Query= MSMg01no529_l15.b1 MSMg01no529_l15.b1 CHROMAT_FILE:
MSMg01no529_l15.b1 PHD_FILE: MSMg01no529_l15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:05:48 2005
(642 letters)
>mm_chr12_33810059_33811101
Length = 1043
Score = 1174 bits (607), Expect = 0.0
Identities = 631/639 (98%), Gaps = 2/639 (0%)
Strand = Plus / Plus
Query: 5 gaattcctaaatatagacactgaagtccaacaaaacacactctacccaggctctcttgta 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcctaaatatagacactgaagtccaacaaaacacactctacccaggctctcttgta 264
Query: 65 aagatcctatgtgactacatatctgctaacaaaatgtagtaaaaaatgttctatgatgcg 124
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 265 aagatcctatgtgactacatatctgccaacaaaatgtagtaaaaaatgttctatgatgcg 324
Query: 125 accaaccataaagatgaagggacactctttcctctgctccttcctccagcctaaaatgca 184
||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 325 accaaccgtaaagatgaagggacactctttcctctgccccttcctccagcctaaaatgca 384
Query: 185 ggtgttagatgtaatggctggagctccagaagtcatttggaccttgaggtgaccttaaag 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ggtgttagatgtaatggctggagctccagaagtcatttggaccttgaggtgaccttaaag 444
Query: 245 aaagagccatgctccaggaagtggaggatcatgctagacgtgaagagtggcatcagagaa 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 aaagagccatgctccaggaagtggaggatcatgctagacgtgaagagtggcatcagagaa 504
Query: 305 tcagccccagactctcaaagcttctctttttttgaggaagaaacagacttctgtcttgtg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tcagccccagactctcaaagcttctctttttttgaggaagaaacagacttctgtcttgtg 564
Query: 365 atagctcttgtcacaaagagtttcccgtcacggggtaaaaaa-tgtaacagatggaccca 423
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 565 atagctcttgtcacaaagagtttcccgtcacggggtaaaaaaatgtaacagatggaccca 624
Query: 424 gacgtctgttcacgaccatcttgtacagataagggaggccagacttgggaaggagctcaa 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 gacgtctgttcacgaccatcttgtacagataagggaggccagacttgggaaggagctcaa 684
Query: 484 accttagaagcagagttgaaaccaggtcggtgccaggcaaaatgctgtctgtggtctcac 543
||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 685 accttagaagccgagttgaaaccaggtcggtgccaggcataatgctgtctgtggtctcac 744
Query: 544 ctccagcgaggatgaagcagcaaactgcaggagttcagaaccagcctgagcgatatatca 603
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 ctccatcgaggatgaagcagcaaactgcaggagttcagaaccagcctgagcgatatatca 804
Query: 604 ggatcctggagaaaggggggatgaggggaaaa-aaggaa 641
|||||||||||||||||||||||||||||||| ||||||
Sbjct: 805 ggatcctggagaaaggggggatgaggggaaaagaaggaa 843
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 642
Length of database: 1043
Length adjustment: 10
Effective length of query: 632
Effective length of database: 1033
Effective search space: 652856
Effective search space used: 652856
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no529_l15.g1 MSMg01no529_l15.g1 CHROMAT_FILE:
MSMg01no529_l15.g1 PHD_FILE: MSMg01no529_l15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:05:48 2005
(687 letters)
>mm_chr12_33866183_33867269
Length = 1087
Score = 1208 bits (625), Expect = 0.0
Identities = 649/657 (98%)
Strand = Plus / Minus
Query: 1 cttgcattcttacaggctagtgggaggattcccatccaaagatgcttggccagaaaccag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 657 cttgcattcttacaggctagtgggaggattcccatccaaagatgcttggccagaaaccag 598
Query: 61 caggcccatcttcactaagctgtatgggagctacatccctgtctctccacacagagagac 120
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 597 caggcccatcttcactaagctgtatgggagctacagccctgtctctccacacagagagac 538
Query: 121 caagcacggtggcaaaagacccaccgatacgccatggcagaccctgctcagtggctctag 180
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 537 caagcacggtggcaaaagacccaccgatacgccatggcaggccctgctcagtggctctag 478
Query: 181 aaacaagagatttgtatctcatgactccagctgtaatctcaacagagcagtaaacacgtt 240
||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 477 aaacaagagatttgtttctcatgactccagctgtaatctcaacagagcagtaaacatgtt 418
Query: 241 agtgagagaggatcacagagctgttccgtggagggtccctagacatcttccagtccaaga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 agtgagagaggatcacagagctgttccgtggagggtccctagacatcttccagtccaaga 358
Query: 301 cctcccaagctgggctctcaggagctctgtgatacctcagaaagaatctcagtggtcact 360
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 cctcccaaactgggctctcaggagctctgtgatacctcagaaagaatctcagtggtcact 298
Query: 361 tgggagctgcggactcccgttctttcagtatagtgcctcctcctgtgtcccaaggctttt 420
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 297 tgggagctgcggactcccgttccttcagtatagtgcctcctcctgtgtcccaaggctttt 238
Query: 421 ttgtttgaatcaagaatgaggtacatatgaacaaacctgactcccgcctgaaatcccagc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 237 ttgtttgaatcaagaatgaggtacatatgaacaaacctgactcccgcctgaaatcccagc 178
Query: 481 acttgggaggctgagaaaggactactgagcatctatctaaaggctacacagtgagttcaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 177 acttgggaggctgagaaaggactactgagcatctatctaaaggctacacagtgagttcaa 118
Query: 541 ggctagcttgagtgacagagtaagacttatctcagccctctatcccctcacctcaaagaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 117 ggctagcttgagtgacagagtaagacttatctcagccctctatcccctcacctcaaagaa 58
Query: 601 tgaggcgccagcccagagagggagcaagtgtagactgtacactgtcacacagctcat 657
||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 57 tgaggtgccagcccagagagggagcaagtgtagactgtacactgtcacaccgctcat 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 687
Length of database: 1087
Length adjustment: 10
Effective length of query: 677
Effective length of database: 1077
Effective search space: 729129
Effective search space used: 729129
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
