XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCCTGA
TCTTTCCAAGACTTTTACCATGAATGGGTGTTGGATTTTGTCAAATGCTT
TCTCCACATCTAAGGAAATGACCATGGGATTTTGTCTTTGAGTTTGTTTA
TATAATGGATGACTTTGATGGATTTCCGTATATTAAACCATCCCTGCATC
CCTGGAATGAAACCTACTTGGTCAGGATGGATGATTGTTTTGATGTGTTC
TTGGATTTGGTTAGCGAGAATTTTATTGAGTATTTTTGCATCGATATTCA
TAAAGGAAATTGGTCTGAAGTTAGGATGCTTTCCCTGTGCCCTCTAGTGA
GTCTGTCTAAGGGTTTATCTATCTTGTTGATTTTCTCAAAGAACCAGCTC
CTTGATTTGTTGATTCTTTGAATAGTTCTTCTTGTTTCCACTTGGTTGAT
TTCGCCCTTGAGTTTGATTATTTCCTGCCATCTACTCCTCTTGGGTGAAT
TTGCTTCCTTTTGTTCTAGAGCTTTTAGGTGTGTTGTCAAGCTGATAGTG
TGTGCTCTCTCTAGTTTCTTTTTGGAGGCACTCAGAGCTATGAGTTTCCC
TCTTAGAAATGCTTTCATTGTGTCCTATAAGGTTGGGTATGTTGTGGCTT
CGTTTTTATTAAACTCTAAAAAGTCCTTAAGTTCTTTCTTTATTCCTTCC
TTGACCAAGGTATCATTGAGAAGAGTGTTGTTCAGTTTCCACGTG

TGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXAGAAAAGCTATAGTGAAGTTCTTTTATTTTCTGGA
ACTTTGATAATACTTAGTCATTTCAAACATTTTTTGTAAATTTTTTTTCA
ACAGAACAGAACAAAGATGGCAGGGAGCATTTAATGGCAGGGAATATCCA
CATTCTTGAGACAGAACAATTGATGGAAACCACACAGCAGTCGAAGCTCA
GGAGAACACACAGTCTGACCATAGATAGGAGAAAAATCTTTATCACCTAT
AGTATTTCAGACAGTGGGTTGAAATCCAGAATTTATAAAGAACTTATAGA
AACTAAATACCCAGGAAATAAAACCACCAATCAACAAAGGGGCTATAAGT
TAAATAGAGTTTGGGGAAAAAATGCACAAATGGCCAATAACTACGAAGTT
TAATATTCCTAGTTATTAGGAAAGTCCAAAATAAATCTATAAGCTAACCA
ACTCATCCTGGTCAGAATGGCTACTGTCAAGAATTCTGACATCAAATGTT
CAAGAGGATTTTGATAAAGGGGAGTCCTTATTCACTGTAGTTTAAATGCA
AGTTAATAAAAACAAATGTGATTAATCAGTGTGGAGGTTCCTCAAAAAAT
GGAAAGGACTCTATATGAACTAGCTACTCTACTCTTGAACCAGAGAACTC
CATATCCTACCATAGAGATATATGCATATATATGCATACTCATG

Query= MSMg01no547_l20.g1 MSMg01no547_l20.g1 CHROMAT_FILE:
MSMg01no547_l20.g1 PHD_FILE: MSMg01no547_l20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:29:27 2005
         (679 letters)



>mm_chr12_66036329_66037407
          Length = 1079

 Score =  775 bits (401), Expect = 0.0
 Identities = 407/409 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   agaaaagctatagtgaagttcttttattttctggaactttgataatacttagtcatttca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 agaaaagctatagtgaagttcttttattttctggaactttgataatacttagtcatttca 350

                                                                       
Query: 61  aacattttttgtaaattttttttcaacagaacagaacaaagatggcagggagcatttaat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 aacattttttgtaaattttttttcaacagaacagaacaaagatggcagggagcatttaat 290

                                                                       
Query: 121 ggcagggaatatccacattcttgagacagaacaattgatggaaaccacacagcagtcgaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 ggcagggaatatccacattcttgagacagaacaattgatggaaaccacacagcagtcgaa 230

                                                                       
Query: 181 gctcaggagaacacacagtctgaccatagataggagaaaaatctttatcacctatagtat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 229 gctcaggagaacacacagtctgaccatagataggagaaaaatctttatcacctatagtat 170

                                                                       
Query: 241 ttcagacagtgggttgaaatccagaatttataaagaacttatagaaactaaatacccagg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 169 ttcagacagtgggttgaaatccagaatttataaagaacttatagaaactaaatacccagg 110

                                                                       
Query: 301 aaataaaaccaccaatcaacaaaggggctataagttaaatagagtttggggaaaaaatgc 360
           ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
Sbjct: 109 aaataaaaccaccaatcaacaaaggggctttaagttaaatagagtttggggaaaaaatac 50

                                                            
Query: 361 acaaatggccaataactacgaagtttaatattcctagttattaggaaag 409
           |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 49  acaaatggccaataactacgaagtttaatattcctagttattaggaaag 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 679
Length of database: 1079
Length adjustment: 10
Effective length of query: 669
Effective length of database: 1069
Effective search space:   715161
Effective search space used:   715161
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)