Query= MSMg01no515_m22.b1 MSMg01no515_m22.b1 CHROMAT_FILE:
MSMg01no515_m22.b1 PHD_FILE: MSMg01no515_m22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:47:17 2005
(645 letters)
>mm_chr3_73785127_73786169
Length = 1043
Score = 1189 bits (615), Expect = 0.0
Identities = 634/641 (98%), Gaps = 2/641 (0%)
Strand = Plus / Plus
Query: 5 gaattccatagtgagtagagacagctaagacagaaatttcaagtgcttcatcatcacttt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccatagtgagtagagacagctaagacagaaatttcaagtgcttcatcatcacttt 264
Query: 65 ctagtcttggttcttagcaatggattatacatcagggctaatataggcagtttgggaaaa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ctagtcttggttcttagcaatggattatacatcagggctaatataggcagtttgggaaaa 324
Query: 125 tattttatcaataaaagataaggtcatagcaagagaattagagtaggtctaacgtattaa 184
|| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tactttatcaatagaagataaggtcatagcaagagaattagagtaggtctaacgtattaa 384
Query: 185 tcactctgagtgattattatataagcataagaatgatgtaagccacaggaagccctgttc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tcactctgagtgattattatataagcataagaatgatgtaagccacaggaagccctgttc 444
Query: 245 tcttccctctcctgctcttctttccaaaatgaataataaatatttagtggacagtggatt 304
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tcttccttctcctgctcttctttccaaaatgaataataaatatttagtggacagtggatt 504
Query: 305 tagagaaagaaaagcaagtatatgacatataaaattagatccattgtgtgcaattccttc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tagagaaagaaaagcaagtatatgacatataaaattagatccattgtgtgcaattccttc 564
Query: 365 gagtttgtgatgaaaaaaaaatctatcttaatatcataaacagtttgacagacttccata 424
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gagtttgtgatgaaaaaaa--tctatcttaatatcataaacagtttgacagacttccata 622
Query: 425 attcaccaaacacctggtcagaactttttcacaagtgaggaaaatatttattcaaattac 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 attcaccaaacacctggtcagaactttttcacaagtgaggaaaatatttattcaaattac 682
Query: 485 ttaaatattttcaagcatgaaagatcaaacaaattatttctccctgtgcaatttaaatag 544
|||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||
Sbjct: 683 ttaaatattttcaagcatgaaaaatcaaacaaattatttctccctgtgcaagttaaatag 742
Query: 545 catgagaattctgtacctcagagatctagtggtgcatgatgctataaaaacattctgttc 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 catgagaattctgtacctcagagatctagtggtgcatgatgctataaaaacattctgttc 802
Query: 605 tatgcatgattaccatctacacctatcttaattctttttat 645
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 803 tatgcatgattaccatctacacctatcttaattctttttat 843
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 645
Length of database: 1043
Length adjustment: 10
Effective length of query: 635
Effective length of database: 1033
Effective search space: 655955
Effective search space used: 655955
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no515_m22.g1 MSMg01no515_m22.g1 CHROMAT_FILE:
MSMg01no515_m22.g1 PHD_FILE: MSMg01no515_m22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:47:17 2005
(659 letters)
>mm_chr12_46929598_46930656
Length = 1059
Score = 1266 bits (655), Expect = 0.0
Identities = 658/659 (99%)
Strand = Plus / Plus
Query: 1 attcccaaggagagatggtaagttaagagtataagcatctacggtagcccaaaagagaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attcccaaggagagatggtaagttaagagtataagcatctacggtagcccaaaagagaag 260
Query: 61 taaattgggcttcctagacattaataaaatgcaagaggaaagagaggacactgtggaggc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 taaattgggcttcctagacattaataaaatgcaagaggaaagagaggacactgtggaggc 320
Query: 121 aatgaaaatcgaacagctataaatttagagttgccctggttcagtagctaaatgtggtaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aatgaaaatcgaacagctataaatttagagttgccctggttcagtagctaaatgtggtaa 380
Query: 181 tcaaggatttgagtgaacctttagaaatagctttcagaaaatcagacagaactaatttat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcaaggatttgagtgaacctttagaaatagctttcagaaaatcagacagaactaatttat 440
Query: 241 gggactgtatccttttcttagatgctgtatttaaactagtgagagatgcaggtacagaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gggactgtatccttttcttagatgctgtatttaaactagtgagagatgcaggtacagaaa 500
Query: 301 agcagctctccatttggcctggagaatagatatcttcctagaattcttctgttgttgtat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agcagctctccatttggcctggagaatagatatcttcctagaattcttctgttgttgtat 560
Query: 361 ttgcattcctatctgaacacatatatctctacatctacctatatatgtgctcattgtatg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttgcattcctatctgaacacatatatctctacatctacctatatatgtgctcattgtatg 620
Query: 421 ggccttatatctctatatcccatgaatagcaaaacatatttggtttaacctttttaagcg 480
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ggccttatatctctatatcccatgaatagcaaaacatatttggtttaacctttttaagca 680
Query: 481 ttagtgtggtccactgagtatccaaggtgcaaatttcactttctgctgcttttatttata 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ttagtgtggtccactgagtatccaaggtgcaaatttcactttctgctgcttttatttata 740
Query: 541 gtccattcccctctatcatccatagttgaacatctctgttcacacataacttccagcagc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gtccattcccctctatcatccatagttgaacatctctgttcacacataacttccagcagc 800
Query: 601 aattgttccccaggaatactgactcctaaggaacattaacagctgtagttgcccccctt 659
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 aattgttccccaggaatactgactcctaaggaacattaacagctgtagttgcccccctt 859
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 659
Length of database: 1059
Length adjustment: 10
Effective length of query: 649
Effective length of database: 1049
Effective search space: 680801
Effective search space used: 680801
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
