Query= MSMg01no518_e22.b1 MSMg01no518_e22.b1 CHROMAT_FILE:
MSMg01no518_e22.b1 PHD_FILE: MSMg01no518_e22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:50:40 2005
(635 letters)
>mm_chr12_109486801_109487836
Length = 1036
Score = 1183 bits (612), Expect = 0.0
Identities = 627/632 (99%), Gaps = 1/632 (0%)
Strand = Plus / Minus
Query: 5 gaattctacgaatgtgagctgggtctggttcccagtactgccccttgtctgaagctgggc 64
|||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 836 gaattctacgaaggagagctgggtctggttcccagtactgccccttgtctgaagctgggc 777
Query: 65 tcttgggcttggagagaccaaggtcgcagcgggcattcacatttctagaactctaagctt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 776 tcttgggcttggagagaccaaggtcgcagcgggcattcacatttctagaactctaagctt 717
Query: 125 ggcgggggccacccagtggttcagtggctctcaccactctctaaaggttccctgcagatg 184
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 716 ggcgggggccacccagtggttcagtggctctcatcactctctaaaggttccctgcagatg 657
Query: 185 aaggctgtgctcagggttagctgcactgcagcggggctggctggagactccatggctgcg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 656 aaggctgtgctcagggttagctgcactgcagcggggctggctggagactccatggctgcg 597
Query: 245 ggagaaatgagtggggtgtgagtgatggcctctttctgggtccctgatatctccagatat 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 596 ggagaaatgagtggggtgtgagtgatggcctctttctgggtccctgatatctccagatat 537
Query: 305 tctggctgccttccctgtcacttctggaactggcaccaagctctgtcctaggccttgact 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536 tctggctgccttccctgtcacttctggaactggcaccaagctctgtcctaggccttgact 477
Query: 365 tgtgccgtccccagggtcatcaggaagcccctgctccgccatcactgtcatcccatctca 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 tgtgccgtccccagggtcatcaggaagcccctgctccgccatcactgtcatcccatctca 417
Query: 425 cgtgctgcagaggtgaggccgtagggtcaggtggcccgtgcacggtcatctccaaatcaa 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 cgtgctgcagaggtgaggccgtagggtcaggtggcccgtgcacggtcatctccaaatcaa 357
Query: 485 ggagaaggaattagaaccccatacccaggcccttctttaggtatagtgttaagtatattt 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 ggagaaggaattagaaccccatacccaggcccttctttaggtatagtgttaagtatattt 297
Query: 545 gagtgcctgttgcatacccaggtaggcctttgtgatgctgtgagcaggacagagagaggc 604
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 gagtgcctgttgcatacccaggtaggcctttgtgatgctgtgagcaggacagagagaggt 237
Query: 605 gaccttggaaagattagagagaaaa-tcaatt 635
||||||||||||||||||||||||| ||||||
Sbjct: 236 gaccttggaaagattagagagaaaaatcaatt 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 635
Length of database: 1036
Length adjustment: 10
Effective length of query: 625
Effective length of database: 1026
Effective search space: 641250
Effective search space used: 641250
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no518_e22.g1 MSMg01no518_e22.g1 CHROMAT_FILE:
MSMg01no518_e22.g1 PHD_FILE: MSMg01no518_e22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:50:40 2005
(612 letters)
>mm_chr12_109334227_109335239
Length = 1013
Score = 1123 bits (581), Expect = 0.0
Identities = 606/615 (98%), Gaps = 4/615 (0%)
Strand = Plus / Plus
Query: 1 acttttttttttttt--aactaaaaatgtcacaggaagtccactagaagcacatgaagcc 58
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 acttttttttttttttaaactaaaaatgtcacaggaagtccactagaagcacatgaagcc 259
Query: 59 actgccagaagtgtacgcgcttgatattaattaaagcaaaagatgacagcccccaggaag 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 actgccagaagtgtacgcgcttgatattaattaaagcaaaagatgacagcccccaggaag 319
Query: 119 aggagtaattttcttctcttggataaatgacctttcggcagactctgctccgaagctctg 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 aggagtaattttcttctcttggataaatgacctttcggcagactctgctccgaagctctg 379
Query: 179 cctggtcattaccagaaatcagagtgttcccgggaggtgggacttgccagctgctcacag 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 cctggtcattaccagaaatcagagtgttcccgggaggtgggacttgccagctgctcacag 439
Query: 239 ctttctgcctctcaggaaaggtgaggacttcatttcttggggtctcccagcaagcctaca 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 ctttctgcctctcaggaaaggtgaggacttcatttcttggggtctcccagcaagcctaca 499
Query: 299 gtgacaccctttgtggtgatgggagccctgtcagaggcccttcaaaagcaccttcgaatg 358
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 gtgacacccttggtggtgatgggagccctgtcagaggcccttcaaaagcaccttcgaatg 559
Query: 359 tatgggttctgttccctgaagccacccctaaaacaagccatctgccag-ccagcaggtag 417
|||||||||||||||||||||||||||||||||||||||| ||| || |||||||||||
Sbjct: 560 tatgggttctgttccctgaagccacccctaaaacaagccacctgg-aggccagcaggtag 618
Query: 418 ctcttccctccctggatcttgcccaccatctctgggctgtggtacacaaacaacttgacc 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 ctcttccctccctggatcttgcccaccatctctgggctgtggtacacaaacaacttgacc 678
Query: 478 gggtctgtccccctggtggcccagcgtgcctctctctggtcacctcttccagcctccgca 537
| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 679 gtgtctgtccccctggtggcccagcgtgcctctctctggtcacctcttccagcctcagca 738
Query: 538 gttcctcatttccagcatcttcacctaagacctgaagcccctgaagcctggatctggggt 597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 gttcctcatttccagcatcttcacctaagacctgaagcccctgaagcctggatctggggt 798
Query: 598 ccttgcctctctcag 612
|||||||||||||||
Sbjct: 799 ccttgcctctctcag 813
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 612
Length of database: 1013
Length adjustment: 10
Effective length of query: 602
Effective length of database: 1003
Effective search space: 603806
Effective search space used: 603806
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
