NNNNAACTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
CGCGGAATTCAATCCATCTTGATGACAGTTGACAAGAGAAACTAATTTCT
CTGAACAGCACCTCCCAATGACCTGTTTCTTGTTTTTATTATTTATTTAC
TTACTTATTTTTTATTCAGTCATTCATTTTTCAATGTATTGCACATTCAG
AAACAAACCTTTCACTTTTGCCTTTGATTATGTAGAGCGAGGAAACTGAG
GGGAATGGCAAATCTAGGCACTAATTTTTGACTTGCAAAAAAAATTCTTT
AACAAAAACTTGATTATAATAAGGGCTGGGAAAGATTTGATACGTATTGT
TAATCTGTATGCATTTGAAATTTCGACCTTCTTTGTACTCCAAACAATTC
TGTCCGGTAAATGAGGGAAAAAAATGAGAGGATAAAATAGAGAAACCTAA
TGAAAATTCCGGGATTTTGTTTTTTAAAACACAGAAATATTGTCAGAGTG
TAGTTTTGTTTTAATCCCAGGTGTGGGGATATGGGACTGCTTTGCAGCAG
CTGACTAGGACTTTGCCTCTTGCTCTAGCAGATGAATAGCTTTGCCAGCT
GTAGTTAGTTACTGCAATTGTGTGAAAATTGGAATTCTTGGAATTTTTCA
GAGTTATATAAATGCTAGAGTGGTTTAGATGGTTGTTAGTTACTCATGGG
AGTTTTTTTGAATTTGTTAGTAGTCGTGTTTTAAGAAGACACAGAAGAAA
GAATTAGATT

NNNNGCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCGAA
TGGCAGAGAAGCACCTGAAAAAATGTTCAACATCCTTAATCATCAGGGAA
ATGCAAATCAAAACAACCCTGAGATTCCACCTCACATTCACAAAGAAACT
CACACAATATGTACTCACTGATAAGTGGATATTAGCCCCAAACCTAGGAT
ACCCAAGATATAAGATATAATTTGCTAAACACATGAAACTCAAGAAGAAT
GAAGACTGAAGTGTGGACACTATGCTCCTCCTTAGATTTGGGAACAAAAC
ACCCATGGAAGGAGTTACAGAGACAAATTTTGGAGCTGAGATGAAAGGAT
GGACCATGTAGAGACTGCCATATCCAGGGATCCACCCCATAATCAGCTTC
CAAACGCTGATACCATTGCATACACTAGCAAGATTTTATCGAAAGGACCC
AGATGTAGCTGTCTCTTGTGAGACTATGCCGGGGCCTAGCAAACACAGAA
GTGGATGCTCACAGTCAGCTAATGGATGGATCATAGGGCTCCCAATGGAG
GAGCTAGAGAAAGTAGCCAAGGAGCTAAAGGGATCTGCAACCCTATAGGT
GGAACAACATTATGAACTAACCAGTACCCCGGAGCTCTTGACTCTAGCTG
CATATATATCAAAAGATGGCCTAGTCGGCCATCACTGGAAAGAGAGGCCC
ATTGGACTTGCA

Query= MSMg01no522_l19.b1 MSMg01no522_l19.b1 CHROMAT_FILE:
MSMg01no522_l19.b1 PHD_FILE: MSMg01no522_l19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:56:25 2005
         (618 letters)



>mm_chr12_94337917_94338935
          Length = 1019

 Score = 1096 bits (567), Expect = 0.0
 Identities = 603/615 (98%), Gaps = 1/615 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcaatccatcttgatgacagttgacaagagaaactaatttctctgaacagcacctc 64
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 723 gaattcaatccatcttgatgacagttgacaagagaaactaatttctcttaacagcacctc 664

                                                                       
Query: 65  ccaatgacctgtttcttgtttttattatttatttacttacttattttttattcagtcatt 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 663 ccaatgacctgtttcttgtttttattatttatttacttacttattttttattcagtcatt 604

                                                                       
Query: 125 catttttcaatgtattgcacattcagaaacaaacctttcacttttgcctttgattatgta 184
           |||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||
Sbjct: 603 catttttcaatgtattgcacattcagaaacgaacccttcacttttgcctttgattatgta 544

                                                                       
Query: 185 gagcgaggaaactgaggggaatggcaaatctaggcactaatttttgacttgcaaaaaaaa 244
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 543 gagcgaggaaactgaggggaatggcaaatctaggcactaatttatgacttgcaaaaaaaa 484

                                                                       
Query: 245 ttctttaacaaaaacttgattataataagggctgggaaagatttgatacgtattgttaat 304
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| 
Sbjct: 483 ttctttaacaaaaacttgattataataagggctgggaaagatgtgatacgtattgttaaa 424

                                                                       
Query: 305 ctgtatgcatttgaaatttcgaccttctttgtactccaaacaattctgtccggtaaatga 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 ctgtatgcatttgaaatttcgaccttctttgtactccaaacaattctgtccggtaaatga 364

                                                                       
Query: 365 gggaa-aaaaatgagaggataaaatagagaaacctaatgaaaattccgggattttgtttt 423
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 gggaagaaaaatgagaggataaaatagagaaacctaatgaaaattccgggattttgtttt 304

                                                                       
Query: 424 ttaaaacacagaaatattgtcagagtgtagttttgttttaatcccaggtgtggggatatg 483
           ||| ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||
Sbjct: 303 ttataacacagaaatattgtcagagtgtaattttgttttaatcccaggtgtagggatatg 244

                                                                       
Query: 484 ggactgctttgcagcagctgactaggactttgcctcttgctctagcagatgaatagcttt 543
           |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||
Sbjct: 243 ggactgctttgcagcagctgactatgactttgcctcttgctctagcagatgaatagtttt 184

                                                                       
Query: 544 gccagctgtagttagttactgcaattgtgtgaaaattggaattcttggaatttttcagag 603
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 gccagctgtagttagttactgcaattgtgtgaaaattggaattcttggaatttttcagag 124

                          
Query: 604 ttatataaatgctag 618
           |||||||||||||||
Sbjct: 123 ttatataaatgctag 109


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 618
Length of database: 1019
Length adjustment: 10
Effective length of query: 608
Effective length of database: 1009
Effective search space:   613472
Effective search space used:   613472
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)