Query= MSMg01no516_p09.b1 MSMg01no516_p09.b1 CHROMAT_FILE:
MSMg01no516_p09.b1 PHD_FILE: MSMg01no516_p09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:48:53 2005
(395 letters)
>mm_chr12_31100161_31100955
Length = 795
Score = 756 bits (391), Expect = 0.0
Identities = 391/391 (100%)
Strand = Plus / Plus
Query: 4 ggaattcattagaaattttgtgctaaatcctcagaatcttttgaatgattcctttcaaac 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcattagaaattttgtgctaaatcctcagaatcttttgaatgattcctttcaaac 263
Query: 64 actgaaattatttctactgctattttgtagcaccccacagcgagatcatcagcattaaga 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 actgaaattatttctactgctattttgtagcaccccacagcgagatcatcagcattaaga 323
Query: 124 ataggtcattgatgaccgactagggcatcctctgctgcatatacagctagagccatgagt 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ataggtcattgatgaccgactagggcatcctctgctgcatatacagctagagccatgagt 383
Query: 184 ccctccatgtgttttctttgattgttggtttagtcccagggagctctgggggtactggtt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ccctccatgtgttttctttgattgttggtttagtcccagggagctctgggggtactggtt 443
Query: 244 ggttcatattgttgttcctcctatgggcaataggaggagagacccttggtcctgtgaagg 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ggttcatattgttgttcctcctatgggcaataggaggagagacccttggtcctgtgaagg 503
Query: 304 ttccatgccccagtataggagaatgccagggccaggaagtgggatgggtagagtggggag 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 ttccatgccccagtataggagaatgccagggccaggaagtgggatgggtagagtggggag 563
Query: 364 caggtgaagggggaaggggataggggatttt 394
|||||||||||||||||||||||||||||||
Sbjct: 564 caggtgaagggggaaggggataggggatttt 594
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 395
Length of database: 795
Length adjustment: 9
Effective length of query: 386
Effective length of database: 786
Effective search space: 303396
Effective search space used: 303396
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no516_p09.g1 MSMg01no516_p09.g1 CHROMAT_FILE:
MSMg01no516_p09.g1 PHD_FILE: MSMg01no516_p09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:48:53 2005
(578 letters)
>mm_chr12_31258801_31259779
Length = 979
Score = 1112 bits (575), Expect = 0.0
Identities = 578/579 (99%), Gaps = 1/579 (0%)
Strand = Plus / Minus
Query: 1 aatgaatggtggggcagtttttttgac-aaaaaaaaaaaaagtggtattcagaaaccgtg 59
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 779 aatgaatggtggggcagtttttttgacaaaaaaaaaaaaaagtggtattcagaaaccgtg 720
Query: 60 tctataaaccgtgcctatagaaacataattggcagaaccgagcttatgggtagtgcattt 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 719 tctataaaccgtgcctatagaaacataattggcagaaccgagcttatgggtagtgcattt 660
Query: 120 ttcatcggtgcatatatcagctcttgatgtcattaggcttataggaacggagatgttaca 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 659 ttcatcggtgcatatatcagctcttgatgtcattaggcttataggaacggagatgttaca 600
Query: 180 gtcagtctctggcctgcttgagagttgtcactgatgttctgggtacctttctgcactatg 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 599 gtcagtctctggcctgcttgagagttgtcactgatgttctgggtacctttctgcactatg 540
Query: 240 gtggctgctttcacgctgaggtgcctcgtgttcagtggatgaaactgcagaagtttactt 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 539 gtggctgctttcacgctgaggtgcctcgtgttcagtggatgaaactgcagaagtttactt 480
Query: 300 tttcacagtcctggaattggaacttctcagctactatggtgcagggctgctttcatctga 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 tttcacagtcctggaattggaacttctcagctactatggtgcagggctgctttcatctga 420
Query: 360 gattttgctccttggtttgcagatgctggacaagtccctaaagaagatgccagcagcagt 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 gattttgctccttggtttgcagatgctggacaagtccctaaagaagatgccagcagcagt 360
Query: 420 ggtgggaagacacagtcaaaagctcttcacagcagcagggggcatttgttttagaaacct 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 ggtgggaagacacagtcaaaagctcttcacagcagcagggggcatttgttttagaaacct 300
Query: 480 acactcaggcagggcagggtcctgtgccagagaacagttcaggactagcaagagtgaggt 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 acactcaggcagggcagggtcctgtgccagagaacagttcaggactagcaagagtgaggt 240
Query: 540 agacttagtaagcttaggaaaaaggcagtacacagtctc 578
|||||||||||||||||||||||||||||||||||||||
Sbjct: 239 agacttagtaagcttaggaaaaaggcagtacacagtctc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 578
Length of database: 979
Length adjustment: 10
Effective length of query: 568
Effective length of database: 969
Effective search space: 550392
Effective search space used: 550392
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
