Query= MSMg01no525_l02.b1 MSMg01no525_l02.b1 CHROMAT_FILE:
MSMg01no525_l02.b1 PHD_FILE: MSMg01no525_l02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:00:24 2005
(646 letters)
>mm_chr12_76402649_76403695
Length = 1047
Score = 1220 bits (631), Expect = 0.0
Identities = 640/643 (99%), Gaps = 1/643 (0%)
Strand = Plus / Plus
Query: 5 gaattccataccagtgatggtatcaatgactgagatctaggccttaatctaataaataca 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccataccagtgatggtatcaatgactgagatctaggccttaatctaataaataca 264
Query: 65 gaaaggtggctttgaggagaaaattagctccaatgcctaagtccaggtgcccaggatgcc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gaaaggtggctttgaggagaaaattagctccaatgcctaagtccaggtgcccaggatgcc 324
Query: 125 cctccacattcacagagtggtttaacaagcatgaacttgctcagaaagttgtcactgcat 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 cctccacattcacagagtggtttaacaagcatgaacttgctcagaaagttgtcactgcat 384
Query: 185 gaaggacctcaacatgcaaaaacacaggacttcccatttctgcacatgcattgtccttgg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gaaggacctcaacatgcaaaaacacaggacttcccatttctgcacatgcattgtccttgg 444
Query: 245 gagggaggacactcttaagtgtgagcaatggaaatccatcccaagtcaactgaattcaaa 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gagggaggacactcttaagtgtgagcaatggaaatccatcccaagtcaactgaattcaaa 504
Query: 305 gggactgtgttgtccc-ttcatgaagggaactcgagagtaggctagaaatgatgagatca 363
|||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 505 gggactgtgttgtccccttcatgaagggaactcgagagtaggctagaaatgttgagatca 564
Query: 364 gcggtgagtttttctcagactctcagctgtgtttctggataacaaatcacaagctttgca 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gcggtgagtttttctcagactctcagctgtgtttctggataacaaatcacaagctttgca 624
Query: 424 gacagctgcaagattgagaatccctgagccactgcctcctagaccgactctttacactaa 483
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 625 gacagctgcaagattgagaatccctgagccactgcctcctagaccaactctttacactaa 684
Query: 484 cctcattacctgacttcaccacatgtctccaatcataaaaatgaggataatgatcatttt 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 cctcattacctgacttcaccacatgtctccaatcataaaaatgaggataatgatcatttt 744
Query: 544 tacctgctaggtttggagaagggattacctgactttaaacacaagctctttaaaattatc 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 tacctgctaggtttggagaagggattacctgactttaaacacaagctctttaaaattatc 804
Query: 604 gtcattgtcagcatcaggcaagctcttccctcctgatgacaaa 646
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 gtcattgtcagcatcaggcaagctcttccctcctgatgacaaa 847
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 646
Length of database: 1047
Length adjustment: 10
Effective length of query: 636
Effective length of database: 1037
Effective search space: 659532
Effective search space used: 659532
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no525_l02.g1 MSMg01no525_l02.g1 CHROMAT_FILE:
MSMg01no525_l02.g1 PHD_FILE: MSMg01no525_l02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:00:24 2005
(677 letters)
>mm_chr12_76554946_76556022
Length = 1077
Score = 1297 bits (671), Expect = 0.0
Identities = 677/679 (99%), Gaps = 2/679 (0%)
Strand = Plus / Minus
Query: 1 acagtgttctcttttcaccagttcattgcagtaagctagaggtaatgaaatgaattatgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 824 acagtgttctcttttcaccagttcattgcagtaagctagaggtaatgaaatgaattatgt 765
Query: 61 tagtagatgagaattcatgtgatgaaatatttttaataagtgtgaatgtttttaatttat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 764 tagtagatgagaattcatgtgatgaaatatttttaataagtgtgaatgtttttaatttat 705
Query: 121 tatatagttttgtgttctttgtgtactttctacttcattgatattaaaac-ttttttttt 179
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 704 tatatagttttgtgttctttgtgtactttctacttcattgatattaaaactttttttttt 645
Query: 180 ttataaaaaatactgtagtttcaaaatgcctttggcaaatttaaattgtttgaacccatt 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 644 ttataaaaaatactgtagtttcaaaatgcctttggcaaatttaaattgtttgaacccatt 585
Query: 240 ttggcttatccattgtggtaaactttgccaaacaatgcagtctgaagttctggaggtcac 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 ttggcttatccattgtggtaaactttgccaaacaatgcagtctgaagttctggaggtcac 525
Query: 300 tggtattaaccacatattggtatttaataaccacattttaaactaaaattgttatttaac 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 tggtattaaccacatattggtatttaataaccacattttaaactaaaattgttatttaac 465
Query: 360 caagtttgaaggcttgctcacttaaaaattttaatatttgataataccagtgtccaaagg 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 caagtttgaaggcttgctcacttaaaaattttaatatttgataataccagtgtccaaagg 405
Query: 420 ttttatgcagatcattaatatatttttataatttataaatatataacatagatgttctga 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 ttttatgcagatcattaatatatttttataatttataaatatataacatagatgttctga 345
Query: 480 tcgtgtgttttcagaaatgacgagtttctgtatgtactgcatgggaagtagacacaagta 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 tcgtgtgttttcagaaatgacgagtttctgtatgtactgcatgggaagtagacacaagta 285
Query: 540 aagaagagaatatgttttctggattttgcctattgtctgtcagtgtcattttcagcctct 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 aagaagagaatatgttttctggattttgcctattgtctgtcagtgtcattttcagcctct 225
Query: 600 ctctcagagtttatttgggaacaaatagaaggttgggttctaacaaggccctgagcattt 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 224 ctctcagagtttatttgggaacaaatagaaggttgggttctaacaaggccctgagcattt 165
Query: 660 -aaagtcactaagtgcaca 677
||||||||||||||||||
Sbjct: 164 aaaagtcactaagtgcaca 146
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 677
Length of database: 1077
Length adjustment: 10
Effective length of query: 667
Effective length of database: 1067
Effective search space: 711689
Effective search space used: 711689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
