BAC Information

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BAC

Clone NameB6Ng01-014N15
Chromosome13 (Build37)
Map Location 4,759,057 - 4,760,119
singlet/doubletsinglet
Overlap genenone
Upstream geneCalml3, Calm4, Calm5, LOC100039279, Net1, Tubal3, Ucn3, Akr1c14, Akr1c18, LOC100039262, Akr1c13, Akr1c19, Akr1c12, Akr1c6, Akr1c20, Akr1c21, Akr1e1, EG432721
Downstream geneEG432723
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-014N15.bB6Ng01-014N15.g
ACCDH849277DH849278
length1,1051,046
definitionDH849277|Mus musculus domesticus DNA, BAC clone: B6Ng01-014N15, 5' end.DH849278|Mus musculus domesticus DNA, BAC clone: B6Ng01-014N15, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctctggatggccttcccttcagtttctgttccactcttcattcct
gtatttcctttccacagaagcaattctgtgttaaaatattggagctgggt
gggtggccccattccacaatcaaggcgccattcctaacttctggatatgg
tttttacaggttctccctcccctttgtggggtagttcagctaatgtcatc
cccgtggggtcctggtaggcacttgctttcttggcatctgggactttctg
gttgctacccccagttccccattgctacacacctttgttcaatttcctga
ccctttgttcatcacctgatacaccctccatctcctccaatatctgattc
cacctcttctttttccctttccacacttctattcctcccatgtccttccc
accctctgcttcccataattatattgtttccccttctatgtaggcctgaa
gcatcctctctttggtcttccttccccttgagcttcatgtggtccatgag
ttgtattgtgggtattccatgctctttgcctaatatccacttatcagtta
gtacataatatgtgcgtccttttgttattgagttacctaactcaggatga
tattttctttctctctttctttctttctttctttctttctttctttcttt
ctttctttctttctttctttcttccttccttccttccttcctttccttac
ataccttccttcctttccttccttcctccctccctccctccctccctttc
ctctctctttctttctttctttttttcttttgttttttgagacagggttt
cttctgttttatccctgggctgtctagaacctcgcctttgaagacaattc
tggccttcgaactcagaaatctgcctgcttctgcctctgagtgctgggga
tttaacacatgtgccaacaccgtccagctgcatgtgttcttctatatgtt
ggacctcttatggtaattgtccaggattagatgctgggtcctcatatcta
atatgcacagtttctgatggacatgccaaacgatttcagaatgggttctg
gcctgctgtggaaatccaccaaggcatgatgagatggaactctccttcct
cacca
gaattctctagaagaaagaaagaaacaaagaaaaaagggaaggaaagaaa
aacggaaaaaaacaaggaaggaaactatttctaactcatttgttggggcc
ggcctgcggctctcatgtctgggttcgagcctgggaggcatcttcgagct
gaaagaaaaggaaactaggcggagagagagagagatggagccaagacagt
attctgatcaaggctcaaatttttaatggcagacacgctttataaaagac
aggggaagcccattccggccaaatcatccttggagcccagctgcaggtga
ccacatgtaggctcctgaacagctaggctgactcccagcaggtagcagca
gcagcagtggtagaacaatagagtttatcctgggaggctggctccaccct
aagtaatctcctcagtgacaacaaagtcaaggtctggctcagcctgcttc
aggcttgtgggaggctacaagccaatataccattataaacaaaaaacaaa
caaacaaacaaacaaacaaacaaaaaatgtacctcaaaagagaagaacct
gcacagatctttgccccttttgaaggaaatgcaataaataacacaataaa
ataggcttatgtgctttgactttgagaattacctaagagattcagggata
gtttaccacatgactattaggcaatgtaacgcacactaatcctataagcc
acaaaatatacttattacagatcaacaaacctaaaagtgagaaaacataa
tatattaaaacactcagtaaacaaggaataacttcaattaattcaacttt
agatactgtttaaagaatacttgtagaagcaagaaaacagagattatagc
caacaatatgcttactgcatcttgtagcagaaattctagcaatgctaatt
atggaagaacagaggtaaacacacccataaaaccatgtctacttcatttg
atgtgctctatggtaggaattacctcagagtcataaactgtcgagtgatt
aacagtttaagagacaagatcatgtgatactagtgtatttagaaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_4759057_4760119
seq2: B6Ng01-014N15.g_68_1113

seq1  GAATTCTCTAGAAGAAAGAAAGAAACAAAGAAAAAAGGGAAGGAAAGAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTAGAAGAAAGAAAGAAACAAAGAAAAAAGGGAAGGAAAGAAA  50

seq1  AACGGAAAAAAACAAGGAAGGAAACTATTTCTAACTCATTTGTTGGGGCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGGAAAAAAACAAGGAAGGAAACTATTTCTAACTCATTTGTTGGGGCC  100

seq1  GGCCTGCGGCTCTCATGTCTGGGTTCGAGCCTGGGAGGCATCTTCGAGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTGCGGCTCTCATGTCTGGGTTCGAGCCTGGGAGGCATCTTCGAGCT  150

seq1  GAAAGAAAAGGAAACTAGGCGGAGAGAGAGAGAGATGGAGCCAAGACAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAAAAGGAAACTAGGCGGAGAGAGAGAGAGATGGAGCCAAGACAGT  200

seq1  ATTCTGATCAAGGCTCAAATTTTTAATGGCAGACACGCTTTATAAAAGAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTGATCAAGGCTCAAATTTTTAATGGCAGACACGCTTTATAAAAGAC  250

seq1  AGGGGAAGCCCATTCCGGCCAAATCATCCTTGGAGCCCAGCTGCAGGTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGAAGCCCATTCCGGCCAAATCATCCTTGGAGCCCAGCTGCAGGTGA  300

seq1  CCACATGTAGGCTCCTGAACAGCTAGGCTGACTCCCAGCAGGTAGCAGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACATGTAGGCTCCTGAACAGCTAGGCTGACTCCCAGCAGGTAGCAGCA  350

seq1  GCAGCAGTGGTAGAACAATAGAGTTTATCCTGGGAGGCTGGCTCCACCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCAGTGGTAGAACAATAGAGTTTATCCTGGGAGGCTGGCTCCACCCT  400

seq1  AAGTAATCTCCTCAGTGACAACAAAGTCAAGGTCTGGCTCAGCCTGCTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAATCTCCTCAGTGACAACAAAGTCAAGGTCTGGCTCAGCCTGCTTC  450

seq1  AGGCTTGTGGGAGGCTACAAGCCAATATACCATTATAAACAAAAAACAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTTGTGGGAGGCTACAAGCCAATATACCATTATAAACAAAAAACAAA  500

seq1  CAAACAAACAAACAAACAAACAAAAAATGTACCTCAAAAGAGAAGAACCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACAAACAAACAAACAAACAAAAAATGTACCTCAAAAGAGAAGAACCT  550

seq1  GCACAGATCTTTGCCCCTTTTGAAGGAAATGCAATAAATAACACAATAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACAGATCTTTGCCCCTTTTGAAGGAAATGCAATAAATAACACAATAAA  600

seq1  ATAGGCTTATGTGCTTTGACTTTGAGAATTACCTAAGAGATTCAGGGATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGCTTATGTGCTTTGACTTTGAGAATTACCTAAGAGATTCAGGGATA  650

seq1  GTTTACCACATGACTATTAGGCAATGTAACGCACACTAATCCTATAAGCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTACCACATGACTATTAGGCAATGTAACGCACACTAATCCTATAAGCC  700

seq1  ACAAAATATACTTATTACAGATCAACAAACCTAAAAGTGAGAAAACATAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAATATACTTATTACAGATCAACAAACCTAAAAGTGAGAAAACATAA  750

seq1  TATATTAAAACACTCAGTAAACAAGGAATAACTTCAATTAATTCAACTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTAAAACACTCAGTAAACAAGGAATAACTTCAATTAATTCAACTTT  800

seq1  AGATACTGTTTAAAGAATACTTGTAGAAGCAAGAAAACAGAGATTATAGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATACTGTTTAAAGAATACTTGTAGAAGCAAGAAAACAGAGATTATAGC  850

seq1  CAACAATATGCTTACTGCATCTTGTAGCAGAAATTCTAGCAATGCTAATT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAATATGCTTACTGCATCTTGTAGCAGAAATTCTAGCAATGCTAATT  900

seq1  ATGGAAAGAACAGAGGTAAACAACACCCATAAAACCATGTCTACTTCATT  950
      |||| |||||||||||||||| ||||||||||||||||||||||||||||
seq2  ATGG-AAGAACAGAGGTAAAC-ACACCCATAAAACCATGTCTACTTCATT  948

seq1  TGATGTGCTCTTATTGGTAGGAATTA-CTCAGGAAGTCATAAAACTGTCA  999
      |||||||||||   |||||||||||| |||||  |||||| |||||||| 
seq2  TGATGTGCTCT--ATGGTAGGAATTACCTCAG--AGTCAT-AAACTGTC-  992

seq1  GAGTTGATATAACCAGTTTAAAGAGACAAGATCAATGTGAATAAACTAGT  1049
      ||| |||| ||| |||||| ||||||||||||| |||||   | ||||| 
seq2  GAG-TGAT-TAA-CAGTTT-AAGAGACAAGATC-ATGTG---ATACTAG-  1033

seq1  TGTATTTAAGAACA  1063
      ||||||| ||||||
seq2  TGTATTT-AGAACA  1046