Query= MSMg01no522_i20.b1 MSMg01no522_i20.b1 CHROMAT_FILE:
MSMg01no522_i20.b1 PHD_FILE: MSMg01no522_i20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:56:10 2005
(604 letters)
>mm_chr12_33059017_33060020
Length = 1004
Score = 1031 bits (533), Expect = 0.0
Identities = 582/601 (96%), Gaps = 5/601 (0%)
Strand = Plus / Plus
Query: 4 ggaattctttggttttaacttggcttgttctcaaatctctgccaatcagagtttcagcta 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 ggaattctttggttttaacttggcttgttctcaaatctctgccaatcagagtttcagcta 268
Query: 64 ctatttcatcagcttttctctctgcccagtccctcccaatctttcagatttcaaggaggc 123
|||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||
Sbjct: 269 ctatttcatcagcttttctctctgcccagtcccttccaatctttcagatttcaatgaggc 328
Query: 124 aaatatcagacctcagctctctagaccctgaggccttgttcaattaagtttttcctactt 183
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 329 aaatatcagacctcagctctctagaccctgaggccttgttcaattaagttttgcctactt 388
Query: 184 tccctctgtggttagtgaactacacctactgcgttatcctcaagttcaccaggtattttt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 tccctctgtggttagtgaactacacctactgcgttatcctcaagttcaccaggtattttt 448
Query: 244 gctatagccccacccctattctaatagtgtgccaatggctgagtatgtctttttaatgtc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 gctatagccccacccctattctaatagtgtgccaatggctgagtatgtctttttaatgtc 508
Query: 304 tgttggattttcaatcctaagattcctatttataatctctgtattccattaatgagattt 363
|||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 509 tgttggattttcaatcataaaattcctatttataatctctgtattccattaatgagattt 568
Query: 364 tctgtttcctttctatagccttgtttcttcacttgttttaggatgttcagttacttattt 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 tctgtttcctttctatagccttgtttcttcacttgttttaggatgttcagttacttattt 628
Query: 424 gatttatttttatgacagctgctttcgcatctttgctgcgtgattctaacgtcactctta 483
|||||||||||||||||||||||||||| | ||| ||||||||||||||||| ||
Sbjct: 629 -----atttttatgacagctgctttcgcatcttcgttgcatgattctaacgtcactcgta 683
Query: 484 tcttgttgacactgatcttcttttccatttagttaagagtgtctagtaagggattcccaa 543
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 684 tcttgttgacactgatcttcttttccatttagttaagagtgtctagtaaaggattcccaa 743
Query: 544 cgggtacgtacgtattttacggcattgcattatggactccgagtcttatttaaaactcgt 603
| ||||||||||||||||| |||||||||||||| |||| ||||||||||||||||||||
Sbjct: 744 ccggtacgtacgtattttaaggcattgcattatgtactctgagtcttatttaaaactcgt 803
Query: 604 t 604
|
Sbjct: 804 t 804
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 604
Length of database: 1004
Length adjustment: 10
Effective length of query: 594
Effective length of database: 994
Effective search space: 590436
Effective search space used: 590436
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no522_i20.g1 MSMg01no522_i20.g1 CHROMAT_FILE:
MSMg01no522_i20.g1 PHD_FILE: MSMg01no522_i20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:56:10 2005
(608 letters)
>mm_chr12_33216233_33217240
Length = 1008
Score = 1160 bits (600), Expect = 0.0
Identities = 606/608 (99%)
Strand = Plus / Minus
Query: 1 ataggtacttctccagcatcacgtctgcctgcacactgccatgatgatagtggactaaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 964 ataggtacttctccagcatcacgtctgcctgcacactgccatgatgatagtggactaaac 905
Query: 61 ccttaagtctgtaagccagccccaataaaatgttttccttcataagagttgctgaggtca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 904 ccttaagtctgtaagccagccccaataaaatgttttccttcataagagttgctgaggtca 845
Query: 121 tgggtctcttcagaacattagtaaccctgactaagatctgtgtgcaatccccaaagcaat 180
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 844 tgggtctcttcagaacattagtaaccctgactaagatctgtgtgcaatccccgaagcaat 785
Query: 181 tccttacaagaacactgtaatgtctattcgctacacttctgtagatcaagaaacagaatc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 784 tccttacaagaacactgtaatgtctattcgctacacttctgtagatcaagaaacagaatc 725
Query: 241 tgtgtgaatgtgtggtgtctctgacaccttatacttgatattgttattccatattctcaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 724 tgtgtgaatgtgtggtgtctctgacaccttatacttgatattgttattccatattctcaa 665
Query: 301 tgaaaaagaagcatttaagatgagttcaggatctatctctaccttcctataacagggcta 360
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 664 tgaaaaagaagcatttaagatgagttcaggatctatctctacctgcctataacagggcta 605
Query: 361 cagagaaagaggtcccatgagactatgatggtaccctatgttcacactaaaagaatacaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604 cagagaaagaggtcccatgagactatgatggtaccctatgttcacactaaaagaatacaa 545
Query: 421 tctactttctaaggcatggcccctctctaacattctgatctagagaacataggccaacag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 tctactttctaaggcatggcccctctctaacattctgatctagagaacataggccaacag 485
Query: 481 caggagatgaagggccaagaccaaacgccagtgcattctaacttactgacatttttattg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 caggagatgaagggccaagaccaaacgccagtgcattctaacttactgacatttttattg 425
Query: 541 tggtccatgctcctggagaccaaatctctctatatatacatagaaaccacacaaagtgta 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 tggtccatgctcctggagaccaaatctctctatatatacatagaaaccacacaaagtgta 365
Query: 601 atgctgag 608
||||||||
Sbjct: 364 atgctgag 357
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 608
Length of database: 1008
Length adjustment: 10
Effective length of query: 598
Effective length of database: 998
Effective search space: 596804
Effective search space used: 596804
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
