NAAACCTATAAXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTCGAGGATCC
GCGGAATTCCATTAAAATATATTGCATATTGTGATCATATTCATGCTCTC
TCTCTTCTGACTCTTGGAGTATTATCCTTCTCAAGCATGTAAAAAACCTT
GGCCTTTCTTTAAAATACGTCATATCCTATTAAGATCATCCATATGTGCA
TGAGTGTAAAGCCATCCACTAGAGCATAGAAAACCCACTAAGCAACAGGT
CACAAAAGAAAACTGACTCCTCCCCCTTCCATTAGTCATCATATGCCAAT
AGCTCCTTAGATAATTGTGGAGTAGTTTGATATTGCATGACACTTCACAT
CCATACTGAACTTTTTGTAAAATCACAGTGCATCTTCTGTGCTTAATAAA
TGTACTATATTTCTTGAGTTGCTTATATAGTTTGGATATTAACTCTGTTG
GATGTAGCTTCCTTTGTGAAGGTCATGGAAGCCCATTCTGTAGGCTTTTT
GCCCTATTGGTGGTATCTTTTGCCATACAGAAAATTTTCAGTTTCATGAT
GTCTCATTTATTAATTGCTGATCTTAGTGCCTGAAGTGTTTGTGTTCTGT
TCAGGAAATATCTTCTTTACCAATGTATTCAAAGCTATTGTTCACTTTCT
CTTCTATTAGATTTAGTGTATTCAGTATTATGTTGAGATCTTTGATCCAC
TTGGACTTGAATTTTCTGCAGGGTGATAAATTTGGATATATTTGCATTCT
TCTACAT

NAAACGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXTAGGCTGAAGTCCAAGACCTGCA
CAAAATCAAGGCAATCAAGATATCAGCATGGAATATTGATGGAATTACCC
CCCCATCCCTAACTGAGGAGCCAATGACAGTTGATTCCCTCTTGGGAAAG
GAAAGTCAATTCTCTTTAAGGGTGTAGCCCATGTTAGGTTATCATGCCCC
ACTAAATGGCTTCATACACATCAGTGTATGTGCTACAAAAAGTTGCTTTG
GTAGATTATTCTAAAAAAAATGGTATGAGAGTGATAGCTTAAGGGGTGGA
TCTGGGAGGAGATAGGGGAAGAATACAAAAGTGTATAGAAATCTGAAGTC
TACACACACACACACACACACACACACACACACACACACACACGCTGATA
TGTTTCTGAGTATGTGGGAAGGGATTCTCATCACAGTAGAGGAACTATAG
TAGCTGATAGGTGCTGGAGCTCAGAATGTTGCTATACTTTGTGTGCAATG
CCTAATACACTGCAACTATTCTAGTGATGATCCTACATATGGACAACACT
AAGTGGATTCAGTGGAATAAGAAGAGAGTACATATATTTTGGAGTTGTAG
AGAAAGGGGATCAGTGGATTTGAGCCAAATATATTAAATTTGTGTATGAA
ATTCTCAAATAGTGATTTTTTTTTAAAAAGTATGAAAAAGAATGCAGCCA

Query= MSMg01no542_e22.g1 MSMg01no542_e22.g1 CHROMAT_FILE:
MSMg01no542_e22.g1 PHD_FILE: MSMg01no542_e22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:22:18 2005
         (662 letters)



>mm_chr12_6947091_6948151
          Length = 1061

 Score = 1154 bits (597), Expect = 0.0
 Identities = 639/663 (96%), Gaps = 18/663 (2%)
 Strand = Plus / Plus

                                                                       
Query: 1   taggctgaagtccaagacctgcacaaaatcaaggcaatcaagatatcagcatggaatatt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 taggctgaagtccaagacctgcacaaaatcaaggcaatcaagatatcagcatggaatatt 275

                                                                       
Query: 61  gatggaattacccccccatccctaactgaggagccaatgacagttgattccctcttggga 120
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 gatggaattaccccctcatccctaactgaggagccaatgacagttgattccctcttggga 335

                                                                       
Query: 121 aaggaaagtcaattctctttaagggtgtagcccatgttaggttatcatgccccactaaat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 aaggaaagtcaattctctttaagggtgtagcccatgttaggttatcatgccccactaaat 395

                                                                       
Query: 181 ggcttcatacacatcagtgtatgtgctacaaaaagttgctttggtagattattctaaaaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 ggcttcatacacatcagtgtatgtgctacaaaaagttgctttggtagattattctaaaaa 455

                                                                       
Query: 241 aaa-tggtatgagagtgatagcttaaggggtggatctgggaggagataggggaagaatac 299
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 aaaatggtatgagagtgatagcttaaggggtggatctgggaggagataggggaagaatac 515

                                                                       
Query: 300 aaaagtgtatagaaatctgaagtctacacacacacacacacacacacacacacacacaca 359
           |||||| ||||||||||||||||||||||||||||||||||||||||||||         
Sbjct: 516 aaaagtttatagaaatctgaagtctacacacacacacacacacacacacac--------- 566

                                                                       
Query: 360 cacacacgctgatatgtttctgagtatgtgggaagggattctcatcacagtagaggaact 419
                  |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 -------gctgatatgtttctgagtatgtgggaagggattctcatcacagtagaggaact 619

                                                                       
Query: 420 atagtagctgataggtgctggagctcagaatgttgctatactttgtgtgcaatgcctaat 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 atagtagctgataggtgctggagctcagaatgttgctatactttgtgtgcaatgcctaat 679

                                                                       
Query: 480 acactgcaactattctagtgatgatcctacatatggacaacactaagtggattcagtgga 539
           |||||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||
Sbjct: 680 acactgcaactattctagtgatgatcctacatatgggcaacactaagttgattcattgga 739

                                                                       
Query: 540 ataagaagagagtacatatattttggagttgtagagaaaggggatcagtggatttgagcc 599
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 ataagaagagagtacatatattttggagttgtagagaaaggggatcagtggatttgagcc 799

                                                                       
Query: 600 aaatatattaaatttgtgtatgaaattctcaaatagtgatttttttttaaaaagtatgaa 659
           |||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||
Sbjct: 800 aaatatattaaatttgtgtatgaaattctcaaatagtgattttttttttaaa-gtatgaa 858

              
Query: 660 aaa 662
           |||
Sbjct: 859 aaa 861


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 50
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 662
Length of database: 1061
Length adjustment: 10
Effective length of query: 652
Effective length of database: 1051
Effective search space:   685252
Effective search space used:   685252
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)