Query= MSMg01no519_b24.b1 MSMg01no519_b24.b1 CHROMAT_FILE:
MSMg01no519_b24.b1 PHD_FILE: MSMg01no519_b24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:51:45 2005
(597 letters)
>mm_chr12_30734856_30735852
Length = 997
Score = 636 bits (329), Expect = 0.0
Identities = 335/337 (99%)
Strand = Plus / Minus
Query: 261 ttatcatatttcattttatgttgttgtgttttcttattatctcttagaagcctgctattt 320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 997 ttatcatatttcattttatgttgttgtgttttcttattatctcttagaagcctgctattt 938
Query: 321 tctaatgagagacagaaagaaagtggatctgaatggaagagggggtggaaaggaactggg 380
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 937 tctaatgagagacagaaagaaagtggatctgaatggaagagggggtggagaggaactggg 878
Query: 381 aggagaaaagggatggaactataaactataaactggtcatagtgtatgagaaaataatct 440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 877 aggagaaaagggatggaactataaactataaactggtcatagtgtatgagaaaataatct 818
Query: 441 atttttaataacaagggaaaataattagaaaactacttcatttacaagctaaattttaaa 500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 817 atttttaataacaagggaaaataattagaaaactacttcatttacaagctaaattttaaa 758
Query: 501 aactaagatgaaagttctcaacatccccattgctgtcgccctgggcacaagcctttagcc 560
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 757 aactaagatgaaagttctcaacatccccattgctgttgccctgggcacaagcctttagcc 698
Query: 561 tgaccttcggggacacctacatttcaaaccatgatgc 597
|||||||||||||||||||||||||||||||||||||
Sbjct: 697 tgaccttcggggacacctacatttcaaaccatgatgc 661
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 597
Length of database: 997
Length adjustment: 10
Effective length of query: 587
Effective length of database: 987
Effective search space: 579369
Effective search space used: 579369
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no519_b24.g1 MSMg01no519_b24.g1 CHROMAT_FILE:
MSMg01no519_b24.g1 PHD_FILE: MSMg01no519_b24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:51:45 2005
(513 letters)
>mm_chr12_30605135_30606048
Length = 914
Score = 980 bits (507), Expect = 0.0
Identities = 512/514 (99%), Gaps = 1/514 (0%)
Strand = Plus / Plus
Query: 1 attcaggtctgaacagctgctctagtggtgactcatgcttaaaaaggatgcctcttgttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attcaggtctgaacagctgctctagtggtgactcatgcttaaaaaggatgcctcttgttt 260
Query: 61 cttgctgctgtaacttaccagaaagtgttatatatttatttctgtcggaacagtgttatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cttgctgctgtaacttaccagaaagtgttatatatttatttctgtcggaacagtgttatg 320
Query: 121 ctacaagacttcataatggttttgtgtgctctcgagagagtacctgcagactagttttgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctacaagacttcataatggttttgtgtgctctcgagagagtacctgcagactagttttgg 380
Query: 181 atacattcacattttgtacgttttcatataagctgacatagtgtgatttgccatgtaatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atacattcacattttgtacgttttcatataagctgacatagtgtgatttgccatgtaatg 440
Query: 241 tttatagctgctgctgtctgcacatttgggggtctctatatttctgaagaggtaagctga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tttatagctgctgctgtctgcacatttgggggtctctatatttctgaagaggtaagctga 500
Query: 301 tgaaaataaatagagtgtaaattctttttaatgctttagtgattaaatgttttagtattt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgaaaataaatagagtgtaaattctttttaatgctttagtgattaaatgttttagtattt 560
Query: 361 tgaactgaaatggacaaaaaaagaaaaaggaaaaaaaaagcaggtttgaacgatcacttt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tgaactgaaatggacaaaaaaagaaaaaggaaaaaaaaagcaggtttgaacgatcacttt 620
Query: 421 gtggcctcctggccacttttagacattatcattttgcctcaggttggaggactttgtgga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gtggcctcctggccacttttagacattatcattttgcctcaggttggaggactttgtgga 680
Query: 481 atttaagna-tacattttgtgtgcatattgtttc 513
||||||| | ||||||||||||||||||||||||
Sbjct: 681 atttaagaaatacattttgtgtgcatattgtttc 714
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 513
Length of database: 914
Length adjustment: 10
Effective length of query: 503
Effective length of database: 904
Effective search space: 454712
Effective search space used: 454712
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
