NNNCCACACTTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXCGCGGAATTCTCACCTGACGAATACCGAATGGCAGAGAAGCACCTGAA
AAAATGTTCAACATCCTTAATCATCAGGGAAATGCAAATCACAACAACCC
TGAGATTCCACCTCACACCAGTCAGAAGGGCTAAGATCAAAAATTCAGGT
GACAGCAGATGCTGGCGAGGATGTGGAGAAAGAGGAACACTCCTCCATTG
TTGGTGGGATTGCAGGCTTGTACAACCACTCTGGAAATCCGTCTGGCGGT
TCCTCAGAAAATTGGACATAGTACTACCGGAGGATCCAGCAATACCTCTC
CTGGGCATATATCCAGAAGATGCCCCAACTGGTAAGAAGGACACATGCTC
CACTATGTTCATAGCAGCCTTATTTATAATAGCCAGAAGCTGGAAAGAAC
CCAGATGCCCCTCAACAGAGGAATGGATACAGAAAATGTGGTACATCTAC
ACAACGGAGTACTACTCAGCTATTAAAAAGAATGAATTTATGAAATTCCT
AGCCAAATGGATGGACCTGGAGGGCATCATCCTGAGTGAGGTAACACATT
CACAAAGGAACTCACACAATATGTACTCACTGATAAGTGGATATTAGCCC
AAAACCTAGGATACCCAAGATATAAGATACAATTTCCTAAACACATGAAA
CTCAAGA

TTCGAATTAACCGATGCTATGNGXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXACACCTTTCAATCAA
AAAAATCATTCCAGTGATAATAAAGACATAATAATACTAAGTTTTCCATT
GATAGATTATTGGAAGAGAGCTGCGTGTTTATACATAAAGCTTTATCTAT
GATGGACTGGGTTTTTTCCTTTATACGTTTGTTTTTTGCTTTTTGAAGTT
CTGGGTATTGAACCCAGGATTTTCACATGTTATGCTACATCCTTCTCATC
TGGCCAACATATTTTCCCTAGAGATACAGTTATATGATCCTTGAGTGACT
ATGCATATCCCCAGAAATTACTCTACACCCAAGCACATGCAGACAAACAG
TGGACTCAGTAGAATTTAATAACTAGGGAGAGAAAATGGTAAAAGGAATG
GGGAAAGAATAGAAAGGATGGCAAAAGGGGTGGATTTTATCAAATGTGCT
ACAATTGTGTATGAAATGCTCAATTAAACCATAGAATGCAAAACAAAAAG
AAGCTGAAAGGTAGACTCACAATAAAACAGAAGTAGAGGCCATAGAAATG
TATACAATGAAACCATCTTCCTATCAAAAAGAAACCTTGGTTGCTGTATA
ATCTAGACAAAGATGCCAGAGAGCACCTACCTTGCTCAGTGTAAATTAGA
AAAGGAAGTGG

Query= MSMg01no540_b05.g1 MSMg01no540_b05.g1 CHROMAT_FILE:
MSMg01no540_b05.g1 PHD_FILE: MSMg01no540_b05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:19:14 2005
         (614 letters)



>mm_chr12_50774436_50775451
          Length = 1016

 Score = 1015 bits (525), Expect = 0.0
 Identities = 594/617 (96%), Gaps = 4/617 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   acacctttcaatcaaaaaaatcattccagtgataataaagacataataatactaagtttt 60
           |||| |||||||||||||| |||||||||||||||||||||||| |||||| ||||||||
Sbjct: 201 acacttttcaatcaaaaaactcattccagtgataataaagacatgataatattaagtttt 260

                                                                       
Query: 61  ccattgatagattattggaagagagctgcgtgtttatacataaagctttatctatgatgg 120
           |||| |||||||||||||||||||||||| |||| || ||||||||||||||||||||||
Sbjct: 261 ccatggatagattattggaagagagctgcctgttcattcataaagctttatctatgatgg 320

                                                                       
Query: 121 actgggttttttcctttatacgtttg-ttttttgctttttgaagttctgggtattgaacc 179
           |||| ||||||||||||||||||||| ||||||||||||||||||||||| |||||||||
Sbjct: 321 actgagttttttcctttatacgtttgtttttttgctttttgaagttctggatattgaacc 380

                                                                       
Query: 180 caggattttcacatgttatgctacatccttctcatctggccaacatattttccctagaga 239
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 381 caggattttcacatgttatgctacatccttctcatctagccaacatattttccctagaga 440

                                                                       
Query: 240 tacagttatatgatccttgagtgactatgcatatccccagaaattactctacacccaagc 299
           ||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||
Sbjct: 441 tacagttatatgatccttgagtgactatgcatatccttggaaattactctacacccaagc 500

                                                                       
Query: 300 acatgcagacaaacagtggactcagtagaatttaataactagggagagaaaatggtaaaa 359
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 501 acatgcagacaaacagtggactcagtagaattaaataactagggagagaaaatggtaaaa 560

                                                                       
Query: 360 ggaatggggaaagaatagaaaggatggc-aaaaggggtggattttatcaaatgtgctaca 418
           ||||| | |||||||||||||||||||| |||| ||||||||||||||||||||||||||
Sbjct: 561 ggaat-gagaaagaatagaaaggatggcaaaaatgggtggattttatcaaatgtgctaca 619

                                                                       
Query: 419 attgtgtatgaaatgctcaattaaaccatagaatgcaaaac-aaaaagaagctgaaaggt 477
           |||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||
Sbjct: 620 attgtgtatgaaatgctcaattaaaccatagaatacaaaacaaaaaagaagctgaaaggt 679

                                                                       
Query: 478 agactcacaataaaacagaagtagaggccatagaaatgtatacaatgaaaccatcttcct 537
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 680 agactcacaataaaacagaagtagaggccatagaaatatatacaatgaaaccatcttcct 739

                                                                       
Query: 538 atcaaaaagaaaccttggttgctgtataatctagacaaagatgccagagagcacctacct 597
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 atcaaaaagaaaccttggttgctgtataatctagacaaagatgccagagagcacctacct 799

                            
Query: 598 tgctcagtgtaaattag 614
           |||||||||||||||||
Sbjct: 800 tgctcagtgtaaattag 816


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 614
Length of database: 1016
Length adjustment: 10
Effective length of query: 604
Effective length of database: 1006
Effective search space:   607624
Effective search space used:   607624
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)