NCACTTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXC
GCGGAATTCTCTTTGGTCCATGTTGCAGGTGGCTGTATGATTGCTGAGAC
TATAGACACACACTCCCGAGCTCAGCTTTTGTAAGAGTTATGGGCATTCA
AACTAAGCTCGTCATGTTTGTGCACCAAGTATTTTACTCATTGTGCCATT
ACCATGAAGCAGAAACACTGTCTCCAGATACAACAGGGATGCTTTACATA
TGTGCTCACAGAGATTGTGACAGCATGCACTGGGCTTTTGAACATTCAAG
TCAAATGTGGTATCCCAGCACTAAGAGTAGGGACTCAATGGGATCTCCTA
CACCTAACCAAGAAGTTATCACCAAAGAACAACTACTTGGAAAGGAAAAC
CTAGTTTTCGCCAATGGAGTCTCACTGGGTTGATAAATCCCATGTACAGC
AGTAGATATCTTTTAGTTATTTTTTCCCTTGTATAGTATGGTTTCCAATT
TTGTGCTTTTACAGGTTTTGGTGTTTTAGTGTGTGTTTGTATGTATGCGT
GTTTCTTGTGCTTTTCTGTTTCCTTTCTTTTCCTATTTCTTGATTGTTTT
TAGAGAGATAGAGAGATAGATACATAGATACATAGATAGATAAACAGGTA
AGTGCATAGATAGACACATAGAGGCAGGCCCTTGGAGTTAGATAGGTTGG
GAGGTAGGAAAGAAACTTGGGAGGAGTTGGGGGAGGGGAAATTTATATCA
AAAT

TGAAAGACGGCCTGGGGGGNNNATGTGGGCGTCTTGGTCCCCGGNNGGGG
GGGGCTCCGGGGCGGGGCACCCTGGAGATTCCCCACAGGGGGGGGCGGTC
GGGGGGGGCTGCCTGTCGTCCCCGGCCCTTCTTCGCTCCGGGCCGGGTGG
TTTTTCTTGGTCCGCCTTGTCCCCGCGGCGTGTCGCGGCGCGGCCCGTTG
TCGTTTGTTCCCTCGCCCTCTGCGGGATGGCCCGGGGGTGCCGTGGGGGC
GCCGTCCTGTCATATCGTTTGCCCTCTCGGCCCCGGGCCCTCGGCCCCTT
CCGCCCTACCCCGGCGCGGGGGTTCCCAGGGCCCGCGGCTGGCGCCCCCC
CCCTGGTTTTGCCCACATATAGAGTCCCCCCCGCTCTCTATCCCTTTTAC
CTAACCCCCCGTCCCTGGCCCCTCGCTTGTTGGGTGTGTCGCTTGGCGGC
CGTCCGCCGGTTCGCGCCGCGGTAGACACCGCGTAGTGTGGCCGGAGCCG
CCGCGGTGATCGACGCCCTCTCCCTCCCCTCTTCCTCGCTGCCCGGGCTT
CTGCCTCGCGGGGGCGTGTCATCTCCCTGGGTGCGGTTGCCTTTCTGCCC
CCCCGCCGTCGCCTTGCGCTCGCCCCACTCGCGCCCGTTAGGTATGCCGG
CCCGCCGTATTGCGCTGCCGGCTTCGCGTCACAGCGGCCTTTGTTGCCGC
GCCCGGCGGCCCCCCCTCGCCCGCGGCCCCTGCTTGTATCCCTCCTCGCC
GGGCGAGTCCGCTN

Query= MSMg01no522_e04.b1 MSMg01no522_e04.b1 CHROMAT_FILE:
MSMg01no522_e04.b1 PHD_FILE: MSMg01no522_e04.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:55:49 2005
         (654 letters)



>mm_chr12_94399574_94400627
          Length = 1054

 Score = 1189 bits (615), Expect = 0.0
 Identities = 642/651 (98%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattctctttggtccatgttgcaggtggctgtatgattgctgagactatagacacaca 63
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctctttggtccaggttgcaggtggctgtatgattgctgagactatagacacaca 263

                                                                       
Query: 64  ctcccgagctcagcttttgtaagagttatgggcattcaaactaagctcgtcatgtttgtg 123
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 264 ctcccgagctcagcttttgtaagagttatgggcattcaaactaagctcctcatgtttgtg 323

                                                                       
Query: 124 caccaagtattttactcattgtgccattaccatgaagcagaaacactgtctccagataca 183
           |||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 324 caccaagtattttattcattgtgccatcaccatgaagcagaaacactgtctccagataca 383

                                                                       
Query: 184 acagggatgctttacatatgtgctcacagagattgtgacagcatgcactgggcttttgaa 243
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 384 acagggatgctttacatatgtgctcacagagactgtgacagcatgcactgggcttttgaa 443

                                                                       
Query: 244 cattcaagtcaaatgtggtatcccagcactaagagtagggactcaatgggatctcctaca 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 cattcaagtcaaatgtggtatcccagcactaagagtagggactcaatgggatctcctaca 503

                                                                       
Query: 304 cctaaccaagaagttatcaccaaagaacaactacttggaaaggaaaacctagttttcgcc 363
           ||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||
Sbjct: 504 cctaaccaagaagttatcaccaaagaacaactacttggaaacgaaaacttagttttcgcc 563

                                                                       
Query: 364 aatggagtctcactgggttgataaatcccatgtacagcagtagatatcttttagttattt 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 aatggagtctcactgggttgataaatcccatgtacagcagtagatatcttttagttattt 623

                                                                       
Query: 424 tttcccttgtatagtatggtttccaattttgtgcttttacaggttttggtgttttagtgt 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 tttcccttgtatagtatggtttccaattttgtgcttttacaggttttggtgttttagtgt 683

                                                                       
Query: 484 gtgtttgtatgtatgcgtgtttcttgtgcttttctgtttcctttcttttcctatttcttg 543
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 684 gtgtttgtatgtatgcgtgtttcttgtgcttttctgcttcctttcttttcctatttcttg 743

                                                                       
Query: 544 attgtttttagagagatagagagatagatacatagatacatagatagataaacaggtaag 603
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 744 attgtttttagagagatagagagatagatacatagatacatagatagataaacagataag 803

                                                              
Query: 604 tgcatagatagacacatagaggcaggcccttggagttagataggttgggag 654
           |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 tgcatagatagacacatagaggcaggcccttggagttagataggttgggag 854


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 654
Length of database: 1054
Length adjustment: 10
Effective length of query: 644
Effective length of database: 1044
Effective search space:   672336
Effective search space used:   672336
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)