Query= MSMg01no526_c18.b1 MSMg01no526_c18.b1 CHROMAT_FILE:
MSMg01no526_c18.b1 PHD_FILE: MSMg01no526_c18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:01:00 2005
(610 letters)
>mm_chr12_108790590_108791599
Length = 1010
Score = 1143 bits (591), Expect = 0.0
Identities = 603/607 (99%), Gaps = 2/607 (0%)
Strand = Plus / Minus
Query: 5 gaattcttcgtgtcttcagttcgcccttgtattctggagtacagccatgaagttcatcac 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 708 gaattcttcgtgtcttcagttcgcccttgtattctggagtacagccatgaagttcatcac 649
Query: 65 tctcaaaacagacaccatgtaaccagtcagacccttggtgcattaagccatgtgctcctt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 648 tctcaaaacagacaccatgtaaccagtcagacccttggtgcattaagccatgtgctcctt 589
Query: 125 ggagtggaggaggcacactcaggtcaccctgtcccctgtccccacaataacacacagcct 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 588 ggagtggaggaggcacactcaggtcaccctgtcccctgtccccacaataacacacagcct 529
Query: 185 ctgttgctccatgtgtctctgagctttttttgcgtaggttggtttcaggttagagttgtt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 528 ctgttgctccatgtgtctctgagctttttttgcgtaggttggtttcaggttagagttgtt 469
Query: 245 tttccacagctggggatggtggatggggttaacctctgctggactgtggttcagcctgtg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 468 tttccacagctggggatggtggatggggttaacctctgctggactgtggttcagcctgtg 409
Query: 305 acatacagaaggtttaatgagctgagcatatgaggtatggtgaactccttagactgcagc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 acatacagaaggtttaatgagctgagcatatgaggtatggtgaactccttagactgcagc 349
Query: 365 tctatgctggctgtggtctagggagcacctctctgggggagcacctctccagcccagggt 424
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 tctatgctggctgtggtctggggagcacctctctgggggagcacctctccagcccagggt 289
Query: 425 tctttctgtgtgtttctcatgccacacaagaagccagcttgatgctgtactctgtactca 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 tctttctgtgtgtttctcatgccacacaagaagccagcttgatgctgtactctgtactca 229
Query: 485 gaaatactgtagggtgggttagtcatccatccactccagaagtggttttgaggccctact 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 228 gaaatactgtagggtgggttagtcatccatccactccagaagtggttttgaggccctcct 169
Query: 545 gtgtgcatacactgcactgga-tgtggataccctccatgagcaagaaagatatatccttg 603
||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||
Sbjct: 168 gtgtgcatacactgcactggact-tggataccctccatgagcaagaaagatatatccttg 110
Query: 604 cttcaga 610
|||||||
Sbjct: 109 cttcaga 103
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 610
Length of database: 1010
Length adjustment: 10
Effective length of query: 600
Effective length of database: 1000
Effective search space: 600000
Effective search space used: 600000
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no526_c18.g1 MSMg01no526_c18.g1 CHROMAT_FILE:
MSMg01no526_c18.g1 PHD_FILE: MSMg01no526_c18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:01:01 2005
(573 letters)
>mm_chr12_108648074_108649048
Length = 975
Score = 1077 bits (557), Expect = 0.0
Identities = 567/571 (99%), Gaps = 2/571 (0%)
Strand = Plus / Plus
Query: 1 ttcattgtcttggccaccgcgatccacccttgcttattcctccagtggggcagattctgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttcattgtcttggccaccgcgatccacccttgcttattcctccagtggggcagattctgt 260
Query: 61 gaagcccctgtctcctgtctcctggcttgcctctgttattaaaatgcaggtttcttcaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaagcccctgtctcctgtctcctggcttgcctctgttattaaaatgcaggtttcttcaag 320
Query: 121 atggaagcacgagtcattatttttcaatattaatgttattgtttttctgagctgctgttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atggaagcacgagtcattatttttcaatattaatgttattgtttttctgagctgctgttg 380
Query: 181 ttccgtaattcaaggaccccttgtcgaatcccatatgtagcgtgtttattagatgtaata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttccgtaattcaaggaccccttgtcgaatcccatatgtagcgtgtttattagatgtaata 440
Query: 241 ttttatctctcggactccttgcctgacaccatcatttccttcttatttcaataaaaatga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttttatctctcggactccttgcctgacaccatcatttccttcttatttcaataaaaatga 500
Query: 301 tctccctccttgcgattctgacaggagctaatggttttctttatcacaagagaaagtaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tctccctccttgcgattctgacaggagctaatggttttctttatcacaagagaaagtaag 560
Query: 361 aatgggggccatgctaaaagacaaaatgaactgtatatatttgtgccttaattcaattta 420
| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 agtggggaccatgctaaaagacaaaatgaactgtatatatttgtgccttaattcaattta 620
Query: 421 caacataaactcccatcctaataaagtaacttccatagcatctcaggtaacaaaaaaa-- 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 caacataaactcccatcctaataaagtaacttccatagcatctcaggtaacaaaaaaaaa 680
Query: 479 gccacaataaaaagtctggaggcttcaaatttttctgcatttgccaatggtggatttgaa 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gccacaataaaaagtctggaggcttcaaatttttctgcatttgccaatggtggatttgaa 740
Query: 539 aactattatctaggcacaagctcatgggaag 569
|||||||||||||||||||||||||||||||
Sbjct: 741 aactattatctaggcacaagctcatgggaag 771
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 573
Length of database: 975
Length adjustment: 10
Effective length of query: 563
Effective length of database: 965
Effective search space: 543295
Effective search space used: 543295
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
