Query= MSMg01no518_i15.b1 MSMg01no518_i15.b1 CHROMAT_FILE:
MSMg01no518_i15.b1 PHD_FILE: MSMg01no518_i15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:50:58 2005
(704 letters)
>mm_chr12_74795109_74796212
Length = 1104
Score = 1257 bits (650), Expect = 0.0
Identities = 682/700 (97%), Gaps = 12/700 (1%)
Strand = Plus / Plus
Query: 5 gaattctcaaagttagagagagcaagcatagccattgtaagggacctataaatgtgaatt 64
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 205 gaattctcaaagttagagagagcaagcatagcaattgtaagggacctataaatgtgaatt 264
Query: 65 cagtcccaagtgagaagatagctcacaaggtaggacaataacagttttcagcctggacct 124
|||||| ||||||||| ||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 265 cagtcctaagtgagaaaatagctcacaaggtaggacgataacagttttcagcctggacct 324
Query: 125 gtctaatataggggtatgctctctagtgatatatatatccatatatatatatatatatat 184
|||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 325 gtctaatataggggtatgctctctagtgatatatatatcc------------atatatat 372
Query: 185 atatctccatcatatacattcttatatagattgagaagctctagatacacaagggtacca 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 atatctccatcatatacattcttatatagattgagaagctctagatacacaagggtacca 432
Query: 245 ttgacagattaaaatgtatgacttaagggtacatctgttgtgttgtttttcctctcagca 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 ttgacagattaaaatgtatgacttaagggtacatctgttgtgttgtttttcctctcagca 492
Query: 305 tgtcgctgagacatctgatggctgacctctggtggggcacctgctctttaaagaacagga 364
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 493 tgtcgctgagacatctgatggctgacttctggtggggcacctgctctttaaagaacagga 552
Query: 365 aagaacactagttaggaggcatgagaaagttttgtttacatttcaccgaagaacgtaaaa 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 aagaacactagttaggaggcatgagaaagttttgtttacatttcaccgaagaacgtaaaa 612
Query: 425 ccaaacgtgtggtaggagagaagtatgcgggcccaccctcatcagaagcacagggtggtg 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 ccaaacgtgtggtaggagagaagtatgcgggcccaccctcatcagaagcacagggtggtg 672
Query: 485 tttccgactaatcaggcttgaggcagaggaaacggccagagctaagaaggccactgtgtg 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 tttccgactaatcaggcttgaggcagaggaaacggccagagctaagaaggccactgtgtg 732
Query: 545 tgtagtagtaaccgggccggttcttcagacagacatgaatgtggttggcgtgtacatacc 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 733 tgtagtagtaaccgggccggttcttcagacagacatgaatgtggttggcgtgtacatacc 792
Query: 605 taacagtgggcagggaagcacgtgagaacaaggcccttggaccacaagggaagtagacag 664
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 793 taacagtgggcagggaagcacgtgagaacaaggcccttggaccacaagggaggtagacag 852
Query: 665 gcctactgtcatagctgctctgtcgatcattgctggcctc 704
||||||||||||||||||||||||||||||||||||||||
Sbjct: 853 gcctactgtcatagctgctctgtcgatcattgctggcctc 892
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 704
Length of database: 1104
Length adjustment: 10
Effective length of query: 694
Effective length of database: 1094
Effective search space: 759236
Effective search space used: 759236
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
| Query= MSMg01no518_i15.g1 MSMg01no518_i15.g1 CHROMAT_FILE:
MSMg01no518_i15.g1 PHD_FILE: MSMg01no518_i15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:50:58 2005
(624 letters)
>mm_chr12_74854843_74855866
Length = 1024
Score = 1151 bits (595), Expect = 0.0
Identities = 621/637 (97%), Gaps = 13/637 (2%)
Strand = Plus / Minus
Query: 1 ccaagtggttgaggacaaagaagattcagaaattggatttattttgtttccaccctgagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 641 ccaagtggttgaggacaaagaagattcagaaattggatttattttgtttccaccctgagc 582
Query: 61 tgccccctaagaaataaaacagaatggagtggagtcctgctttagtacaacaaactcagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 581 tgccccctaagaaataaaacagaatggagtggagtcctgctttagtacaacaaactcagc 522
Query: 121 tgttcctccaaaagaaataaagggaatgagatgggaacgggctcagtgaattagaaagga 180
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 521 tgttcctccaaaagaaataaagggagtgagatgggaacgggctcagtgaattagaaagga 462
Query: 181 tccaggaggctagtcacaggcagggtgtattcactgtctacagtgtgctgtctccattta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 tccaggaggctagtcacaggcagggtgtattcactgtctacagtgtgctgtctccattta 402
Query: 241 ttgatgaaattgtcaaatacagtcagaagtattggtgattgcacaagcccaggctcctca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 ttgatgaaattgtcaaatacagtcagaagtattggtgattgcacaagcccaggctcctca 342
Query: 301 cttaccagtagacccatcttgtcctggctacacatcttcccactcccctgctgacccatc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 cttaccagtagacccatcttgtcctggctacacatcttcccactcccctgctgacccatc 282
Query: 361 tatttccatattatttggaaacaaatccaacacaggaatgcaacttatctttgctctatt 420
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 281 tatttccatattatttggaaacaaatccaacacaggaatgcaacttatctgtgctctatt 222
Query: 421 atgtgaatccaaaagacgatcatttaatt-aaaaaaaaaaaaacattgggccagttatct 479
|| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 221 atctgaatccaaaagacgatcatttaattaaaaaaaaaaaaaacattgggccagttatct 162
Query: 480 taaaatagttgatagtcaattatccatcaacgctctgccttttgttgcctctgtgtgtgt 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 161 taaaatagttgatagtcaattatccatcaacgctctgccttttgttgcctctgtgtgtgt 102
Query: 540 gtgtgtgtgtgtgtgtgtgtgt------------gagagagagagagagagagagagaga 587
|||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 101 gtgtgtgtgtgtgtgtgtgtgtgagagagagagagagagagagagagagagagagagaga 42
Query: 588 gagagagaaatcttggtcctgaaaaggtgttttgtgg 624
|||||||||||||||||||||||||||||||||||||
Sbjct: 41 gagagagaaatcttggtcctgaaaaggtgttttgtgg 5
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 69
Number of extensions: 15
Number of successful extensions: 14
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 1
Length of query: 624
Length of database: 1024
Length adjustment: 10
Effective length of query: 614
Effective length of database: 1014
Effective search space: 622596
Effective search space used: 622596
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
