XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCACTT
ATAACTGGATATCAGGTATGGCTTTGGAACATGCTAATAATGCCAGAAAT
TATTTCTCTCAATCAAGAGAATGTTTACCCCATTAACATTCACACTACTA
TTACGCCGTTGACACATTTTTCCTAGCATGTCTTTTGATATAGCAAAGGA
GCTAATGTCAATGGGGAGTTGCTGAGGAGGAATGTGGGAACATTAGAGCA
TAGTCATTCATAGGTTATCCTTTACCTACTGGGTACACTGCACACATGCA
AAATTTGCAAATTCGATGTAATAGGTTATTTTTATGGCCTAAAATTAGGA
GAAATGTAGGAGATTTGTTGGGCTCAGAAAAATAGGAGCAGAAAAGAGGG
TTAGAGGATGAATATTACCAATACAAATTATATACATTCATGGTATTTAA
AAAAGAAAACACCTATAACTATCAACAGCTACCAACATGTGAAAAAACTA
AGGAATGAACCTTCCTTAGAATCACCACAGGGCCTACTGACGTTATTTAG
ACCTCATACATGCGAGAGACTGCTTCAGCCCTCATAACTGAACTAGTAAT
ATTTTATAGGAATAGTCAGTCACTTTTAACTTAGTTCCTATAATCATAAG
TGCTGAATCCAAACCACTAATCCGTTTTTTATCTTTCTCTCATGAATTTC
TTTTATTGTTCTGCAAAATCCTTTTCATCCCTTTAAGCCATATACACTAG
AATGTTCTAGGAACTCATCAT

TTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXTTTATATATTTTGGATATTTGCCCTTTATGAGAT
GTAGAATTAGTTACAATTTTTTTCCAAATGTAGGCAAATGATTTGTCTAA
TTAACAGTGTCCTTTGCATTACAGAAGCCTTTAAGTTTCATAAGGTCTCA
TTAGAGCCTGAGCCATTGGTGTTTTGTTCAGGAAATTTTCCAAATGCCAA
TGAGTGTGAGGTTTTTTTTCCCACTTTTTCTTCTATTAGATTCAGTGTGT
CTGGTTTTACGTGGAGGTCTTTGAACCACTTGGACTTGAGCTTTGTCTAA
GGTGACAAATACGGATCTATTTATATTCTTCTACATACACACCACCAGTT
AGACCAGCACCATGTAGTCAAGGTTCATTCTTTTTTCCACTGCATGTTTT
TGCCTTCTTCATCAAAGATCAAGTGACCATAGGTGTGTTCAATTCTATTC
CATTGATCGACCTGTCTCTAAAACAATGCCATGCAGTTTTTAATCACTGT
TGCTTTGTAGTATAGCTTCAGGTGAGGAGTGGTGACCCTCAAGAACTTCT
TTCATTCTTGAGAATCATTTTAGCTACCCAGAGTTTTTATTTTTGCATAT
GAATTTGAGAATTGCTCTCTTTGTTTGTGTTGGAATTTTGATAATGAATG
CATTGAATCTACATTGCTTTTGGGAAGATAGCCTTTTTCCTATGTTAATC
CCTACTAACCATGAGCATG

Query= MSMg01no513_n19.b1 MSMg01no513_n19.b1 CHROMAT_FILE:
MSMg01no513_n19.b1 PHD_FILE: MSMg01no513_n19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:44:31 2005
         (653 letters)



>mm_chr12_95739955_95741007
          Length = 1053

 Score = 1243 bits (643), Expect = 0.0
 Identities = 646/647 (99%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcacttataactggatatcaggtatggctttggaacatgctaataatgccagaaat 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 851 gaattcacttataactggatatcaggtatggctttggaacatgctaataatgccagaaat 792

                                                                       
Query: 65  tatttctctcaatcaagagaatgtttaccccattaacattcacactactattacgccgtt 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 791 tatttctctcaatcaagagaatgtttaccccattaacattcacactactattacgccgtt 732

                                                                       
Query: 125 gacacatttttcctagcatgtcttttgatatagcaaaggagctaatgtcaatggggagtt 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 731 gacacatttttcctagcatgtcttttgatatagcaaaggagctaatgtcaatggggagtt 672

                                                                       
Query: 185 gctgaggaggaatgtgggaacattagagcatagtcattcataggttatcctttacctact 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 gctgaggaggaatgtgggaacattagagcatagtcattcataggttatcctttacctact 612

                                                                       
Query: 245 gggtacactgcacacatgcaaaatttgcaaattcgatgtaataggttatttttatggcct 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 gggtacactgcacacatgcaaaatttgcaaattcgatgtaataggttatttttatggcct 552

                                                                       
Query: 305 aaaattaggagaaatgtaggagatttgttgggctcagaaaaataggagcagaaaagaggg 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 aaaattaggagaaatgtaggagatttgttgggctcagaaaaataggagcagaaaagaggg 492

                                                                       
Query: 365 ttagaggatgaatattaccaatacaaattatatacattcatggtatttaaaaaagaaaac 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 ttagaggatgaatattaccaatacaaattatatacattcatggtatttaaaaaagaaaac 432

                                                                       
Query: 425 acctataactatcaacagctaccaacatgtgaaaaaactaaggaatgaaccttccttaga 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 acctataactatcaacagctaccaacatgtgaaaaaactaaggaatgaaccttccttaga 372

                                                                       
Query: 485 atcaccacagggcctactgacgttatttagacctcatacatgcgagagactgcttcagcc 544
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 371 atcaccacagggcctactgacgttatttagacctcatatatgcgagagactgcttcagcc 312

                                                                       
Query: 545 ctcataactgaactagtaatattttataggaatagtcagtcacttttaacttagttccta 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 ctcataactgaactagtaatattttataggaatagtcagtcacttttaacttagttccta 252

                                                          
Query: 605 taatcataagtgctgaatccaaaccactaatccgttttttatctttc 651
           |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 taatcataagtgctgaatccaaaccactaatccgttttttatctttc 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 653
Length of database: 1053
Length adjustment: 10
Effective length of query: 643
Effective length of database: 1043
Effective search space:   670649
Effective search space used:   670649
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)