Query= MSMg01no511_g22.b1 MSMg01no511_g22.b1 CHROMAT_FILE:
MSMg01no511_g22.b1 PHD_FILE: MSMg01no511_g22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:41:18 2005
(596 letters)
>mm_chr12_83867077_83868072
Length = 996
Score = 866 bits (448), Expect = 0.0
Identities = 461/470 (98%), Gaps = 8/470 (1%)
Strand = Plus / Minus
Query: 1 attcaactctgagcaaagagccagatctttcatttctctgagctttatggtaattttggc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 attcaactctgagcaaagagccagatctttcatttctctgagctttatggtaattttggc 403
Query: 61 atcagaattctctggaacatttacagctttaaatattctgttccattgaactaccagatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 atcagaattctctggaacatttacagctttaaatattctgttccattgaactaccagatc 343
Query: 121 cataatttggggaacaagaagtatttttaaggcaataataataatgacttagggatcaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 cataatttggggaacaagaagtatttttaaggcaataataataatgacttagggatcaga 283
Query: 181 catcagtctgatattaagttaccaacttttagtcaataaaagttatttaaaagtaaatca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 catcagtctgatattaagttaccaacttttagtcaataaaagttatttaaaagtaaatca 223
Query: 241 tgggtataaaagttaattgtgaccaggtatagtggtgcacacctttagtcccagcacttg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 222 tgggtataaaagttaattgtgaccaggtatagtggtgcacacctttagtcccagcacttg 163
Query: 301 agaggcagaggcagactgatctctgtgaattcaaggccagcctgttctacatggtgagtt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 162 agaggcagaggcagactgatctctgtgaattcaaggccagcctgttctacatggtgagtt 103
Query: 361 caaagccagccagagctacatagttagaccctgcctcaaacaaacaaacaaacaaacaaa 420
|||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 102 caaagccagccagagctacatagttagaccctgcct--------caaacaaacaaacaaa 51
Query: 421 caaacaaagagattgtgttttgcttcataaaaatcttttttccattttca 470
||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 50 caaacaaagaggttgtgttttgcttcataaaaatcttttttccattttca 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 596
Length of database: 996
Length adjustment: 10
Effective length of query: 586
Effective length of database: 986
Effective search space: 577796
Effective search space used: 577796
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no511_g22.g1 MSMg01no511_g22.g1 CHROMAT_FILE:
MSMg01no511_g22.g1 PHD_FILE: MSMg01no511_g22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:41:18 2005
(492 letters)
>mm_chr12_83701351_83702241
Length = 891
Score = 874 bits (452), Expect = 0.0
Identities = 482/492 (97%), Gaps = 1/492 (0%)
Strand = Plus / Plus
Query: 1 tccatgggccccgggagctctttgagcagcactaattgtttttgactggttccctgctgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tccatgggccccgggagctctttgagcagcactaattgtttttgactggttccctgctgt 260
Query: 61 agcttggctttaagtcaaactccagcctctcctgagccccgagtgctgatctctttttcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agcttggctttaagtcaaactccagcctctcctgagccccgagtgctgatctctttttcc 320
Query: 121 cagttgtttttttttcaaaagaatggagccccgtctgtgtttccgtgtccatccagcccc 180
|||||| |||| |||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 321 cagttg-ttttctttcaaaagaatggagccccgtctgtgtttccatgtccatccagcccc 379
Query: 181 ctttctatctctgaagaggtattttcttgaagataattcggggtcatcttcttcacagga 240
||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||
Sbjct: 380 ctttctatctctgaagaggcattttcttgaagataatacggggtcatcttcttcacagga 439
Query: 241 gaaatgtgtaggtagatgaacatcttacttttttccaggttacacccactttgcttctat 300
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 440 gaaatgtgtaggtagatgaacatcttacttttttccaggttaaacccactttgcttctat 499
Query: 301 ctgttctgcttctgaatacttttatgtttgcaaacaatcaggtggctctccttccagagc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 500 ctgttctgcttctgaatacttttatgtttgcaaacaatcaggtggctctcctttcagagc 559
Query: 361 actgtctaaatctgtctccagctgttgtaacagtgtctgatgggggccttcaagctgcat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 actgtctaaatctgtctccagctgttgtaacagtgtctgatgggggccttcaagctgcat 619
Query: 421 cagaacaatgtggaagaactagaaaatatgtcacatgcacacacactctcacacacacac 480
||||||||||||||||||||||||||||||||||||||| |||||| | |||||||||||
Sbjct: 620 cagaacaatgtggaagaactagaaaatatgtcacatgcatacacacacacacacacacac 679
Query: 481 acacacacacac 492
||||||||||||
Sbjct: 680 acacacacacac 691
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 492
Length of database: 891
Length adjustment: 10
Effective length of query: 482
Effective length of database: 881
Effective search space: 424642
Effective search space used: 424642
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
