Query= MSMg01no512_e23.b1 MSMg01no512_e23.b1 CHROMAT_FILE:
MSMg01no512_e23.b1 PHD_FILE: MSMg01no512_e23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:42:25 2005
(173 letters)
>mm_chr12_12540875_12541447
Length = 573
Score = 259 bits (134), Expect = 6e-74
Identities = 155/162 (95%)
Strand = Plus / Plus
Query: 5 gaattccagttcctatagtcacatcacttaaaatactttatctgtgactttaaatatctg 64
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccagttccaatagtcacatcacttaaaatactttatctgtgactttaaatatctg 264
Query: 65 gatcatattcctctagttatcacaaataaattactgctacattagagaaggaaaagaaaa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gatcatattcctctagttatcacaaataaattactgctacattagagaaggaaaagaaaa 324
Query: 125 gaaaagaaaagaaaagagaggggaggggaggggaggggaggg 166
||||||||||||||||| | || |||| |||| |||| ||||
Sbjct: 325 gaaaagaaaagaaaagaaaaggaagggaagggaagggaaggg 366
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 173
Length of database: 573
Length adjustment: 8
Effective length of query: 165
Effective length of database: 565
Effective search space: 93225
Effective search space used: 93225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no512_e23.g1 MSMg01no512_e23.g1 CHROMAT_FILE:
MSMg01no512_e23.g1 PHD_FILE: MSMg01no512_e23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:42:25 2005
(268 letters)
>mm_chr12_12714915_12715578
Length = 664
Score = 373 bits (193), Expect = e-108
Identities = 214/223 (95%), Gaps = 4/223 (1%)
Strand = Plus / Minus
Query: 1 acaggcatataccagtaagtctgatttcttttcttttctttttttaaatctgtctttctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 acaggcatataccagtaagtctgatttcttttcttttctttttttaaatctgtctttctc 452
Query: 61 tccctgactctccctcttcctctctttcttccatgctgacactgccttaaaactcgccat 120
||||||||||||| |||||||||||||||||||||||||||||| |||||||||| ||||
Sbjct: 451 tccctgactctccttcttcctctctttcttccatgctgacactgacttaaaactcaccat 392
Query: 121 ggagctgaggctgcttttcctcttccgatcgatcctctaccaggaagtgctgggatcctc 180
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 391 ggagctgaggctgcttttcctcttc----cgatcctctaccaggaagtgctgggatcctc 336
Query: 181 taccaggaagtgctgggatcctctatcaggaagtactgggatc 223
||||||||||||||||||||||||| |||||||| ||||||||
Sbjct: 335 taccaggaagtgctgggatcctctaccaggaagtgctgggatc 293
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 42
Number of extensions: 22
Number of successful extensions: 22
Number of sequences better than 10.0: 1
Number of HSP's gapped: 21
Number of HSP's successfully gapped: 1
Length of query: 268
Length of database: 664
Length adjustment: 9
Effective length of query: 259
Effective length of database: 655
Effective search space: 169645
Effective search space used: 169645
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
