ACTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCATAAGCCTTATTCTAAGTCAGTAGTTTGGGCAGTAGTACACACCT
TAAAGAACTTAATATAAGATCTAGGATGGAGAACTGTGGTTCTCATGAGG
CAAGAAGGGGTCATAATGCAAACATACAGTAGAGTAGCAAGGAGTGAGAG
GACTCATGTGTAGTGTGCAGAACTTCTGTATCTTTATTACAGTGGGCGTA
TATCAACCCCTGAATGGATAAAACTGCATAGTTTTTTTTTTTTATAGTAA
TGCGCTTTTCCTGGTTTTGTTGCTTTAGCACACACAGCTGGAATGAGATG
TCACAACTGGGGAAGCTGGAAAAAGCTTGTGCCAACTCTATTGTACTTCA
GCCTTTTGTGGGTCTATGATTATTTCACAATAAAACATTTTAAGTCAATG
CATTTTCAACTCTTTGTCAGAGCAACACCATCATCAGTCTCGTAAGCAAG
AGGAATGGACAGGGTTTGTCTTTTGGAGACAAAATGCAGTTAAGCCATCT
TCTATGGATAATAAACAAGAAATGATATTCAGGATCCTTTTGGTAGTCAG
GCTTAAACTCAGCTGCAGAGCATAATTCATGGCCATTGGAGTACATTAGA
TATAAAATACATTACACAGATAAAACATCAGAATATTGAAATGTGTTCCC
CGTCTGCTAACTTTTTAAGATAGTAGCTGACTGGGGGGCCATAAAGACTA
GAGTACAGCTGGGCGTGGTGGTGCA

CAATGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXTTTATATTAGATAACTATTAAAGCTT
TATTAGAAATTATTATAAATTTACAATATTTTTCTCCTATGGATTGATTT
CTAGTGTCTTGATGAGACACTGAAAAATACAAAACAATAATTTTGAGGAA
GTCATATTTTCATGCTAGTTGCTTTTTTTTTTAATTTATTTATTATATGT
AAGTACACTGTAGCTGTCGTCAGACACTCCAGAAGAGGGCATCAGATTTC
GTTATGGATGGTTGTGAGCCACCATGCGGTTGCTGGGATTTGAACTCAGG
ACCTTTGGAAGAGCAGTCGGCGCTCTTAACCACTGAGCCATCTTGCCAGC
CCGCTAGTTGCTTTTGATGTCATATCTGAGAAGCTATTACCTAGTTCAAA
GTCACAACATTTATACCTATACTTCCTTCAACAGCTGTGGCTCCCATATT
AAGGTGTTTGATCCATTTGTGTATGGTATGAAGTTGCTCAACTCCACTCT
TTGGCACATGGTTGTGTAACTCCCCTCTATCAGTGTTATTTGTTAAGGAG
TTCTTTCCTCACTCTTATCAAAAAGAAACCATCAGGCTGGAGAGATGGCT
CAATGGTTAAGAGTGCCATCAGGGGACATGGGTTTGATCCCAGCAATCAT
CTTTTAATTCCAGTTCTAAGAGAACTAACACCTTCTTCTGTCCTCTGTGG
GCACTACATATACGTGATACATAGACATAAATG

Query= MSMg01no530_l10.b1 MSMg01no530_l10.b1 CHROMAT_FILE:
MSMg01no530_l10.b1 PHD_FILE: MSMg01no530_l10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:07:08 2005
         (724 letters)



>mm_chr12_80395314_80396437
          Length = 1124

 Score = 1334 bits (690), Expect = 0.0
 Identities = 714/722 (98%), Gaps = 2/722 (0%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattcataagcctta-ttctaagtcagtagtttgggcagtagtacacaccttaaagaa 62
           ||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcataagccttactt-taagtcagtagtttgggcagtagtacacaccttaaagaa 262

                                                                       
Query: 63  cttaatataagatctaggatggagaactgtggttctcatgaggcaagaaggggtcataat 122
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 263 cttaatataagatctaggatggagaactgtggttctcatgaggcaagaaggggtcatagt 322

                                                                       
Query: 123 gcaaacatacagtagagtagcaaggagtgagaggactcatgtgtagtgtgcagaacttct 182
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 gcaaacatacagtagagtagcaaggagtgagaggactcatgtgtagtgtgcagaacttct 382

                                                                       
Query: 183 gtatctttattacagtgggcgtatatcaacccctgaatggataaaactgcatagtttttt 242
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 gtatctttattacagtgggcgtatatcaacccctgaatggataaaactgcatagtttttt 442

                                                                       
Query: 243 ttttttatagtaatgcgcttttcctggttttgttgctttagcacacacagctggaatgag 302
           |||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 443 ttttttatagtaatgcacttttcctggttttgctgctttagcacacacagctggaatgag 502

                                                                       
Query: 303 atgtcacaactggggaagctggaaaaagcttgtgccaactctattgtacttcagcctttt 362
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 atgtcacaactggggaagctggaaaaagcttgtgccaactctattgtacttcagcctttt 562

                                                                       
Query: 363 gtgggtctatgattatttcacaataaaacattttaagtcaatgcattttcaactctttgt 422
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 gtgggtctatgattatttcacaataaaacattttaagtcaatgcattttcaactctttgt 622

                                                                       
Query: 423 cagagcaacaccatcatcagtctcgtaagcaagaggaatggacagggtttgtcttttgga 482
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 623 cagagcaacaccatcatcagtctcgtaagcaagaggaatgaacagggtttgtcttttgga 682

                                                                       
Query: 483 gacaaaatgcagttaagccatcttctatggataataaacaagaaatgatattcaggatcc 542
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 gacaaaatgcagttaagccatcttctatggataataaacaagaaatgatattcaggatcc 742

                                                                       
Query: 543 ttttggtagtcaggcttaaactcagctgcagagcataattcatggccattggagtacatt 602
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 ttttggtagtcaggcttaaactcagctgcagagcataattcatggccattggagtacatt 802

                                                                       
Query: 603 agatataaaatacattacacagataaaacatcagaatattgaaatgtgttccccgtctgc 662
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 803 agatgtaaaatacattacacagataaaacatcagaatattgaaatgtgttccccgtctgc 862

                                                                       
Query: 663 taactttttaagatagtagctgactggggggccataaagactagagtacagctgggcgtg 722
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 863 taactttttaagatagtagctgactggggggccataaagactagagtacagccgggcgtg 922

             
Query: 723 gt 724
           ||
Sbjct: 923 gt 924


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 724
Length of database: 1124
Length adjustment: 10
Effective length of query: 714
Effective length of database: 1114
Effective search space:   795396
Effective search space used:   795396
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)