BAC Information

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BAC

Clone NameB6Ng01-013A22
Chromosome2 (Build37)13 (Build37)
Map Location 44,967,409 - 44,967,50727,762,673 - 27,763,787
singlet/doubletsingletsinglet
Overlap geneZeb2
Upstream geneArhgap15, Gtdc1
Downstream geneLOC100042661, LOC100041337, LOC666604
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-013A22.bB6Ng01-013A22.g
ACCDH847975DH847976
length2271,109
definitionDH847975|Mus musculus domesticus DNA, BAC clone: B6Ng01-013A22, 5' end.DH847976|Mus musculus domesticus DNA, BAC clone: B6Ng01-013A22, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(44,967,409 - 44,967,507)(27,762,673 - 27,763,787)
sequence
tgagagcaggagaaatagtcttcatcagggaagagtgtaccaatttgtaa
tcactaaatgttcagccttaaaagcattcacacatatgtaatgttatata
ggctgggtaggttgtgtgtgtgtgtttgtgtgtgtgtgtgtgtgtgagtg
agagagagatagagagagagagagagagagagagagagagatagagaatg
aaaaagcagctatgaattttagaaaaa
gaattctaaaggtatttcaattaaaacagacaattcaaagctaggatcca
tatatgagaaacaaaaatatctttgtgggtctcagttacctaactaagaa
taattatttccagctacatcaaatttcattatatttagagctcacaaaaa
atgtgcatatataccacattttcattattcatttatcagttgataggtct
aagctatttcaaattcttgcctattgtgcatagtgcagaaataaagttgt
gtaaaaagtataatagtgtccttttagtctacttcgaggggttgtatagc
tggctcataaagtagatcaatatcagtatttttgaggaagctctacatca
atttccatagtgggtacactatattacattctgataatggggatactttg
tagaaatgacctatgtaaaatgttagagacaccagttcacagatatgatt
caaacttaataatatattttttaaaagacagaagatataaatccatagca
tttacctctctctgtttcttgactgtggaaacaccatgacaagctttctc
acaactcctaactcaatgaagtgtgtcaacttgaaggataacccaacaaa
aactttctgagaaaagtcaatcttcttaggtctttgattataatagagaa
aaggaagaatttgttcaaaggtcattagtattcactgccttgaatcattt
tcacaagatgtccttgatacagaaagtgaatactatctgtacttgatagg
agtaaatgggcatgtactccatatttatctgcagaacctggaatcttctg
tatacctggcaccaggatggtactaagacaaaattctgtttatcacccat
atatttctgtagaaaggctcaaggttttgttttttttgtttttgaacaaa
gtaaagacacctaagttcaacttaatttcctgcctttagtgacattctcc
aatgtggtatatatcatctatacgatataacaaactacttcaaactatta
tcatgagtacaacttgacactgctatgactttagtagcatgcttacttta
gatttacaaatgttcttggcggatatatattatattaagtagtaaatata
tatatatat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_44967409_44967507
seq2: B6Ng01-013A22.b_164_256

seq1  TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAG  50
      ||||||||||||| |||||||||||||||||||||| |||||||||| ||
seq2  TGTGTGTGTGTGTTTGTGTGTGTGTGTGTGTGTGAGTGAGAGAGAGATAG  50

seq1  AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGAGTTCCATGAAAAA  99
      ||||||||||||||||||||||||||||| ||||       ||||||||
seq2  AGAGAGAGAGAGAGAGAGAGAGAGAGAGATAGAG------AATGAAAAA  93

seq1: chr13_27762673_27763787
seq2: B6Ng01-013A22.g_66_1174

seq1  GAATTCTAAAGGTATTTCAATTAAAACAGACAATTCAAAGCTAGGATCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAAAGGTATTTCAATTAAAACAGACAATTCAAAGCTAGGATCCA  50

seq1  TATATGAGAAACAAAAATATCTTTGTGGGTCTCAGTTACCTAACTAAGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATGAGAAACAAAAATATCTTTGTGGGTCTCAGTTACCTAACTAAGAA  100

seq1  TAATTATTTCCAGCTACATCAAATTTCATTATATTTAGAGCTCACAAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTATTTCCAGCTACATCAAATTTCATTATATTTAGAGCTCACAAAAA  150

seq1  ATGTGCATATATACCACATTTTCATTATTCATTTATCAGTTGATAGGTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGCATATATACCACATTTTCATTATTCATTTATCAGTTGATAGGTCT  200

seq1  AAGCTATTTCAAATTCTTGCCTATTGTGCATAGTGCAGAAATAAAGTTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTATTTCAAATTCTTGCCTATTGTGCATAGTGCAGAAATAAAGTTGT  250

seq1  GTAAAAAGTATAATAGTGTCCTTTTAGTCTACTTCGAGGGGTTGTATAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAAAGTATAATAGTGTCCTTTTAGTCTACTTCGAGGGGTTGTATAGC  300

seq1  TGGCTCATAAAGTAGATCAATATCAGTATTTTTGAGGAAGCTCTACATCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTCATAAAGTAGATCAATATCAGTATTTTTGAGGAAGCTCTACATCA  350

seq1  ATTTCCATAGTGGGTACACTATATTACATTCTGATAATGGGGATACTTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCCATAGTGGGTACACTATATTACATTCTGATAATGGGGATACTTTG  400

seq1  TAGAAATGACCTATGTAAAATGTTAGAGACACCAGTTCACAGATATGATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAATGACCTATGTAAAATGTTAGAGACACCAGTTCACAGATATGATT  450

seq1  CAAACTTAATAATATATTTTTTAAAAGACAGAAGATATAAATCCATAGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACTTAATAATATATTTTTTAAAAGACAGAAGATATAAATCCATAGCA  500

seq1  TTTACCTCTCTCTGTTTCTTGACTGTGGAAACACCATGACAAGCTTTCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACCTCTCTCTGTTTCTTGACTGTGGAAACACCATGACAAGCTTTCTC  550

seq1  ACAACTCCTAACTCAATGAAGTGTGTCAACTTGAAGGATAACCCAACAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACTCCTAACTCAATGAAGTGTGTCAACTTGAAGGATAACCCAACAAA  600

seq1  AACTTTCTGAGAAAAGTCAATCTTCTTAGGTCTTTGATTATAATAGAGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTTCTGAGAAAAGTCAATCTTCTTAGGTCTTTGATTATAATAGAGAA  650

seq1  AAGGAAGAATTTGTTCAAAGGTCATTAGTATTCACTGCCTTGAATCATTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAGAATTTGTTCAAAGGTCATTAGTATTCACTGCCTTGAATCATTT  700

seq1  TCACAAGATGTCCTTGATACAGAAAGTGAATACTATCTGTACTTGATAGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAAGATGTCCTTGATACAGAAAGTGAATACTATCTGTACTTGATAGG  750

seq1  AGTAAATGGGCATGTACTCCATATTTATCTGCAGAACCTGGAATCTTCTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAATGGGCATGTACTCCATATTTATCTGCAGAACCTGGAATCTTCTG  800

seq1  TATACCTGGCACCAGGATGGTACTAAGACAAAATTCTGTTTATCACCCAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACCTGGCACCAGGATGGTACTAAGACAAAATTCTGTTTATCACCCAT  850

seq1  ATATTTCTGTAGAAAAGGCTCAGGGTTTTG-TTTTTTTGTTTTTGAACAA  899
      |||||||||||| ||||||||| ||||||| |||||||||||||||||||
seq2  ATATTTCTGTAG-AAAGGCTCAAGGTTTTGTTTTTTTTGTTTTTGAACAA  899

seq1  AGTAAAGAACACCTAAGTTCAACTTAATTTCCTGCCTTTAGGTGACATTC  949
      ||||||| |||||||||||||||||||||||||||||||| |||||||||
seq2  AGTAAAG-ACACCTAAGTTCAACTTAATTTCCTGCCTTTA-GTGACATTC  947

seq1  TCCAATTGTGGTATATATCATCTATACGATATAACAAACTACTTCAAACC  999
      ||||| |||||||||||||||||||||||||||||||||||||||||| |
seq2  TCCAA-TGTGGTATATATCATCTATACGATATAACAAACTACTTCAAA-C  995

seq1  TATTATCATTGAGTACAAACTTGACACTGCCTAATGACTTTAGTAGGCAT  1049
      |||||||| ||||||| |||||||||||||   |||||||||||| ||||
seq2  TATTATCA-TGAGTAC-AACTTGACACTGC--TATGACTTTAGTA-GCAT  1040

seq1  GCTTACCTTTTAGATTTAACAAAATGTCTTTTAGCAGGATATATA-TATA  1098
      ||||||  ||||||||||   |||||| | || || ||||||||| ||||
seq2  GCTTAC--TTTAGATTTA--CAAATGT-TCTTGGC-GGATATATATTATA  1084

seq1  --------TATATATATATATATAT  1115
              || ||||||||||||||
seq2  TTAAGTAGTAAATATATATATATAT  1109