Query= MSMg01no537_p13.b1 MSMg01no537_p13.b1 CHROMAT_FILE:
MSMg01no537_p13.b1 PHD_FILE: MSMg01no537_p13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:16:30 2005
(609 letters)
>mm_chr12_106566331_106567339
Length = 1009
Score = 1042 bits (539), Expect = 0.0
Identities = 598/637 (93%), Gaps = 33/637 (5%)
Strand = Plus / Plus
Query: 5 gaattcctgagtccttgctagggggtaagtcattatctttcgtc---------------- 48
|||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 174 gaattcctgagtccttgctagggggtaagtcattatctttagtcccggaagagaatggca 233
Query: 49 ----------acttctcaaagcattcccgagctaaagccattgctcagatgtttctcata 98
|||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 234 gctttgagccacttctcaaagcattcccgagctaaagccattgctcagatgtttctcaga 293
Query: 99 gcactgcgttttcttttttttctttttctttt-----ttcttt-tttttttttttttttt 152
|||||||||||||||||||| ||||||||||| |||||| ||||||||||||||||
Sbjct: 294 gcactgcgttttcttttttt-ctttttcttttcttttttctttctttttttttttttttt 352
Query: 153 gcacctccgtcctactcagctttcaacacgacagccggtgggtgctagtcacttggcagt 212
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 gcacctccgtcctactcagctttcaacacgacagccggtgggtgctagtcacttggcagt 412
Query: 213 tgtgagacaacatgaagagggtgggcgaattctcaagtgcatttcctgagaagcttggct 272
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 413 tgtgagacaacatgaagagggtgggcgaattctcaagtgcatttcctgaggagcttggct 472
Query: 273 gacgtaaccaagctgcagtctgtaggacagatttcgccaagtttgtgttgtcttttcctt 332
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 gatgtaaccaagctgcagtctgtaggacagatttcgccaagtttgtgttgtcttttcctt 532
Query: 333 ctgttttactgcctgcgccctgtgctcacgttcacagccctcaccgcttgcgttctccag 392
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 533 ctgttttactgcctgcgccctgtgctcacgttcacagccctcaccgcttgcgttctccag 592
Query: 393 ccatctgactgagcgtggagggtgcatgcacacacctgcaaaagtgccctccttctgagt 452
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 593 ccatctgactgagcgtggagggtgcatgcacacacctgcaaaagtgccctccttctgagt 652
Query: 453 tagtgacactgtgacaggaaagtggagcacctgtggaaatctgaactcaggtctgcatat 512
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 653 tagtgacactgtgacaggaaagtggagcacctgtggaaatctgaactcaggtctgcacat 712
Query: 513 ttgtgggacaagcaccttgcccactgagccattgccccgggtctccttttcctttctaaa 572
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 713 ttgtgggacaagcaccttgcccactgagccattgcccctggtctccttttcctttctaaa 772
Query: 573 aaatttacaactatttgtttattttatttgagtgtat 609
|||||||||||||||||||||||||||||||||||||
Sbjct: 773 aaatttacaactatttgtttattttatttgagtgtat 809
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 44
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 609
Length of database: 1009
Length adjustment: 10
Effective length of query: 599
Effective length of database: 999
Effective search space: 598401
Effective search space used: 598401
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no537_p13.g1 MSMg01no537_p13.g1 CHROMAT_FILE:
MSMg01no537_p13.g1 PHD_FILE: MSMg01no537_p13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:16:30 2005
(590 letters)
>mm_chr12_106721635_106722626
Length = 992
Score = 859 bits (444), Expect = 0.0
Identities = 495/516 (95%), Gaps = 9/516 (1%)
Strand = Plus / Minus
Query: 77 gatgtaaaggctccttgttcctccatcagcctccagcttctgggtggcgtaggcaggtta 136
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 992 gatgtaaaggctccttgttcctccatcagcctccagcttctgggtggcataggcaggtta 933
Query: 137 ttcacacagagagggataagcctgggcacataagaacaaaggcctctctttgctctgcac 196
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 932 ttcacacagagagggataagcctgggcacataagaacaaaggcctctccttgctctgcac 873
Query: 197 gggcccaggcctggaaggaccctccctagaggcagagtgaccatacattaatcctcaggg 256
||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 872 gggtccaggcctgggaggaccctccctagaggcagagtgaccatacattaatcctcaggg 813
Query: 257 aggactctgctgcctggatggtccacagtccacggttcttttgagtggaacccaaatggg 316
||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 812 aggactctgctgcctggatggtccaca-------gttcttttgagtggaacccaaatggg 760
Query: 317 caactaggaagaaatgtctccttcacttccagctaagatggtcagcatgcagtcctgcca 376
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||
Sbjct: 759 caactaggaagaaatgtctccttcacttccggctaagatggtcagcatgcagtcctgtca 700
Query: 377 tgatcagaggctacagcaggaccactccctgacccgggcttcgggcagctcaaccttagt 436
||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 699 tgaccagaggcaacagcaggaccactccctgacccgggcttcgggcagctcaaccttagt 640
Query: 437 acataaaaggaactcagttgtctcatgctgtgactacactggatctcagggctactttgt 496
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 639 acataaaaggaactcagttgtctcatgctgtgactacactggatctcagggttactttgt 580
Query: 497 aaagagcagtcatcatagagtctgtaagtgcgtcccaaccacctgctttagctgagcgca 556
||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||
Sbjct: 579 aaagagcagtcatcatagagtctgtaagtgcttcccaactgcctgctttagctgagcgca 520
Query: 557 cccttaggagagcccttgggggggg-g-gtctgtcc 590
||||||||||||||||||||||||| | ||||||||
Sbjct: 519 cccttaggagagcccttggggggggagagtctgtcc 484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 590
Length of database: 992
Length adjustment: 10
Effective length of query: 580
Effective length of database: 982
Effective search space: 569560
Effective search space used: 569560
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
