Query= MSMg01no522_i16.b1 MSMg01no522_i16.b1 CHROMAT_FILE:
MSMg01no522_i16.b1 PHD_FILE: MSMg01no522_i16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:56:10 2005
(620 letters)
>mm_chr12_32246544_32247559
Length = 1016
Score = 1009 bits (522), Expect = 0.0
Identities = 546/556 (98%), Gaps = 4/556 (0%)
Strand = Plus / Minus
Query: 65 cgcacactgtaagtctgagtgacagtggtttgttgttttgtttttaggattgcttgcttg 124
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 1016 cgcacactgtaagtctgagtgacagtggtttgttgttttgttttttggattgcttgcttg 957
Query: 125 tttttgagactggattcaggatctcattatacagtcctggttggcttggaactttttatg 184
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 956 tttttgagactggattcaggatctcattatacaggcctggttggcttggaactttttatg 897
Query: 185 taggccaggctggttttgaaattctgactctgttcccgcctctgcctttgggatgtcagc 244
||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 896 taggccaggctggctttgaaattctgactctgttcccgcctctgcctttgggatgacagc 837
Query: 245 agtgttctgcctcgcctggcccttaaatcagcggtgactgtgaagtatcacacagagtag 304
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 836 agtgttctgcctcgcctggcccttaaatcagcggtgactgtgaagtatcacacacagtag 777
Query: 305 caacattgccctctgatgtctatttggaagtgacacattcacttccttggggaaaaccac 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 776 caacattgccctctgatgtctatttggaagtgacacattcacttccttggggaaaaccac 717
Query: 365 tgatgtgattaaattctggtaagtaagaaacactcactcacttctatgtgaaataggtga 424
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 716 tgatgtgattaaattctggtaagtaagaaa----cactcacttctatgtgaaataggtga 661
Query: 425 gacttgatttagaaagctggcgtgagtaatcagaggtgttcaacgtaacaagatgggaga 484
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 gacttgatttagaaagctagcgtgagtaatcagaggtgttcaacgtaacaagatgggaga 601
Query: 485 ccagctgtgtttagctcccagtctttccggctttatgttttatcttttcatttatttttt 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 ccagctgtgtttagctcccagtctttccggctttatgttttatcttttcatttatttttt 541
Query: 545 tacattgacttgcttattttgtgtgggggcatacggagatcataaggctactttgtaggg 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 tacattgacttgcttattttgtgtgggggcatacggagatcataaggctactttgtaggg 481
Query: 605 gtcagttctttctttt 620
||||||||||||||||
Sbjct: 480 gtcagttctttctttt 465
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 620
Length of database: 1016
Length adjustment: 10
Effective length of query: 610
Effective length of database: 1006
Effective search space: 613660
Effective search space used: 613660
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no522_i16.g1 MSMg01no522_i16.g1 CHROMAT_FILE:
MSMg01no522_i16.g1 PHD_FILE: MSMg01no522_i16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:56:10 2005
(657 letters)
>mm_chr12_32073364_32074420
Length = 1057
Score = 1255 bits (649), Expect = 0.0
Identities = 655/657 (99%)
Strand = Plus / Plus
Query: 1 ttggagccaagtggtggatatattcagcaaacacacgttggctaatgcttgccatgaccc 60
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttggagccaagtggtggatctattcagcaaacacacgttggctaatgcttgccatgaccc 260
Query: 61 caccattgttctcagtgttcctgtatgaataaatcattcgatctttgcaacaactctcta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caccattgttctcagtgttcctgtatgaataaatcattcgatctttgcaacaactctcta 320
Query: 121 ggcaggggctcttatcactcctgctttccacacaaggaagtaagcacacagagattaggc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggcaggggctcttatcactcctgctttccacacaaggaagtaagcacacagagattaggc 380
Query: 181 aactctcttgagttgtatggctattaaaaattaaagccaagatgtagaagtcaaagactt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aactctcttgagttgtatggctattaaaaattaaagccaagatgtagaagtcaaagactt 440
Query: 241 ggctccaaggttgccacactttgtcattatggtatacagactcagggagatggaccgaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 441 ggctccaaggttgccacactttgtcattatggtatacagactcagggagatggactgaaa 500
Query: 301 ggaaggtgagttgccacctggaaggtttatgcaagcatacagcagaaatggataggagat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ggaaggtgagttgccacctggaaggtttatgcaagcatacagcagaaatggataggagat 560
Query: 361 acgtctaagatgaaataggatcgttgagccagaaacaacagtatatacccataacccaag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 acgtctaagatgaaataggatcgttgagccagaaacaacagtatatacccataacccaag 620
Query: 421 cgcttgagaagttgaaatcaggagttcagcgccatccttagccatagctcaagtccaggg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 cgcttgagaagttgaaatcaggagttcagcgccatccttagccatagctcaagtccaggg 680
Query: 481 acagcttgagttatgtgagatctggtctcaaaacaaaaacaaagcaaaacaacaacaaaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 acagcttgagttatgtgagatctggtctcaaaacaaaaacaaagcaaaacaacaacaaaa 740
Query: 541 accaatcaatcaaccaaacaactagacaaataaaaacagaagaaaaaaaaagataaaaga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 accaatcaatcaaccaaacaactagacaaataaaaacagaagaaaaaaaaagataaaaga 800
Query: 601 ctgacattcataccttgatttccagcatgaagaactaggtaaactatgcagctttta 657
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 ctgacattcataccttgatttccagcatgaagaactaggtaaactatgcagctttta 857
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 657
Length of database: 1057
Length adjustment: 10
Effective length of query: 647
Effective length of database: 1047
Effective search space: 677409
Effective search space used: 677409
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
