BAC Information

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BAC

Clone NameB6Ng01-005D07
Chromosome13 (Build37)
Map Location 67,063,090 - 67,239,956
singlet/doubletdoublet
Overlap genePtdss1, Zfp712, Zfp708, Zfp759
Upstream geneEG628746, LOC100042434, LOC100041892, EG665974, LOC100041915, 2410141K09Rik, C330014B19Rik, Mzf6d, Vmn2r-ps106, LOC666027, LOC100042492, LOC100041947, EG382769, LOC666052, EG432768, LOC666061, Uqcrb, Mterfd1
Downstream geneRsl1, LOC674699, Zfp455, Zfp458, Zfp457, A230042K10Rik, E130120F12Rik, Zfp456, 2810487A22Rik, Zfp459, C330011K17Rik, LOC666098, 9630025I21Rik, Zfp817, Zfp87, Zfp748, A530054K11Rik, LOC328277, 3830402I07Rik, EG666137, Zfp85-rs1, LOC674597, Zfp273, BC048507, LOC666185, LOC100042687, LOC100042692, LOC674779, LOC677603, LOC100042124
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-005D07.bB6Ng01-005D07.g
ACCDH842406DH842407
length764808
definitionDH842406|Mus musculus domesticus DNA, BAC clone: B6Ng01-005D07, 5' end.DH842407|Mus musculus domesticus DNA, BAC clone: B6Ng01-005D07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(67,063,090 - 67,063,849)(67,239,150 - 67,239,956)
sequence
gaattctgggctagtggtaccttgtcactctccttaaattaataggcaag
cagtttcagccccagagtctcagctaggaagaccatgctgttgcagatct
gggaacttgcctgtgggattcctgtggtaaatgaaaagattgctaggact
ccacactcatgcatgtcctgttcaacttagcaaaagctttaacagcaaga
gtcttagaggaacttgttagattccaagtgagttagtataaggagagttt
ctaattggtagtttctttttttgttgttgttttgtttgtttgttttttca
agacagggtttctctgtgtagccctggctgtcctgaaactcactttgtag
accaggctggcctcgaactcagaaatccgcctgcctctgccttccaagtg
ctgggattaaaggcatgcgccaccatgcccggctttaattggtagtttct
aaatgacagttgcaacattgggatacaatggttaagaaagtaattagaca
aagtttcagcatatctttaagaagtgacatcactctcaaaataacaacag
caacaacaacaacaacaacaaaaagtgacttcacatgtacacagccagag
agaagctgaatagaagctagaaatagaaacataaagaatccagtagactt
ggaaatttaaaaaccctttctaaaaaccttgggctgaagaagaaattatg
ggtttgaagaagaactcacagtggaatattttgtaaatttctaatgatga
gtgaaaattgctga
gaattctctcgtgttgacaaatagatgatggagagaagaaggcctttcca
catactttacatttgtatggcttctcacctttatgaattatcttatgttt
tgaaagtcttgatggatatttgaaggccttggcacatacttcacagttgt
agggtttttctcctgtgcgaattatcttgtgttgagaaagttttgatgga
acatggaaggccttgctacatgtttcatacttgtagggtttttctcctgt
atggattcttttgtgttcagaaagtaatgatgaaaaacaaaaggacttgc
caacctcttcacaactatatggcttcaaacctaaatgaattatctgctga
tttccaagtactttttccctcttagaaacttctttgcatgtagagctatt
tccccctatgagtaagagttgagaaattaatgaaaacagatccaaaatct
gtatatctgtactgatagtttaaaaaacaaacaaacatttactcctactt
gcatttgtctgtattaatgataagctacattcaattttctatacctgtat
tcagtgaactacaatttaaaacacagaataaagtgaaaatcatgtagact
cccttgaagaaagaagactatgacaacatagaacaagggaagaaatagaa
tagtaagcaaaatccaacatgtaggatagcataatattcactaagaaaac
ccataatggcattatgcaatgcaaatcagctccttaaagagatactaaaa
tttcttgagactttaaaaattagtataaataattctaatttagaaaacat
ctgaataa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_67063090_67063849
seq2: B6Ng01-005D07.b_45_808

seq1  GAATTCTGGGCTAGTGGTACCTTGTCACTCTCCTTAAATTAATAGGCAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGGGCTAGTGGTACCTTGTCACTCTCCTTAAATTAATAGGCAAG  50

seq1  CAGTTTCAGCCCCAGAGTCTCAGCTAGGAAGACCATGCTGTTGCAGATCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTTCAGCCCCAGAGTCTCAGCTAGGAAGACCATGCTGTTGCAGATCT  100

seq1  GGGAACTTGCCTGTGGGATTCCTGTGGTAAATGAAAAGATTGCTAGGACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAACTTGCCTGTGGGATTCCTGTGGTAAATGAAAAGATTGCTAGGACT  150

seq1  CCACACTCATGCATGTCCTGTTCAACTTAGCAAAAGCTTTAACAGCAAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACACTCATGCATGTCCTGTTCAACTTAGCAAAAGCTTTAACAGCAAGA  200

seq1  GTCTTAGAGGAACTTGTTAGATTCCAAGTGAGTTAGTATAAGGAGAGTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTAGAGGAACTTGTTAGATTCCAAGTGAGTTAGTATAAGGAGAGTTT  250

seq1  CTAATTGGTAGTTTCTTTTTTTGTTGTTGTTTTGTTTGTTTGTTTTTTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATTGGTAGTTTCTTTTTTTGTTGTTGTTTTGTTTGTTTGTTTTTTCA  300

seq1  AGACAGGGTTTCTCTGTGTAGCCCTGGCTGTCCTGAAACTCACTTTGTAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGGGTTTCTCTGTGTAGCCCTGGCTGTCCTGAAACTCACTTTGTAG  350

seq1  ACCAGGCTGGCCTCGAACTCAGAAATCCGCCTGCCTCTGCCTTCCAAGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGGCTGGCCTCGAACTCAGAAATCCGCCTGCCTCTGCCTTCCAAGTG  400

seq1  CTGGGATTAAAGGCATGCGCCACCATGCCCGGCTTTAATTGGTAGTTTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGATTAAAGGCATGCGCCACCATGCCCGGCTTTAATTGGTAGTTTCT  450

seq1  AAATGACAGTTGCAACATTGGGATACAATGGTTAAGAAAGTAATTAGACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGACAGTTGCAACATTGGGATACAATGGTTAAGAAAGTAATTAGACA  500

seq1  AAGTTTCAGCATATCTTTAAGAAGTGACATCACTCTCAAAATAACAACAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTTCAGCATATCTTTAAGAAGTGACATCACTCTCAAAATAACAACAG  550

seq1  CAACAACAACAACAACAACAAAAAGTGACTTCACATGTACACAGCCAGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAACAACAACAACAACAAAAAGTGACTTCACATGTACACAGCCAGAG  600

seq1  AGAAGCTGAATAGAAGCTAGAAATAGAAACATAAAGAATCCAGTAGACTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGCTGAATAGAAGCTAGAAATAGAAACATAAAGAATCCAGTAGACTT  650

seq1  GGAAATTTAAAAACCCTTTCTAAAAACCTTGGGCTGAAGAAGAAATTATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAATTTAAAAACCCTTTCTAAAAACCTTGGGCTGAAGAAGAAATTATG  700

seq1  GG-TTGAAGAAGAACTCACAGTGGAATA-TTTGTAAATTTCTAATGA-CA  747
      || ||||||||||||||||||||||||| ||||||||||||||||||  |
seq2  GGTTTGAAGAAGAACTCACAGTGGAATATTTTGTAAATTTCTAATGATGA  750

seq1  GTGAAAA-TGCTGA  760
      ||||||| ||||||
seq2  GTGAAAATTGCTGA  764

seq1: chr13_67239150_67239956
seq2: B6Ng01-005D07.g_70_877 (reverse)

seq1  TTATTCAGATGTTTTCTAAATTAGATTAATTTATACTTAGTTTTTAAGTA  50
      ||||||||||||||||||||||||| | ||||||||| | |||| |||| 
seq2  TTATTCAGATGTTTTCTAAATTAGAATTATTTATACTAATTTTTAAAGT-  49

seq1  CTCAAGAAATTTTAGTATCTCTTTAAGGAGCTGATTTGCATTGCATAATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAGAAATTTTAGTATCTCTTTAAGGAGCTGATTTGCATTGCATAATG  99

seq1  CCATTATGGGTTTTCTTAGTGAATATTATGCTTTCCTACATGTTTGATTT  150
      |||||||||||||||||||||||||||||||| ||||||||||| |||||
seq2  CCATTATGGGTTTTCTTAGTGAATATTATGCTATCCTACATGTTGGATTT  149

seq1  TGCTTACTATTCTATTTCTT-CCTTGTTCTATGTTGTCATAGTCTTCTTT  199
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  TGCTTACTATTCTATTTCTTCCCTTGTTCTATGTTGTCATAGTCTTCTTT  199

seq1  CTTCAAGGGAGTCTACATGATTTTCAC-TTATTCTGTGTTTTAAATTGTA  248
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  CTTCAAGGGAGTCTACATGATTTTCACTTTATTCTGTGTTTTAAATTGTA  249

seq1  GTTCACTGAATACAGGTATAGAAAATTGAATGTAGCTTATCATTAATACA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCACTGAATACAGGTATAGAAAATTGAATGTAGCTTATCATTAATACA  299

seq1  GACAAATGCAAGTAGGAGTAAATGTTTGTTTGTTTTTTAAACTATCAGTA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAATGCAAGTAGGAGTAAATGTTTGTTTGTTTTTTAAACTATCAGTA  349

seq1  CAGATATACAGATTTTGGATCTGTTTTCATTAATTTCTCAACTCTTACTC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATATACAGATTTTGGATCTGTTTTCATTAATTTCTCAACTCTTACTC  399

seq1  ATAGGGGGAAATAGCTCTACATGCAAAGAAGTTTCTGAGAGGGAAAAAGT  448
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  ATAGGGGGAAATAGCTCTACATGCAAAGAAGTTTCTAAGAGGGAAAAAGT  449

seq1  ACTTGGAAATCAGCAGATAATTCATTTAGGTTTGAAGCCATATAGTTGTG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGGAAATCAGCAGATAATTCATTTAGGTTTGAAGCCATATAGTTGTG  499

seq1  AAGAGGTTGGCAAGTCCTTTTGTTTTTCATCATTACTTTCTGAACACAAA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGGTTGGCAAGTCCTTTTGTTTTTCATCATTACTTTCTGAACACAAA  549

seq1  AGAATCCATACAGGAGAAAAACCCTACAAGTATGAAACATGTAGCAAGGC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATCCATACAGGAGAAAAACCCTACAAGTATGAAACATGTAGCAAGGC  599

seq1  CTTCCATGTTCCATCAAAACTTTCTCAACACAAGATAATTCGCACAGGAG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCATGTTCCATCAAAACTTTCTCAACACAAGATAATTCGCACAGGAG  649

seq1  AAAAACCCTACAACTGTGAAGTATGTGCCAAGGCCTTCAAATATCCATCA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACCCTACAACTGTGAAGTATGTGCCAAGGCCTTCAAATATCCATCA  699

seq1  AGACTTTCAAAACATAAGATAATTCATAAAGGTGAGAAGCCATACAAATG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTTTCAAAACATAAGATAATTCATAAAGGTGAGAAGCCATACAAATG  749

seq1  TAAAGTATGTGGAAAGGCCTTCTTCTCTCCATCATCTATTTGTCAACACG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGTATGTGGAAAGGCCTTCTTCTCTCCATCATCTATTTGTCAACACG  799

seq1  AGAGAATTC  807
      |||||||||
seq2  AGAGAATTC  808