Query= MSMg01no539_l05.b1 MSMg01no539_l05.b1 CHROMAT_FILE:
MSMg01no539_l05.b1 PHD_FILE: MSMg01no539_l05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:18:45 2005
(578 letters)
>mm_chr12_86451806_86452785
Length = 980
Score = 1052 bits (544), Expect = 0.0
Identities = 568/576 (98%), Gaps = 2/576 (0%)
Strand = Plus / Minus
Query: 5 gaattcattgtc-ttccataccatgagaagaaacatcagatttcctcccatgctgctctg 63
|||||||||||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 780 gaattcattgtctttaaataccatgagaagaaacatcagatttcctcccatgctgctctg 721
Query: 64 cccacgagaagtgcattttaggtgaccgcaagggcagaacttaccaggcagggaacgtct 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 720 cccacgagaagtgcattttaggtgaccgcaagggcagaacttaccaggcagggaacgtct 661
Query: 124 ccctagagggcagttcccctgttgagaaagaagacattatcgacgtcacccaaaatgaaa 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 ccctagagggcagttcccctgttgagaaagaagacattatcgacgtcacccaaaatgaaa 601
Query: 184 agaggggggaaaaaaacaaacaaaca-tttttttaagggcacgtttatcgtgctgctgac 242
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 600 agaggggggaaaaaaacaaacaaacattttttttaagggcacgtttatcgtgctgctgac 541
Query: 243 aggtaatgacacgtttatcgtgctcttaactccgaaagtagacgcaaaacaccgagtcgg 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 aggtaatgacacgtttatcgtgctcttaactccgaaagtagacgcaaaacaccgagtcgg 481
Query: 303 ccaaactctgtcatcctcccctgagcctgccgggcgctagtttggagaccgcgaggagac 362
||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||
Sbjct: 480 ccaaactctgtcatcctcccctgagcctgccaggcgctagtttggagaccgcgaagagac 421
Query: 363 aggccgcgcaatacgattgggggccgtgcctcctctcttaactctaagtcaatgtcgctg 422
|||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 aggccgcggaatacggttgggggccgtgcctcctctcttaactctaagtcaatgtcgctg 361
Query: 423 cgggcgcggctcccagccccggagcaaagggttcgggacagcgggaaaacggccggcgcg 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 cgggcgcggctcccagccccggagcaaagggttcgggacagcgggaaaacggccggcgcg 301
Query: 483 ggctgcctgggagaggacaggggctccggggctccgtacacgcggctgggcggctccgcg 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 ggctgcctgggagaggacaggggctccggggctccgtacacgcggctgggcggctccgcg 241
Query: 543 ggcgtcggcagccaccgcgtcccggtgcccttggtg 578
||||||||||||||||||||||||||||||||||||
Sbjct: 240 ggcgtcggcagccaccgcgtcccggtgcccttggtg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 578
Length of database: 980
Length adjustment: 10
Effective length of query: 568
Effective length of database: 970
Effective search space: 550960
Effective search space used: 550960
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no539_l05.g1 MSMg01no539_l05.g1 CHROMAT_FILE:
MSMg01no539_l05.g1 PHD_FILE: MSMg01no539_l05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:18:45 2005
(178 letters)
>mm_chr12_86306521_86307098
Length = 578
Score = 329 bits (170), Expect = 7e-95
Identities = 176/178 (98%)
Strand = Plus / Plus
Query: 1 ctgtatttcgcttccctaatcactgtcccaacttggacagtgcaaggttcaaacctttat 60
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 201 ctgtatttcgcttccctaatcactgccccaacttggacagtgcaaggttcaaacctttat 260
Query: 61 taaatatttttctactcctttctacatactatttgcccacttgcatttccttccttacca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 taaatatttttctactcctttctacatactatttgcccacttgcatttccttccttacca 320
Query: 121 aaatgtgaaaaactgcttcatacttggaaggcctccattgctttttcttccaaatagc 178
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 321 aaatgtgaaaaactgcttcatacttggaaggtctccattgctttttcttccaaatagc 378
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 178
Length of database: 578
Length adjustment: 8
Effective length of query: 170
Effective length of database: 570
Effective search space: 96900
Effective search space used: 96900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
