BAC Information

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BAC

Clone NameB6Ng01-015B16
Chromosome13 (Build37)
Map Location 98,171,202 - 98,331,054
singlet/doubletdoublet
Overlap geneLOC667676, LOC100039691, LOC100039704, EG328314
Upstream gene1200014M14Rik, 9330128J19Rik, Polk, Col4a3bp, Hmgcr, LOC100039456, LOC625662, 1700029F12Rik, EG620648, 5730427N09Rik, LOC100039663, Gfm2, Hexb, Enc1
Downstream geneLOC100039526, LOC100039740, Rgnef, LOC667703, Utp15, Ankra2, EG667718, Btf3, Foxd1, LOC100039827, LOC100039665, LOC100039854
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-015B16.bB6Ng01-015B16.g
ACCDH849454DH849455
length1,1651,049
definitionDH849454|Mus musculus domesticus DNA, BAC clone: B6Ng01-015B16, 5' end.DH849455|Mus musculus domesticus DNA, BAC clone: B6Ng01-015B16, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(98,329,884 - 98,331,054)(98,171,202 - 98,172,246)
sequence
gaattcccttggaggaattaccccagtgtccaaacagagcatcacttagt
cattgggcaatgctctcaggagacaggacaaggtccagagaacagctgca
tatctgtgacctactcccacacagggcagtacactcatacctgggctttc
tccagacaataactgtgacttccaaaagcccagcatcctcagctatatca
tgtggatgatgtagaggcaatgttattaaattaccttctaattaattggt
tctcagtgttaccaagacagattgctagtggctgagtaccttgattctgt
gatttagttattacccagtctaactctaaagaattaaaagcatctgcaaa
gtcaatatgggaaggcatgtgaccagcacttagccattgttagtccaggt
tctacacatgcctgtgcttctgtcataggttaaaggtgagaatgcatgac
gacaaactagaaaatctttacaacagccatctcccaagagttgacagtgc
tctttatatagaagcccttccctaaatactgtctggttggaaatggtgtg
tatattcaggtatatagagagctcacacgaagcccaacatcctactatat
ccacttgaatccattctcaggcctcggtttgccccaagtcttcccagccc
aagctgtggcttctgtattgctaggcactcgcattctccactctgcctca
gagaaaccatgctgaaaaaaaaactgtgttgaagtctatggtgttgcatt
cgacatctcaaaataagatgccagagagttttcgtgtcagaagattctcg
gagcccggtttgaccagagcctcttttaaactcaggtatcatctgcaatc
tatggggttgatacagcaggtgcttcagtctctttctcagactaacccac
tcatcagaaagatctcatttgctgtggaggcaactctgggtcaaatgagt
cacccccatggcctcatccatcatcaacttttccttagtgagttctctca
caatctccgagtcccttcagaacacactcgacctgagctcctgtcccctc
actctgcagaagtttcattggactgtctcttctctctaacttctgaacta
tgttttctctccttccactaatactgcgggatgcttctgtccgtctgaaa
tataatttcctggtt
gaattcaggcatgtaggtgatgtggggaagcttctagatggtggcctaca
cagcccaaatttgaattctagttctgccgtctgctcactttatggctttc
atgaataccatcttcctctcactctgcctccatcatatctgctgccaggg
actcttggggagcatcatttaggctaatgcctaggactgcttgctcaggg
atgaagtatctcaaggaagtgctgctatgcacaccaggggcttgctggta
agcaaagggcagcacttgagcggtgggtgcgctgttaccaaaggtgagca
gttctgatccgtcggtatctcatttgtttacagggggaatgctgagaaac
tatctgatgatgcttcttgggggagggtaagaagcacggttacaagacag
ctacagactgattctctaaattaccctgggcaatgtctgagctagcttga
aagtcgatggtctgtgctcaagtaaggtttggaaggctgttgtaacgtaa
taccaactggcttcagtaactagacttcatcgtcctcgcagttctgtagt
gtaagagtctaacatggtgcaacacagatggtttctgcttctccttggct
tatagacaaaccctgtatcctccaatggcctttccacttgcacatggagc
agatctttctttcctttctcatagaccccatcccattggattagggcccc
aaccttctaagctcatttagtttttcatatctctttaaaggctctgtctc
ttgggggaacacggcgctgttgacctgacaactgactgacagacaagcta
aatgtatttccttgatgttggactttattatcctaaagagactcaggagg
gcaggtgtacggtttttcattatttagagattactcattgcagatttagg
agagactgctcctggatgatgggctaattcatggtgtattttgtagaaga
gctgacctacaacaactacttcttattatatataaccccctttttattct
catctgttctgggaaggctttgaaggccaatttatggtcaccgttccca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_98329884_98331054
seq2: B6Ng01-015B16.b_47_1211 (reverse)

seq1  AACCAAGGGAAATTTATTTTCAGAACGGGACAGAAAGCAT-CCGCAGTAT  49
      |||||  |||||||   |||||||   |||||| |||||| |||||||||
seq2  AACCA--GGAAATTATATTTCAGA--CGGACAG-AAGCATCCCGCAGTAT  45

seq1  TAGTTGGTAAGGAAGAGAAAACATAAGTTCTGAAGGTTAGAGAGAAGAGA  99
      ||||  | |||| ||||||||||| ||||| ||| |||||||||||||||
seq2  TAGT--GGAAGG-AGAGAAAACAT-AGTTCAGAA-GTTAGAGAGAAGAGA  90

seq1  CAGTCCAATGAAACTTCTGCAGAGGTGAGGGGACAGGAGCTCAGGTCGAG  149
      ||||||||||||||||||||||| ||||||||||||||||||||||||| 
seq2  CAGTCCAATGAAACTTCTGCAGA-GTGAGGGGACAGGAGCTCAGGTCGA-  138

seq1  GTGTGTTTCTGAAGGGACTCGGAGA-TGTGAGAGAACTCACTAAGG-AAA  197
      ||||| ||||||||||||||||||| |||||||||||||||||||| |||
seq2  GTGTG-TTCTGAAGGGACTCGGAGATTGTGAGAGAACTCACTAAGGAAAA  187

seq1  GGTGATGATGGATGAGG-CAT-GGGGTGAGCTCATCTGAACCAAGAGTTG  245
      | ||||||||||||||| ||| ||||||| ||||| || ||| |||||||
seq2  GTTGATGATGGATGAGGCCATGGGGGTGA-CTCATTTG-ACCCAGAGTTG  235

seq1  CCT-CACAGCAAATGAGATC-TTCTGATGAGTTGGGTAAGTCTGAG-GAG  292
      ||| |||||||||||||||| |||||||||| ||||| ||||||||  ||
seq2  CCTCCACAGCAAATGAGATCTTTCTGATGAG-TGGGTTAGTCTGAGAAAG  284

seq1  AGACTGAAGCACCTGCTGTATCAA-CCCATAGATTGCAGATGATACCTGA  341
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  AGACTGAAGCACCTGCTGTATCAACCCCATAGATTGCAGATGATACCTGA  334

seq1  GTTTAACAGAGGCTCTGGTCAAACC-GGCTCCGAGAATCTTCTGACACGA  390
      |||||| |||||||||||||||||| ||||||||||||||||||||||||
seq2  GTTTAAAAGAGGCTCTGGTCAAACCGGGCTCCGAGAATCTTCTGACACGA  384

seq1  AAACTCTCTGGCATCTTATTTTGAGATGTCGAATGCAACACCATAGACTT  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTCTCTGGCATCTTATTTTGAGATGTCGAATGCAACACCATAGACTT  434

seq1  CAACACAGTTTTTTTTTCAGCATGGTTTCTCTGAGGCAGAGTGGAGAATG  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACACAGTTTTTTTTTCAGCATGGTTTCTCTGAGGCAGAGTGGAGAATG  484

seq1  CGAGTGCCTAGCAATACAGAAGCCACAGCTTGGGCTGGGAAGACTTGGGG  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGTGCCTAGCAATACAGAAGCCACAGCTTGGGCTGGGAAGACTTGGGG  534

seq1  CAAACCGAGGCCTGAGAATGGATTCAAGTGGATATAGTAGGATGTTGGGC  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACCGAGGCCTGAGAATGGATTCAAGTGGATATAGTAGGATGTTGGGC  584

seq1  TTCGTGTGAGCTCTCTATATACCTGAATATACACACCATTTCCAACCAGA  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCGTGTGAGCTCTCTATATACCTGAATATACACACCATTTCCAACCAGA  634

seq1  CAGTATTTAGGGAAGGGCTTCTATATAAAGAGCACTGTCAACTCTTGGGA  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTATTTAGGGAAGGGCTTCTATATAAAGAGCACTGTCAACTCTTGGGA  684

seq1  GATGGCTGTTGTAAAGATTTTCTAGTTTGTCGTCATGCATTCTCACCTTT  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGCTGTTGTAAAGATTTTCTAGTTTGTCGTCATGCATTCTCACCTTT  734

seq1  AACCTATGACAGAAGCACAGGCATGTGTAGAACCTGGACTAACAATGGCT  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTATGACAGAAGCACAGGCATGTGTAGAACCTGGACTAACAATGGCT  784

seq1  AAGTGCTGGTCACATGCCTTCCCATATTGACTTTGCAGATGCTTTTAATT  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGCTGGTCACATGCCTTCCCATATTGACTTTGCAGATGCTTTTAATT  834

seq1  CTTTAGAGTTAGACTGGGTAATAACTAAATCACAGAATCAAGGTACTCAG  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAGAGTTAGACTGGGTAATAACTAAATCACAGAATCAAGGTACTCAG  884

seq1  CCACTAGCAATCTGTCTTGGTAACACTGAGAACCAATTAATTAGAAGGTA  940
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTAGCAATCTGTCTTGGTAACACTGAGAACCAATTAATTAGAAGGTA  934

seq1  ATTTAATAACATTGCCTCTACATCATCCACATGATATAGCTGAGGATGCT  990
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAATAACATTGCCTCTACATCATCCACATGATATAGCTGAGGATGCT  984

seq1  GGGCTTTTGGAAGTCACAGTTATTGTCTGGAGAAAGCCCAGGTATGAGTG  1040
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTTTTGGAAGTCACAGTTATTGTCTGGAGAAAGCCCAGGTATGAGTG  1034

seq1  TACTGCCCTGTGTGGGAGTAGGTCACAGATATGCAGCTGTTCTCTGGACC  1090
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGCCCTGTGTGGGAGTAGGTCACAGATATGCAGCTGTTCTCTGGACC  1084

seq1  TTGTCCTGTCTCCTGAGAGCATTGCCCAATGACTAAGTGATGCTCTGTTT  1140
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCCTGTCTCCTGAGAGCATTGCCCAATGACTAAGTGATGCTCTGTTT  1134

seq1  GGACACTGGGGTAATTCCTCCAAGGGAATTC  1171
      |||||||||||||||||||||||||||||||
seq2  GGACACTGGGGTAATTCCTCCAAGGGAATTC  1165

seq1: chr13_98171202_98172246
seq2: B6Ng01-015B16.g_68_1116

seq1  GAATTCAGGCATGTAGGTGATGTGGGGAAGCTTCTAGATGGTGGCCTACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGCATGTAGGTGATGTGGGGAAGCTTCTAGATGGTGGCCTACA  50

seq1  CAGCCCAAATTTGAATTCTAGTTCTGCCGTCTGCTCACTTTATGGCTTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCCAAATTTGAATTCTAGTTCTGCCGTCTGCTCACTTTATGGCTTTC  100

seq1  ATGAATACCATCTTCCTCTCACTCTGCCTCCATCATATCTGCTGCCAGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATACCATCTTCCTCTCACTCTGCCTCCATCATATCTGCTGCCAGGG  150

seq1  ACTCTTGGGGAGCATCATTTAGGCTAATGCCTAGGACTGCTTGCTCAGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTTGGGGAGCATCATTTAGGCTAATGCCTAGGACTGCTTGCTCAGGG  200

seq1  ATGAAGTATCTCAAGGAAGTGCTGCTATGCACACCAGGGGCTTGCTGGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAGTATCTCAAGGAAGTGCTGCTATGCACACCAGGGGCTTGCTGGTA  250

seq1  AGCAAAGGGCAGCACTTGAGCGGTGGGTGCGCTGTTACCAAAGGTGAGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAAGGGCAGCACTTGAGCGGTGGGTGCGCTGTTACCAAAGGTGAGCA  300

seq1  GTTCTGATCCGTCGGTATCTCATTTGTTTACAGGGGGAATGCTGAGAAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTGATCCGTCGGTATCTCATTTGTTTACAGGGGGAATGCTGAGAAAC  350

seq1  TATCTGATGATGCTTCTTGGGGGAGGGTAAGAAGCACGGTTACAAGACAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTGATGATGCTTCTTGGGGGAGGGTAAGAAGCACGGTTACAAGACAG  400

seq1  CTACAGACTGATTCTCTAAATTACCCTGGGCAATGTCTGAGCTAGCTTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACAGACTGATTCTCTAAATTACCCTGGGCAATGTCTGAGCTAGCTTGA  450

seq1  AAGTCGATGGTCTGTGCTCAAGTAAGGTTTGGAAGGCTGTTGTAACGTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCGATGGTCTGTGCTCAAGTAAGGTTTGGAAGGCTGTTGTAACGTAA  500

seq1  TACCAACTGGCTTCAGTAACTAGACTTCATCGTCCTCGCAGTTCTGTAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCAACTGGCTTCAGTAACTAGACTTCATCGTCCTCGCAGTTCTGTAGT  550

seq1  GTAAGAGTCTAACATGGTGCAACACAGATGGTTTCTGCTTCTCCTTGGCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGAGTCTAACATGGTGCAACACAGATGGTTTCTGCTTCTCCTTGGCT  600

seq1  TATAGACAAACCCTGTATCCTCCAATGGCCTTTCCACTTGCACATGGAGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGACAAACCCTGTATCCTCCAATGGCCTTTCCACTTGCACATGGAGC  650

seq1  AGATCTTTCTTTCCTTTCTCATAGACCCCATCCCATTGGATTAGGGCCCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCTTTCTTTCCTTTCTCATAGACCCCATCCCATTGGATTAGGGCCCC  700

seq1  AACCTTCTAAGCTCATTTAG-TTTTCATATCTCTTTAAAGGCTCTGTCTC  749
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  AACCTTCTAAGCTCATTTAGTTTTTCATATCTCTTTAAAGGCTCTGTCTC  750

seq1  TTGGGGGAACACGGCGCTGTTGACCTGACAACTGACTGACAGACAAGGCT  799
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  TTGGGGGAACACGGCGCTGTTGACCTGACAACTGACTGACAGACAA-GCT  799

seq1  AAATGTATTTCCTTGATGTTGGACTTTATTATCCTAAAGAGACTCAGGAG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTATTTCCTTGATGTTGGACTTTATTATCCTAAAGAGACTCAGGAG  849

seq1  GGCAGGTGTACGG-TTTTCATTTTTTAGAGATTACTCATTGCAGATTTAG  898
      ||||||||||||| |||||||| |||||||||||||||||||||||||||
seq2  GGCAGGTGTACGGTTTTTCATTATTTAGAGATTACTCATTGCAGATTTAG  899

seq1  GAGAGACTGCT-CTGGATGATGGGCTAATCTCATGGTGTA-TTTGTAGAA  946
      ||||||||||| ||||||||||||||||| |||||||||| |||||||||
seq2  GAGAGACTGCTCCTGGATGATGGGCTAAT-TCATGGTGTATTTTGTAGAA  948

seq1  GAAGCTGAGCAGACAAC-ACTACTTCTATTTATATATAAACCCCCATTTT  995
      | |||||| |  ||||| |||||||||  |||||||| ||||||| ||||
seq2  G-AGCTGA-CCTACAACAACTACTTCTTATTATATAT-AACCCCCTTTTT  995

seq1  ATTCTCATCTGTTCTGTG-AGGCTTTG-ATGCCAATTT-TTGTCACCG-T  1041
      |||||||||||||||| | |||||||| | |||||||| | ||||||| |
seq2  ATTCTCATCTGTTCTGGGAAGGCTTTGAAGGCCAATTTATGGTCACCGTT  1045

seq1  CCCA  1045
      ||||
seq2  CCCA  1049