BAC Information

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BAC

Clone NameB6Ng01-016E22
Chromosome13 (Build37)
Map Location 85,645,151 - 85,646,256
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC382786, LOC100042841, LOC100042851, LOC100042857, LOC100042862, Ccnh, Rasa1
Downstream geneLOC435373, LOC675662, Cox7c, LOC100042887, LOC100042893
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-016E22.bB6Ng01-016E22.g
ACCDH850307DH850308
length1,0291,115
definitionDH850307|Mus musculus domesticus DNA, BAC clone: B6Ng01-016E22, 5' end.DH850308|Mus musculus domesticus DNA, BAC clone: B6Ng01-016E22, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcagttggaattttgatggggattgcattgaatctgcacattgctt
tttggcaagatagccatttttactatattgatactactcatccatgagca
tgggagatctttccatcttctgagatcttctttaacttctttcttcagag
acttaaagtttttaaatcatttacttcgttagttagagtcatgccaaggt
attttatattacttgtgactattgagaagggtgttgtttccctaatttct
ctctcagcctgtttatcctctgtgtagagaaaggccattgacttgagtta
attttatatccagctacttcattgaagctgtttatcaggtttaggagttc
tctggtgcgatttttagggtcatgtatatatactatcatatcatctgcaa
aaagtgatattttgacttcttcctttccaatttgtatcccctttatctcc
ttttgttgttgaattgctctgcctaggacttcaagtacaatgttgaatag
gtagggagaatgtggacagccttgtctagtccctgattttactgagattg
cttccagcttctcaccatttactttgatgttggctactggtttgctgtag
attgcttttatcgtgtttaggtatgggtcttgaattcttgatctttccaa
gacttttatcacgaatgagtgttggattttgtcatatgctttctccacat
ctaaggagatgatcatgtggcttttgtctttgagttggtttatataatgg
attatgttgatggatttccgtatattaaactatccctgcatccctggaat
gaaacctacttggtcaggatggatgattcttttgatgtgttcttggattc
ggttagtgagaatgttgagctttactaaagtctctttatgaatgtggctg
ccccatttggagcagagatatcagaattgagagttcctctggaagatttt
actttgagagtatgaagtgaccctcctgtcttttttgatgaacttgtgct
ggaattcattttattgataattaagaatt
gaattctttcttgaaaccacaccaagggctttcccagttattagtggata
ccaacaacaacacaatgtcaccatggtgaaagaagactggggggtagctt
tctgctcttccttaaatgataggttgtatggcttacttatacttccatat
atgcgaaattcctcagtaaaataagtactagtttgtttcggtgatgcatg
attgaagtaaacctattccttgatgctaagatactataatttgaaatctc
acactgttataaaaagtctaaagaggtgaactgctgttttgaccaagata
gtgaaattgaattacaatttcataatttggttgcattcttcaaacacttt
taattttagattatttttgtttgttagtttcccttcaaaggaatagttgt
gttttgttttgtttttatttttgtttttgtttttttccatgtaaatgaat
caaatcctgttaaacaacatggcttcctcagatcctagaactgggctagt
gttctgctaagttgtggactatattgcagccaaagcactcgttttaggaa
atgactggtatcaataatgcataaaaatgtttattccaagagaatgaaag
atgaaactgatagcctgacattaccagtaactgataagcctttacaaaag
tcatcacagggcttatcacaaataaccacctgaaatgctggtaattgtag
gaagaaggctgtttgttcttgcttaaggagataggaggaatttctcccaa
tcctacacttaatcaaccctttatggcccagtcaatgtactaagtgactt
acaagtagtatcttaatcaatagggtaactgtggtggataataacatgac
ctccatttcacaattatgggcaatttgaacacagggcaattgacttttct
tgtctttgaaataatgattaaatacaaaacagctcttaccctttaatatt
tgatttggtgcataatattaaatgttaaagtgtgtacttggtagagagca
ggtcatggtcactagttacctgttaatttcaggtactttgttctgtatat
ttcactggtggtcttgcaagaactttgctccaggtacctaaatgccttat
tccgtcgacagtcta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_85645151_85646256
seq2: B6Ng01-016E22.g_70_1184

seq1  GAATTCTTTCTTGAAACCACACCAAGGGCTTTCCCAGTTATTAGTGGATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCTTGAAACCACACCAAGGGCTTTCCCAGTTATTAGTGGATA  50

seq1  CCAACAACAACACAATGTCACCATGGTGAAAGAAGACTGGGGGGTAGCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACAACAACACAATGTCACCATGGTGAAAGAAGACTGGGGGGTAGCTT  100

seq1  TCTGCTCTTCCTTAAATGATAGGTTGTATGGCTTACTTATACTTCCATAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTCTTCCTTAAATGATAGGTTGTATGGCTTACTTATACTTCCATAT  150

seq1  ATGCGAAATTCCTCAGTAAAATAAGTACTAGTTTGTTTCGGTGATGCATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCGAAATTCCTCAGTAAAATAAGTACTAGTTTGTTTCGGTGATGCATG  200

seq1  ATTGAAGTAAACCTATTCCTTGATGCTAAGATACTATAATTTGAAATCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAAGTAAACCTATTCCTTGATGCTAAGATACTATAATTTGAAATCTC  250

seq1  ACACTGTTATAAAAAGTCTAAAGAGGTGAACTGCTGTTTTGACCAAGATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTGTTATAAAAAGTCTAAAGAGGTGAACTGCTGTTTTGACCAAGATA  300

seq1  GTGAAATTGAATTACAATTTCATAATTTGGTTGCATTCTTCAAACACTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAATTGAATTACAATTTCATAATTTGGTTGCATTCTTCAAACACTTT  350

seq1  TAATTTTAGATTATTTTTGTTTGTTAGTTTCCCTTCAAAGGAATAGTTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTTAGATTATTTTTGTTTGTTAGTTTCCCTTCAAAGGAATAGTTGT  400

seq1  GTTTTGTTTTGTTTTTATTTTTGTTTTTGTTTTTTTCCATGTAAATGAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTGTTTTGTTTTTATTTTTGTTTTTGTTTTTTTCCATGTAAATGAAT  450

seq1  CAAATCCTGTTAAACAACATGGCTTCCTCAGATCCTAGAACTGGGCTAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATCCTGTTAAACAACATGGCTTCCTCAGATCCTAGAACTGGGCTAGT  500

seq1  GTTCTGCTAAGTTGTGGACTATATTGCAGCCAAAGCACTCGTTTTAGGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTGCTAAGTTGTGGACTATATTGCAGCCAAAGCACTCGTTTTAGGAA  550

seq1  ATGACTGGTATCAATAATGCATAAAAATGTTTATTCCAAGAGAATGAAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACTGGTATCAATAATGCATAAAAATGTTTATTCCAAGAGAATGAAAG  600

seq1  ATGAAACTGATAGCCTGACATTACCAGTAACTGATAAGCCTTTACAAAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAACTGATAGCCTGACATTACCAGTAACTGATAAGCCTTTACAAAAG  650

seq1  TCATCACAGGGCTTATCACAAATAACCACCTGAAATGCTGGTAATTGTAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCACAGGGCTTATCACAAATAACCACCTGAAATGCTGGTAATTGTAG  700

seq1  GAAGAAGGCTGTTTGTTCTTGCTTAAGGAGATAGGAGGAATTTCTCCCAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAAGGCTGTTTGTTCTTGCTTAAGGAGATAGGAGGAATTTCTCCCAA  750

seq1  TCCTACACTTAATCAACCCTTTATGGCCCAGTCAATGTACTAAGTGACTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTACACTTAATCAACCCTTTATGGCCCAGTCAATGTACTAAGTGACTT  800

seq1  ACAAGTAGTATCTTAATCAATA-GGTAACTGTGGTGGATAATAACATGAC  849
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  ACAAGTAGTATCTTAATCAATAGGGTAACTGTGGTGGATAATAACATGAC  850

seq1  CTCCATTTCACAATTAT-GGCAATTTGAACACAGGGCAATTGAC-TTTCT  897
      ||||||||||||||||| |||||||||||||||||||||||||| |||||
seq2  CTCCATTTCACAATTATGGGCAATTTGAACACAGGGCAATTGACTTTTCT  900

seq1  TGTCTTTGAAATAATGATTAAATAC-AAACAGCTCTTACCCTTTATATTT  946
      ||||||||||||||||||||||||| |||||||||||||||||||   ||
seq2  TGTCTTTGAAATAATGATTAAATACAAAACAGCTCTTACCCTTTAATATT  950

seq1  TGATTTGTTGCATAATATTAAATGTTAAAGTGTGTACTTTGGTAGAGAGC  996
      ||||||| ||||||||||||||||||||||||||||| ||||||||||||
seq2  TGATTTGGTGCATAATATTAAATGTTAAAGTGTGTAC-TTGGTAGAGAGC  999

seq1  AAGTTCATGGTCACTAGTTA-CTGTTAGGTTTCAGGTAC-TTGTTCTGTA  1044
       || |||||||||||||||| ||||||  |||||||||| ||||||||||
seq2  -AGGTCATGGTCACTAGTTACCTGTTA-ATTTCAGGTACTTTGTTCTGTA  1047

seq1  -ATTTCACTGGTGGTC-TGC-AGAACTTTGCTCCA-GTA-CTTAATG-CT  1088
       ||||||||||||||| ||| |||||||||||||| ||| || |||| ||
seq2  TATTTCACTGGTGGTCTTGCAAGAACTTTGCTCCAGGTACCTAAATGCCT  1097

seq1  TATTCGTTCGACAGTCTA  1106
      |||||  |||||||||||
seq2  TATTCCGTCGACAGTCTA  1115