Query= MSMg01no516_p16.b1 MSMg01no516_p16.b1 CHROMAT_FILE:
MSMg01no516_p16.b1 PHD_FILE: MSMg01no516_p16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:48:55 2005
(605 letters)
>mm_chr12_119069159_119070163
Length = 1005
Score = 1123 bits (581), Expect = 0.0
Identities = 596/601 (99%)
Strand = Plus / Plus
Query: 5 gaattctcacagactcagaagcaaactcttggactcctgactctctttctctgaggcttt 64
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 205 gaattctcacagactcagaagcaaactcttggactcctgactctctttctccaaggcttt 264
Query: 65 tcatctgcagggctgtgggtcatttcttcctcttcttatgggatttcaaacttctacctc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tcatctgcagggctgtgggtcatttcttcctcttcttatgggatttcaaacttctacctc 324
Query: 125 gtattctgcaggtatttttcggttagtgaacgctaattaaactgcaaagatcttaaatcc 184
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 325 gtattctgcaggtatttttcggttagtgaacgctaattaaactgccaagatcttaaatcc 384
Query: 185 agctcaacaaccatcactccatacctgtctaaaacgggaagatctaacttggtgctttac 244
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 agctcaacaaacatcactccatacctgtctaaaacgggaagatctaacttggtgctttac 444
Query: 245 actggatgttggaccaatgaatctttgtagcacaaacaaaacacctgaacctagtctgct 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 actggatgttggaccaatgaatctttgtagcacaaacaaaacacctgaacctagtctgct 504
Query: 305 catcttggggctcagcatcttctggcaaaggcaggcaaataagaaaacactggcagggct 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 catcttggggctcagcatcttctggcaaaggcaggcaaataagaaaacactggcagggct 564
Query: 365 gaagagatggctcagtgattaagagtactgactgttcttccagaggtcctgagttcattt 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gaagagatggctcagtgattaagagtactgactgttcttccagaggtcctgagttcattt 624
Query: 425 tccagcaaccacatggtggctcacaaccacctgcaatgggatccaatgccctcttctgtt 484
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 625 tccagcaaccacatggtggctcacaaccacctacaatgggatccaatgccctcttctgtt 684
Query: 485 gtgtctgatgacagctacagtgtactcacatacataaaataaaaaaagaaagaagaaaga 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 gtgtctgatgacagctacagtgtactcacatacataaaataaaaaaagaaagaagaaaga 744
Query: 545 agaaaacactggctgatgcaatgggaatttctacagagaggcaagcactgcttgcttgtg 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 agaaaacactggctgatgcaatgggaatttctacagagaggcaagcactgcttgcttgtg 804
Query: 605 g 605
|
Sbjct: 805 g 805
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 605
Length of database: 1005
Length adjustment: 10
Effective length of query: 595
Effective length of database: 995
Effective search space: 592025
Effective search space used: 592025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no516_p16.g1 MSMg01no516_p16.g1 CHROMAT_FILE:
MSMg01no516_p16.g1 PHD_FILE: MSMg01no516_p16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:48:55 2005
(637 letters)
>mm_chr12_119218421_119219459
Length = 1039
Score = 845 bits (437), Expect = 0.0
Identities = 480/497 (96%), Gaps = 8/497 (1%)
Strand = Plus / Minus
Query: 146 cccacccacccttttagacagagtctcatgtattcctaagctggccttgtactcactatg 205
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1039 cccacccacccttttagacagagtctcatgtattcctaagctggccttgtactcactatg 980
Query: 206 cagctgaagttgaccttgaacttctgatcctcctgcttacacttatgaagcatcatgctc 265
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 979 cagctgaagttgaccttgaacttctgatcctcctgcttacacttatgaagcatcatgctc 920
Query: 266 ggttaatgtagtccagaggatccaagccagactttcaagaatactgggttagtactctgc 325
|||| ||| ||||||||||||| ||||||||||||||||||||||||| |||||||||||
Sbjct: 919 ggtttatgcagtccagaggatcaaagccagactttcaagaatactgggctagtactctgc 860
Query: 326 caactgagctacatccccaggtcagcttttaacacaaaattctggagaatctgtagtcaa 385
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 859 caactgagctacatccccaggtcagcttttaacacaaaattctggagaatctgtagtcaa 800
Query: 386 aataaattcttatgaaaattttcagggagtcgttgactaatagatagcagaaaatgtgtg 445
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 799 cataaattcttatgaaaaatttcagggagtcgttgactaatagatagcagaaaatgtgtg 740
Query: 446 gtgtccctgagatgggactctctctgattccctggtttagtgtcctggtagaggg--aca 503
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 739 gtgtccctgagatgggactctctctgattccctggtttagtgtcctggtagagggaaaca 680
Query: 504 --c-taaacagaggcagtacatgcagctgttgcccttctccaggctgagcctttctgatc 560
| | |||||||||||||| |||||||||||||||||||||||||| ||||||||||
Sbjct: 679 ggcgt---cagaggcagtacatacagctgttgcccttctccaggctgagtctttctgatc 623
Query: 561 tctgccttgcagccattcaacagaggaaaccgcctgctgaagcttggtgactcactaaga 620
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 622 tctgccttgcagccattcaacagaggaaaccgcctgctgcagcttggtgactcactaaga 563
Query: 621 tctgtaatctttccagg 637
|||||||||||||||||
Sbjct: 562 tctgtaatctttccagg 546
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 637
Length of database: 1039
Length adjustment: 10
Effective length of query: 627
Effective length of database: 1029
Effective search space: 645183
Effective search space used: 645183
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
