NTTTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCG
CGGAATTCCCTGTCTTATCACAGATTTGTGCAAATTTAAAAGCTATGCAG
AAGGTCATTGAACAAGAAGGGAAAACGAAGGATAATGTATGCCAGGTAAT
AATTGGAGCCCCAAAGAAGTTCAGTGAGTTTCTAAGATACAAAGGAAGGG
ACTAAGAAACCAGAAATTAAAAGCCACTGGGATAGGTTGGGCATTACTGA
GCTTATGTGTATGTGTGAGGTCCCGGGATGCTGCCCTGGGATACTGCCCT
GGTGTGCATGGACCCCCACCACAGTCACTCCTCCAATTTAAAAGGATAGA
ACTCCCCAAACAAGATGAGGCAGAAGGTTTGTTCAAGCAATTGGAAAGTC
TAGTTTCTCATTCCTAGCCATACACATGCTCACAGTGATAGGGTTAAAGT
GTATGGAACACCTTCCCCCACCCCACCAAAGAAACCTACCAAAGTAATAT
AAAAGTAACAATCACTCAGAGAAGAAGGTGCAAGGTCTCCCCTCTGGCTT
ATTAGAATTTTGTCATAAATTGTGAAAGGATCCCTGCACTCTGCACTTAC
CCATGAGGCATGAGACTCAGTTGATTATTAGCAACCTCAATACCTGCATA
TGTTGCACAAAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGNTGTGTGT
GTGTTTCTTAAGTTGAGCTAAGAGGAGTTTAACAGAGGTACAAACTGTGT
GTCAGGTTCTTCTTCAGA

NCCGATGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXCTTCTTTATGTCCTCTACCATCATCA
TGAGATATGCTTTTAAATCCAGGTCTACCTTTTCAGGTGTGTTAGGGTGT
CCTGGATTGGGCGAAGTGGGCGTTCTGGGTTCTGATGATGGTGAGTGGTC
CTGGCTTCTGTTAGTAGGATTCTTAAGTTTACCTTTCGCCATCTGGCAAT
CTCTGGAGTTAGTTGTTATAGTTGTCTTTGTTAAGAGATTGTTCCTCTGT
TGATTTTGTTACCCTCTATCAGCAGGCGTGGGAGACAAGCTCTCTTCTCT
GAGTTTCAGTGGTCAGAGCAGTCTCTGTAGGCAAGCTCTCCTCTCTCAGG
GAAGGTGTACAGTTATCTGGTGTTTGGACCTCCTCCTGGCTGAAGGTGAA
GGCCCAAAACAGGATCTTTCCCAGAAGCTGTGTTGCTTTGGCCAGGAAGG
TGGCCAGTTGTCTGGAGTCGAAGAAGTCGCCGCCTCAGAAGCTCTGTGGC
TCTTGTCCGGAAGGAGGCTGGTTGTCTGGAGCTGAAGATGGCGCTGCCCC
AGAATCTCTGCGACTCTCTCGCCCGTCCCAGAAACGGCTGGCACTCTGTA
TTCCACACGGTCACCCGTGCAGCCTGCCCTCCGCGGAGTCCCGGAGCCAA
GAAGGCTCCCGCCGGCGCCTGTGCCACAAACCTCTCANGCCGGGCAGACC
CCCGTGCTCTCA

Query= MSMg01no527_d19.b1 MSMg01no527_d19.b1 CHROMAT_FILE:
MSMg01no527_d19.b1 PHD_FILE: MSMg01no527_d19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:02:25 2005
         (675 letters)



>mm_chr12_7567880_7568954
          Length = 1075

 Score = 1243 bits (643), Expect = 0.0
 Identities = 665/674 (98%), Gaps = 3/674 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattccctgtcttatcacagatttgtgcaaatttaaaagctatgcagaaggtcattgaa 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccctgtcttatcacagatttgtgcaaatttaaaagctatgcagaaggtcattgaa 264

                                                                       
Query: 65  caagaagggaaaacgaaggataatgtatgccaggtaataattggagccccaaagaagttc 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 caagaagggaaaacgaaggataatgtatgccaggtaataattggagccccaaagaagttc 324

                                                                       
Query: 125 agtgagtttctaagatacaaaggaagggactaagaaaccagaaattaaaagccactggga 184
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 325 agtgagtttctaagatacaaaggaagggactaaggaaccagaaattaaaagccactggga 384

                                                                       
Query: 185 taggttgggcattactgagcttatgtgtatgtgtgaggtcccgggatgctgccctgggat 244
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 taggttgggtattactgagcttatgtgtatgtgtgaggtcccgggatgctgccctgggat 444

                                                                       
Query: 245 actgccctggtgtgcatggacccccaccacagtcactcctccaatttaaaaggatagaac 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 actgccctggtgtgcatggacccccaccacagtcactcctccaatttaaaaggatagaac 504

                                                                       
Query: 305 tccccaaacaagatgaggcagaaggtttgttcaagcaattggaaagtctagtttctcatt 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tccccaaacaagatgaggcagaaggtttgttcaagcaattggaaagtctagtttctcatt 564

                                                                       
Query: 365 cctagccatacacatgctcacagtgatagggttaaagtgtatggaacaccttcccccacc 424
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 565 cctagccatacacatgctcacagtgatagggttaacgtgtatggaacaccttcccccacc 624

                                                                       
Query: 425 ccaccaaagaaacctaccaaagtaatataaaagtaacaatcactcagagaagaaggtgca 484
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 625 ccaccaaagaaacctaccaaaataatataaaagtaacaatcactcagagaagaaggtgca 684

                                                                       
Query: 485 aggtctcccctctggcttattagaattttgtcataaattgtgaaaggatccctgcactct 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 aggtctcccctctggcttattagaattttgtcataaattgtgaaaggatccctgcactct 744

                                                                       
Query: 545 gcacttacccatgaggcatgagactcagttgattattagcaacctcaatacctgcatatg 604
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 745 gcacttacccatgaggcatgagactcagttgattatcagcaacctcaatacctgcatatg 804

                                                                       
Query: 605 ttgcacaaagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgn---tgtgtgtgtgtttctt 661
           ||||||||||||||||||||||||||||||||||||||||    ||||||||||||||||
Sbjct: 805 ttgcacaaagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtttctt 864

                         
Query: 662 aagttgagctaaga 675
           ||||||||||||||
Sbjct: 865 aagttgagctaaga 878


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 60
Number of extensions: 12
Number of successful extensions: 12
Number of sequences better than 10.0: 1
Number of HSP's gapped: 6
Number of HSP's successfully gapped: 1
Length of query: 675
Length of database: 1075
Length adjustment: 10
Effective length of query: 665
Effective length of database: 1065
Effective search space:   708225
Effective search space used:   708225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)