagacgttgctgggctcgggaaaagccttctagtctggaacaccagc 320
Query: 121 tgctaggctctagagggcttcgtgaggggcgagaggtccctttttggtcacaaatggaca 180
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 321 tgctaggctctagagggcttcgtgagggtcgagaggtccctttttggtcacaaatggaca 380
Query: 181 gaggggtccagtccagctctaaaaactggatatccagggactttttttgagcatgtctat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gaggggtccagtccagctctaaaaactggatatccagggactttttttgagcatgtctat 440
Query: 241 agggagatgaagtccagggccaggagggccctctgctcctcattcaacctcctgttccag 300
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 441 agggagatgaagtccagggccaggagggccctctgctcctcattcaacct---gttccag 497
Query: 301 agaacctggtcactggctcaacttcctgtcactgccgtgagatcatgctcaggtccagcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 agaacctggtcactggctcaacttcctgtcactgccgtgagatcatgctcaggtccagcc 557
Query: 361 ctctaagcagacactcgtcctgattgtcccacaggtcctgtgctcacaactaaggacatg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 ctctaagcagacactcgtcctgattgtcccacaggtcctgtgctcacaactaaggacatg 617
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 421
Length of database: 818
Length adjustment: 9
Effective length of query: 412
Effective length of database: 809
Effective search space: 333308
Effective search space used: 333308
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no510_f16.g1 MSMg01no510_f16.g1 CHROMAT_FILE:
MSMg01no510_f16.g1 PHD_FILE: MSMg01no510_f16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:39:55 2005
(623 letters)
>mm_chr12_84851524_84852546
Length = 1023
Score = 688 bits (356), Expect = 0.0
Identities = 374/380 (98%)
Strand = Plus / Minus
Query: 1 tcgctgttacagaagggagctgtacctctgggagaaactgaactggagtcgagacactaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tcgctgttacagaagggagctgtacctctgggagaaactgaactggagtcgagacactaa 321
Query: 61 agtgaggtcacaggtgtattctgtgcccagatatctgcatgtgtcccgcttgatgctgca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 agtgaggtcacaggtgtattctgtgcccagatatctgcatgtgtcccgcttgatgctgca 261
Query: 121 aatgtgtgcaccatccaggtttctgttctctcctccccactcccagcacccctcccccac 180
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 aatgtgtgcaccatccgggtttctgttctctcctccccactcccagcacccctcccccac 201
Query: 181 cccagtctggcttctgagaagattcagaggcaggaacctcaccgcagctttaagtgctat 240
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 200 cccagtctggcttctgagaagattcagaggcaggaacctcacagcagctttaagtgctat 141
Query: 241 ggaatttttttcctaaatactcttttctgaaaggaatctgagcttttctgctgttttcta 300
|||| | |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 140 ggaaagtggttcctaaatactcttttctgaaaggaatctgagcttttctgctgttttcta 81
Query: 301 atgaccgattccagggttaaggcagagagattctagggtagttattctgaggaggctccc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80 atgaccgattccagggttaaggcagagagattctagggtagttattctgaggaggctccc 21
Query: 361 actggcaaaaattgggaata 380
||||||||||||||||||||
Sbjct: 20 actggcaaaaattgggaata 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 623
Length of database: 1023
Length adjustment: 10
Effective length of query: 613
Effective length of database: 1013
Effective search space: 620969
Effective search space used: 620969
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
