BAC Information

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BAC

Clone NameB6Ng01-012F22
Chromosome3 (Build37)13 (Build37)
Map Location 41,059,037 - 41,059,73775,604,627 - 75,605,649
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC100040882, Intu, Slc25a31, Hspa4l, Plk4, Mfsd8, LOC100039027, LOC100039043, 3110057O12Rik, 1700034I23Rik, Larp2, Pgrmc2
Downstream geneEG666004, Ppia-ps3_337.1, LOC100039115, Phf17, Sclt1, D3Ertd751e, LOC666031
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-012F22.bB6Ng01-012F22.g
ACCDH847483DH847484
length9561,006
definitionDH847483|Mus musculus domesticus DNA, BAC clone: B6Ng01-012F22, 5' end.DH847484|Mus musculus domesticus DNA, BAC clone: B6Ng01-012F22, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(41,059,037 - 41,059,737)(75,604,627 - 75,605,649)
sequence
gaattctttgttcagctctgagccccatttttaatggggttatttgattt
tctggagcccaccttcttgagttctttatatatattggatattagtcccc
tatccgatttgggataggtcaagatcctttcccaatcttttggtggtctt
tttgtcttattgacggtgtcttttgccttgcagaagctttgcaattttat
gaggtcccatttatcgattctcgatcttacagcacaagccattgctgtac
tattcaggaatttttcccctgtacccatatcttcgaggcttttccctact
ttctcctctataagtttcagtgtctctggttttatgtggagttccttaat
ccacttagatttgaccttagtacaaggagataggaatggatcaattctca
ttcttctacatgataaccgccagttgtgccagcaccatttgttgaaaatg
ctgtcttttttccactggatggttttagctcccttgtcaaagatcaagtg
accataggtgtgtgggttcatttctgggtcttcaattctattccattggt
ctacttgtctgtcactataacagtaccatgcagtttttatcacaattgct
ctgtagtaaagctttaggtcaggcatggtgattccaccagagtttctttt
atccttgagaagagtttttgctatcctaggttttttgttattccagatga
atctgccgattgccctttctaattcattgaaaagcttttttttttttttt
ttttttttaagtaaaaataaggtttgtttgaataaagccccatggtacgg
ggaaacgtttatgtgtgtgaaggatattgtacattacttattccaaaact
gcattatgttccctactggcagttgttataccaattgccagtgatcctgt
ccatgaagaaataactagccttcaagtccaaacattctgcacagcactag
acatta
gaattccaaaggtcacacaattgcagaaactatctgtagctggcacaacc
ccacccctgctagagcatgagacaaatcgtagacatccgatgtgaaacat
tcccctatctccatactgtggattaaaataaaaatgttttcccatactat
ttctatgttttttaaagaaaccaaaattctcagtacagtaacaacatcct
ttctgcacttccccttggcttagcagcctttttttttttttttttttttt
tttttttttttttttttttttaaagctgcctggcagcagcaacagtgctg
tccctatctctccccctctctttgcagcatcatcaatggaaaaaccagca
cattgctctttgatttgggggtaatactaaaaacaaaacaagaaagccaa
atgagggcacctgggggcattctgccccttggacttttctgtttcacctt
ggtgtatggaggggatatacagttctttcataataagccctgtatgcctg
cctttgcaatgtctccaatttccttccctcttttctttctttctttcttt
ctttctttctttctttctttctttctttctttctttctttctttcctcct
ggcattacatatatatatatacatacatatatatacatacacatatatat
accccttccatctctcttaacacattcttgaacactgagagttggctaaa
gcaaccaggtactgctttctgtgcaactcagagcatgtttgcacaaacat
atacatgatgacattttgcctctcgggttcttagtttccttgggcccaca
tttacttgtttttccttgatgagtggcccagtacccattcagttctcaca
taccccagcactgtctctgaagaaccgatgtagtcagtgtctgttaagag
tagactgctatctctttctctttctttcataactttggcactgttcacta
tacaaactacgattaaactgggtagatgtcatcttctcacttcttcataa
gaaaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_41059037_41059737
seq2: B6Ng01-012F22.b_43_743 (reverse)

seq1  ATTCATCTGGAATAACAAAAAACCTAGGATAGCAAAAACTCTTCTCAAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATCTGGAATAACAAAAAACCTAGGATAGCAAAAACTCTTCTCAAGG  50

seq1  ATAACAGAACCTCTGGTGGAATCACCATGCCTGACCTAAAGCTTTACTAC  100
      |||| |||| ||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAAGAAACTCTGGTGGAATCACCATGCCTGACCTAAAGCTTTACTAC  100

seq1  AGAGCAATTGTGATAAAAACTGCATGGTACTGGTATAGTGACAGACAAGC  150
      |||||||||||||||||||||||||||||||| |||||||||||||||| 
seq2  AGAGCAATTGTGATAAAAACTGCATGGTACTGTTATAGTGACAGACAAGT  150

seq1  AGACCAATGGAATAGAATTGAAGACTCAGAAACGAATCCACACACCTATG  200
      ||||||||||||||||||||||||| |||||| ||| |||||||||||||
seq2  AGACCAATGGAATAGAATTGAAGACCCAGAAATGAACCCACACACCTATG  200

seq1  GTCACTTGATCTTCGACAAGGGAGCTAAAACCATCCAGTGGAAAAAAGAC  250
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  GTCACTTGATCTTTGACAAGGGAGCTAAAACCATCCAGTGGAAAAAAGAC  250

seq1  AGCATTTTCAACAAATGGTGCTGGCACAACTGGTTGTTATCATGTAGAAG  300
      |||||||||||||||||||||||||||||||||  |||||||||||||||
seq2  AGCATTTTCAACAAATGGTGCTGGCACAACTGGCGGTTATCATGTAGAAG  300

seq1  AATGCGAATTGATCCACTCCTATCTCCTTGTACTAAGGTCAAATCTAAGT  350
      |||| ||||||||||| |||||||||||||||||||||||||||||||||
seq2  AATGAGAATTGATCCATTCCTATCTCCTTGTACTAAGGTCAAATCTAAGT  350

seq1  GGATCAAGGAACGCCACATAAAACCAGAGACACTGAAACTTATAGAGGAG  400
      |||| ||||||| |||||||||||||||||||||||||||||||||||||
seq2  GGATTAAGGAACTCCACATAAAACCAGAGACACTGAAACTTATAGAGGAG  400

seq1  AAAGTGGGGAAAAGCCTTGAAGATATGGTCACAGGGGAAAAATTCCTGCA  450
      ||||| ||||||||||| ||||||||||  |||||||||||||||||| |
seq2  AAAGTAGGGAAAAGCCTCGAAGATATGGGTACAGGGGAAAAATTCCTGAA  450

seq1  TAGAACAGCAATGGCTTGTGCTGTAAGATTGAGAATAGACAAATGGGACC  500
      ||| ||||||||||||||||||||||||| |||||| || ||||||||||
seq2  TAGTACAGCAATGGCTTGTGCTGTAAGATCGAGAATCGATAAATGGGACC  500

seq1  TCATGAAACTGCAAAGCTTCTGCAAGGCAAAAGACACCGTCAATAAGACA  550
      |||| ||| |||||||||||||||||||||||||||||||||||||||||
seq2  TCATAAAATTGCAAAGCTTCTGCAAGGCAAAAGACACCGTCAATAAGACA  550

seq1  AAAAG-GCACCAACAGATTGGGAAAGGATCTTTACCTATCCTAAATCAGA  599
      |||||  |||||| |||||||||||||||||| |||||||| ||||| ||
seq2  AAAAGACCACCAAAAGATTGGGAAAGGATCTTGACCTATCCCAAATCGGA  600

seq1  TAGGGGACTAATATCCAATATATATCAAGAACTCAAGAAGGTGGATTCCA  649
      ||||||||||||||||||||||||| ||||||||||||||||||  ||||
seq2  TAGGGGACTAATATCCAATATATATAAAGAACTCAAGAAGGTGGGCTCCA  650

seq1  GAAAATCAAATAACCCCATTAAAAAATGGGGCTCAGAGCTAAACAAAGAA  699
      |||||||||||||||||||| ||||||||||||||||||| |||||||||
seq2  GAAAATCAAATAACCCCATT-AAAAATGGGGCTCAGAGCTGAACAAAGAA  699

seq1  TT  701
      ||
seq2  TT  701

seq1: chr13_75604627_75605649
seq2: B6Ng01-012F22.g_65_1070

seq1  GAATTCCAAAGGTCACACAATTGCAGAAACTATCTGTAGCTGGCACAACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAAGGTCACACAATTGCAGAAACTATCTGTAGCTGGCACAACC  50

seq1  CCACCCCTGCTAGAGCATGAGACAAATCGTAGACATCCGATGTGAAACAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCCCTGCTAGAGCATGAGACAAATCGTAGACATCCGATGTGAAACAT  100

seq1  TCCCCTATCTCCATACTGTGGATTAAAATAAAAATGTTTTCCCATACTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCTATCTCCATACTGTGGATTAAAATAAAAATGTTTTCCCATACTAT  150

seq1  TTCTATGTTTTTTAAAGAAACCAAAATTCTCAGTACAGTAACAACATCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTATGTTTTTTAAAGAAACCAAAATTCTCAGTACAGTAACAACATCCT  200

seq1  TTCTGCACTTCCCCTTGGCTTAGCAGCCTTTTTTTTTTTTTTTTTTTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGCACTTCCCCTTGGCTTAGCAGCCTTTTTTTTTTTTTTTTTTTTTT  250

seq1  TTTTTTTTTTTTTTTTTTTTTAATGCTGCCTGGCAGCAGCAGCAGTGCTG  300
      ||||||||||||||||||||||| ||||||||||||||||| ||||||||
seq2  TTTTTTTTTTTTTTTTTTTTTAAAGCTGCCTGGCAGCAGCAACAGTGCTG  300

seq1  TCCCTATCTCTCCCACTCTCTTTGCAGCATCATCAATGGATAAACCAGCA  350
      |||||||||||||| ||||||||||||||||||||||||| |||||||||
seq2  TCCCTATCTCTCCCCCTCTCTTTGCAGCATCATCAATGGAAAAACCAGCA  350

seq1  CATTGCTCTTTGATTTGGTGGTAATACTAAGAACAGAACAAGAAAGCCAA  400
      |||||||||||||||||| ||||||||||| |||| ||||||||||||||
seq2  CATTGCTCTTTGATTTGGGGGTAATACTAAAAACAAAACAAGAAAGCCAA  400

seq1  ATGAGGTCACCTGGGTGCATTCTGCCCCTTGGACTTTTCTGTTTCACCTT  450
      |||||| |||||||| ||||||||||||||||||||||||||||||||||
seq2  ATGAGGGCACCTGGGGGCATTCTGCCCCTTGGACTTTTCTGTTTCACCTT  450

seq1  GGTGTATGGAGGGGATATACAGTTCTTTCATAATAAGCCCTGTATGCCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTATGGAGGGGATATACAGTTCTTTCATAATAAGCCCTGTATGCCTG  500

seq1  CCTTTGCAATGTCTCCAATTTCCTTCCTTCTTTTCTTTCTTTCTTTCTTT  550
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  CCTTTGCAATGTCTCCAATTTCCTTCCCTCTTTTCTTTCTTTCTTTCTTT  550

seq1  CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCCT  600
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTCCT  600

seq1  GTCATTACATATATATATATACATACATATATATACATACACATATATAT  650
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATTACATATATATATATACATACATATATATACATACACATATATAT  650

seq1  ACACATTCCATCTCTCTTAACACATTCTTGAACACTGAGAGTTGGCTAAA  700
      || | |||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCTTCCATCTCTCTTAACACATTCTTGAACACTGAGAGTTGGCTAAA  700

seq1  GCAACCAGGTACTGCTTCCTGTGCAACTCAGAGCATGTTTGCACAAACAT  750
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  GCAACCAGGTACTGCTTTCTGTGCAACTCAGAGCATGTTTGCACAAACAT  750

seq1  ATACATGATGACATTTTGCCTCTCGGTTTCTTAGTATTCCTT-GGCCCAC  799
      |||||||||||||||||||||||||| |||||||| |||||| |||||||
seq2  ATACATGATGACATTTTGCCTCTCGGGTTCTTAGT-TTCCTTGGGCCCAC  799

seq1  ATTTACTTGTTTTTCCTTGATGAGTGGCCCAGTACCCATTCAGTTCTCAC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTACTTGTTTTTCCTTGATGAGTGGCCCAGTACCCATTCAGTTCTCAC  849

seq1  ATACCCCAGCACTGTCTCTGAAGAAACCGATGTAGTTCAGTGTCTGTT-A  898
      ||||||||||||||||||||||| ||||||||||| |||||||||||| |
seq2  ATACCCCAGCACTGTCTCTGAAG-AACCGATGTAG-TCAGTGTCTGTTAA  897

seq1  GAGTTAAGACTGCTATCTCTTTCTCTTTCTTTCAATAAACTTTTGCACTG  948
      ||||  ||||||||||||||||||||||||||||   |||||| ||||||
seq2  GAGT--AGACTGCTATCTCTTTCTCTTTCTTTCA--TAACTTTGGCACTG  943

seq1  GTCACTTATACATAACTTTACGATATAAACTGGGTAGAAATGTCAATTCT  998
       |||| |||||| |||  |||||| ||||||||||||  ||||||  |||
seq2  TTCAC-TATACA-AAC--TACGAT-TAAACTGGGTAG--ATGTCA--TCT  984

seq1  TCTTCACTTCTTCCACTAAGAAACA  1023
      || ||||||||||   |||||||||
seq2  TC-TCACTTCTTC--ATAAGAAACA  1006