NAACCAATAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGC
GGAATTCTCTGTTTATATCTGTATTATTTGGCTTTTGATATCTAGTTTCT
TAAGTTATTTATATATTTTGGATATTAGTTTTCTATTAGCTGTGAAGTTG
GTAAAAAAAAAAGTCTTTTCCCATTCTGTAGGCTGTCACTTTGTCTGAAT
GATGGCTTCCTTTGCCTTTCTGAAGCTTTTCGATTTCATGATATCCCATT
TATTAATTGTTGATCTTTGTGCCAGCTCTAATAGTGTTCTCTCTGGAAAG
TCATTTTCTGTGCCAATGAGTTGAAGGCAACTCCTGGCTTTCTGTTCTTT
CAGGATGGGTGTATCAGGTTTTATATTGAAGCCTTTGATCCATTTGGAAG
TGAGTTTTGTGCAGGATGATAAGTGTGGATCTATTTGCATTTTCTACACT
CATCCTGTTTGACCAGAATCCTTTGTTGAAGATCTTGTGTTTTTCAGTGT
GCATTTCTGGATTCTCTATATAAAAAAACAAAAACAAAAACAAAAACCAA
CCCAGGTGATTTTCACAATTCCATAGGTGAATATTTATGCCTTAAGTCTT
CAATTTGAGCCCATTGTTCAACATGTATGTTTTTATTACTGTTGTTCTGT
GGTACAACTCGAAATTGGGAATGATGGGATCTCCAGCACTTCTTGGATTG
TTCAGGATTGTTTTACTATTCTTTTTTTCTTTTTCATATGAAGCTGAAAA
TTGN

NNNCGCATTGATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCTTAAGGATTTGATTTAAGA
TATAAAGGATAATAAAGATTAATGGTTAATTTAAATGTTTGACCTGAGCA
GTGGAGGAATGGTTTTGGAATCATACAGGGTACCAAAGGTCCTGGACTAT
GTACTTGAAGGGGCCATGTGTGTGTATCTCTACATGTTACTTCCCATGAT
GTGGTTAACAGTTCCCAGGCTTGGTCCTTCTATGATTGTGGCTGTGAGAA
GAAACAACTTGTTTACCTTTGTGCCAATACCTCTAGTTTATTTGCTCCCA
CAGTTATCTCAAAAGCATCCTATATAACAGTGTGGTATGTTATAGCCTGG
TCTCTTGTATCCTCTGCTGATGGATAATGTTCTCTACAAGTCACACTGAC
TACTGATGGTGCCCTGTAATGATGGCACCCCCGTGGACAGCACCATCTGC
AGAGTGCATTCTCTACTGACCCATACTAGATTCATCCTATAAAGGATACT
CTTCCTTGCTTGGAAGCTGAGACATAGGTTGTCTACTGATGCTGGTGGAG
GAGGCTGTAGATGGGTCTTCTTTGTGTGCAGAAATGGTGACCTCAGTTTT
AAGCATAGGTTCTCTGGGTATAGATACTCTGCAGCTTCCTGGATGCATGC
ATGGAAGTTGGGGGATACGAGGACTTCACAATATGGAAAGGTACAA

Query= MSMg01no537_a02.g1 MSMg01no537_a02.g1 CHROMAT_FILE:
MSMg01no537_a02.g1 PHD_FILE: MSMg01no537_a02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:15:16 2005
         (637 letters)



>mm_chr12_31358555_31359591
          Length = 1037

 Score = 1185 bits (613), Expect = 0.0
 Identities = 631/637 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   cttaaggatttgatttaagatataaaggataataaagattaatggttaatttaaatgttt 60
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 201 cttaaggatttgatttaagatataaaggataatacagattaatggttaatttaaatgttt 260

                                                                       
Query: 61  gacctgagcagtggaggaatggttttggaatcatacagggtaccaaaggtcctggactat 120
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gacctgagtagtggaggaatggttttggaatcatacagggtaccaaaggtcctggactat 320

                                                                       
Query: 121 gtacttgaaggggccatgtgtgtgtatctctacatgttacttcccatgatgtggttaaca 180
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtacttgaaggggccatatgtgtgtatctctacatgttacttcccatgatgtggttaaca 380

                                                                       
Query: 181 gttcccaggcttggtccttctatgattgtggctgtgagaagaaacaacttgtttaccttt 240
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gttctcaggcttggtccttctatgattgtggctgtgagaagaaacaacttgtttaccttt 440

                                                                       
Query: 241 gtgccaatacctctagtttatttgctcccacagttatctcaaaagcatcctatataacag 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtgccaatacctctagtttatttgctcccacagttatctcaaaagcatcctatataacag 500

                                                                       
Query: 301 tgtggtatgttatagcctggtctcttgtatcctctgctgatggataatgttctctacaag 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgtggtatgttatagcctggtctcttgtatcctctgctgatggataatgttctctacaag 560

                                                                       
Query: 361 tcacactgactactgatggtgccctgtaatgatggcacccccgtggacagcaccatctgc 420
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 561 tcacactgactactgatggtgccctataatgatggcacccccgtggacagcaccatctgc 620

                                                                       
Query: 421 agagtgcattctctactgacccatactagattcatcctataaaggatactcttccttgct 480
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 agagtgcgttctctactgacccatactagattcatcctataaaggatactcttccttgct 680

                                                                       
Query: 481 tggaagctgagacataggttgtctactgatgctggtggaggaggctgtagatgggtcttc 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tggaagctgagacataggttgtctactgatgctggtggaggaggctgtagatgggtcttc 740

                                                                       
Query: 541 tttgtgtgcagaaatggtgacctcagttttaagcataggttctctgggtatagatactct 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tttgtgtgcagaaatggtgacctcagttttaagcataggttctctgggtatagatactct 800

                                                
Query: 601 gcagcttcctggatgcatgcatggaagttgggggata 637
           |||||||||||||||||||||||||||||||||||||
Sbjct: 801 gcagcttcctggatgcatgcatggaagttgggggata 837


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 637
Length of database: 1037
Length adjustment: 10
Effective length of query: 627
Effective length of database: 1027
Effective search space:   643929
Effective search space used:   643929
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)