Query= MSMg01no529_e18.b1 MSMg01no529_e18.b1 CHROMAT_FILE:
MSMg01no529_e18.b1 PHD_FILE: MSMg01no529_e18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:05:12 2005
(671 letters)
>mm_chr12_58815073_58816139
Length = 1067
Score = 1255 bits (649), Expect = 0.0
Identities = 661/667 (99%), Gaps = 4/667 (0%)
Strand = Plus / Plus
Query: 5 gaattccttgcatagttctggggactgtatcagtagctctcctgtaccttctaaaaaatt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccttgcatagttctggggactgtatcagtagctctcctgtaccttctaaaaaatt 264
Query: 65 atttgtaccaattcacaagtacatatttatatcatggctttgaagatgtacatctgattc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 atttgtaccaattcacaagtacatatttatatcatggctttgaagatgtacatctgattc 324
Query: 125 aagagtatacacaaaatgacaaatatatgcatagcttgacatatctaggcagaaaataat 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aagagtatacacaaaatgacaaatatatgcatagcttgacatatctaggcagaaaataat 384
Query: 185 ttgttcagaaagctcatttcctgggaaggacagtgttttaaaaatattttcaagaaaatt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ttgttcagaaagctcatttcctgggaaggacagtgttttaaaaatattttcaagaaaatt 444
Query: 245 ttgcaccaagaaaacatatttgtatatctaaaactaccgaaaacaatccaagaaaatgtc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ttgcaccaagaaaacatatttgtatatctaaaactaccgaaaacaatccaagaaaatgtc 504
Query: 305 tacaaaatttattaaaatgtataaaaatacaatacttcagagttagctctttctgagatt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tacaaaatttattaaaatgtataaaaatacaatacttcagagttagctctttctgagatt 564
Query: 365 tctgtacaacatattatagacaagcacagttggaagtaacaacagtaatgcacaaccttc 424
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 565 tctgtacaacatattatagaca----cagttggaagtaacaacagtaatgcacaaccttc 620
Query: 425 agaaaaactgcacagattttaatatgagcacaatgttacggcttaataatagtttataac 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 agaaaaactgcacagattttaatatgagcacaatgttacggcttaataatagtttataac 680
Query: 485 atcacttttggtaagggaaagaattacagttcctttggaggcttaaattgggatggtttg 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 atcacttttggtaagggaaagaattacagttcctttggaggcttaaattgggatggtttg 740
Query: 545 taaactataaaggcaagtctgtgcaaacacacagtttaagagactagaatagagtttgaa 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 taaactataaaggcaagtctgtgcaaacacacagtttaagagactagaatagagtttgaa 800
Query: 605 ttagtaggaaaactgacatacttatatccctcctttgggtgtagaggcatagttacatct 664
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||
Sbjct: 801 ttagtaggaaaactgacatacttatattcctcctttgggtgtagaggcatagttacacct 860
Query: 665 cctcatg 671
|||||||
Sbjct: 861 cctcatg 867
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 671
Length of database: 1067
Length adjustment: 10
Effective length of query: 661
Effective length of database: 1057
Effective search space: 698677
Effective search space used: 698677
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no529_e18.g1 MSMg01no529_e18.g1 CHROMAT_FILE:
MSMg01no529_e18.g1 PHD_FILE: MSMg01no529_e18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:05:12 2005
(606 letters)
>mm_chr12_58948978_58949983
Length = 1006
Score = 870 bits (450), Expect = 0.0
Identities = 459/462 (99%)
Strand = Plus / Minus
Query: 145 gtccacactcacatgtgtcaacaggggctttcattgctttctgatgtagttcattttgtc 204
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1006 gtccacactcacatgtgtcaacaggggctttcattgctttctgatgtagttcattttgtc 947
Query: 205 ttttcagagcaactacaattcagagttcctcttctatagagttgaactataccctcttct 264
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 946 ttttcagagcaaatacaattcagagttcctcttctatagagttgaactataccctcttct 887
Query: 265 ggtaatcactgttggctccaatttcatgctttagctaaattagttaatctaattcttttc 324
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 886 ggtaatcactgttggctccaatttcatgctttagctaaattagttaatctaattcttttc 827
Query: 325 tgtataagagctcttcaaatgctcaggctcctttttttctcccctttctctagtcactag 384
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 826 tgtataagagctcttcaaatgctcaggctcctttttttctcccctttctctagtcactag 767
Query: 385 gttttctttctataaaccaaataatcttatttttccagtgttgtctaaattacattgtta 444
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 766 gttttcttcctataaaccaaataatcttatttttccagtgttgtctaaattacattgtta 707
Query: 445 taggtccttagcctctttctaagctgttgaaataaccaaagtctcatcatttgtaaaaag 504
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 706 taggtccttagcctctttctaagctgttgaaataaccaaagtctcatcatttgtaaaaag 647
Query: 505 aaccaaatacaatactgcaggtgtgatctaaagagttctgagttgaatctcattatcggt 564
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 646 aaccaaatacaatactgcaggtgtgatctaaagagttctgagttgaatctcattatcagt 587
Query: 565 attcttgtctgagacattacatctgcatttgggcagatcagg 606
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 586 attcttgtctgagacattacatctgcatttgggcagatcagg 545
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 606
Length of database: 1006
Length adjustment: 10
Effective length of query: 596
Effective length of database: 996
Effective search space: 593616
Effective search space used: 593616
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
