BAC Information

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BAC

Clone NameB6Ng01-017C15
Chromosome13 (Build37)4 (Build37)
Map Location 32,247,073 - 32,247,14386,257,840 - 86,258,698
singlet/doubletsingletsinglet
Overlap geneGmds
Upstream geneLOC100041266, G630018N14Rik, LOC100042491, Foxq1, LOC100041312, Foxf2, Foxc1, 4930548F15Rik, LOC666212
Downstream geneWrnip1, Serpinb1a, Serpinb1-ps1, Serpinb1c, Serpinb6b, Serpinb9, Serpinb9b, Serpinb1b, LOC628301, Serpinb9c
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-017C15.bB6Ng01-017C15.g
ACCDH850924DH850925
length77859
definitionDH850924|Mus musculus domesticus DNA, BAC clone: B6Ng01-017C15, 5' end.DH850925|Mus musculus domesticus DNA, BAC clone: B6Ng01-017C15, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(32,247,073 - 32,247,143)(86,257,840 - 86,258,698)
sequence
gaattcactttgtagaccaggctagcctagaactcacagaaatttgactg
cctctgcctcccaagtgctgagattaa
gaattcagggtcatcttcctttgggaagggagttcaaggccagaggaggc
taaaagaaatctcgacttgcaacctccacgaccaaagaaacatttgataa
taaaaattttgccaagcactctagatgaggtgatcaatgaacaactccat
cggcccctgtgactcttgcccattaattcatatagtaggaaggcaggtac
agtcttcgacgccagactgcgctacataaagttagagctacatagcaaga
tcctgcctttttggttttgctttgttttatttcgagacagggtttctttg
tgtagctctggctgtcccggaaatcagtagtgttctcgaactaacaaagt
tcttctcctctgagtactgggattaaaggagtacaccgctgcctccaccg
gacaagaccctgtcttaaaataaaggaaaagatgatttgtttagggccat
acacctgcatcactcactataaggagctacaatgtagcttttactgaaca
gcaatcacaacccgagcaacagaaacctaaaacgcaaagaatccggaact
aaggccgggagggctctagaaaacacccggtttccggaccttggggcaat
tggctggtcacgcaatgcttttgtgggtcttatagtttctctcagggact
tcatgtgcccggagacagggatgcattgcatggtgggagattgagttcct
cttaggaagaccagtcccggaagtcgggactgcgcctgctcctgcgcagt
gtagtcttccgcaagcgcggagtcttggtttgcgtggagcgctgcagtca
ctgtctgtttttctgggcgcgttcggccttttgtggtgggatggctctcg
aaaggaggc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_32247073_32247143
seq2: B6Ng01-017C15.b_46_118 (reverse)

seq1  TTAATCTCAGCACTCGGGAGGCAGAGGCAGGCAGATTTC--TGAGTTCTA  48
      |||||||||||||| ||||||||||||||| || |||||  |||||||||
seq2  TTAATCTCAGCACTTGGGAGGCAGAGGCAGTCAAATTTCTGTGAGTTCTA  50

seq1  GGCCAGCCTGGTCTACAAAGTGA  71
      ||| |||||||||||||||||||
seq2  GGCTAGCCTGGTCTACAAAGTGA  73

seq1: chr4_86257840_86258698
seq2: B6Ng01-017C15.g_68_926 (reverse)

seq1  GCCTCCTCTCCGAGAGCCATCCCACCACAAAAGGCCGAACGCGCCCAGAA  50
      ||||||| | ||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCCT-TTCGAGAGCCATCCCACCACAAAAGGCCGAACGCGCCCAGAA  49

seq1  AAACAGACAGTGACTGCAGCGCTCCACGCAAACCAAGACTCCCGCGCTTG  100
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  AAACAGACAGTGACTGCAGCGCTCCACGCAAACCAAGACT-CCGCGCTTG  98

seq1  CGGAAGACTACACTGCGCAGGCGCAGGCGCAGTCCCGACTTCCGGGACTG  150
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  CGGAAGACTACACTGCGCAGGAGCAGGCGCAGTCCCGACTTCCGGGACTG  148

seq1  GTCTTCCTAAGAGG-ACTCAATCTCCCACCATGCAATGCATCCCTGTCTC  199
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  GTCTTCCTAAGAGGAACTCAATCTCCCACCATGCAATGCATCCCTGTCTC  198

seq1  CGGGCACATGAAGTCCCTGAGAGAAACTATAAGACCCAC-AAAGCATTGC  248
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  CGGGCACATGAAGTCCCTGAGAGAAACTATAAGACCCACAAAAGCATTGC  248

seq1  GTGACCAGCCAATTGCCCCAAGGTCCGGAAACCGGGTGTTTTCTAGAGCC  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACCAGCCAATTGCCCCAAGGTCCGGAAACCGGGTGTTTTCTAGAGCC  298

seq1  CTCCCGGCCTTAGTTCCGGATTCTTTGCGTTTTAGGTTTCTGTTGCTCGG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCGGCCTTAGTTCCGGATTCTTTGCGTTTTAGGTTTCTGTTGCTCGG  348

seq1  GTTGTGATTGCTGTTCAGTAAAAGCTACATTGTAGCTCCTTATAGTGAGT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTGATTGCTGTTCAGTAAAAGCTACATTGTAGCTCCTTATAGTGAGT  398

seq1  GATGCAGGTGTATGGCCCTAAACAAATCATCTTTTCCTTTATTTTAAGAC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCAGGTGTATGGCCCTAAACAAATCATCTTTTCCTTTATTTTAAGAC  448

seq1  AGGGTCTTGTCCGGTGGAGGCAGCGGTGTACTCCTTTAATCCCAGTACTC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTCTTGTCCGGTGGAGGCAGCGGTGTACTCCTTTAATCCCAGTACTC  498

seq1  AGAGGAGAAGAACTTTGTTAGTTCGAGAACACTACTGATTTCCGGGACAG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGAGAAGAACTTTGTTAGTTCGAGAACACTACTGATTTCCGGGACAG  548

seq1  CCAGAGCTACACAAAGAAACCCTGTCTCGAAATAAAACAAAGCAAAACCA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAGCTACACAAAGAAACCCTGTCTCGAAATAAAACAAAGCAAAACCA  598

seq1  AAAAGGCAGGATCTTGCTATGTAGCTCTAACTTTATGTAGCGCAGTCTGG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGCAGGATCTTGCTATGTAGCTCTAACTTTATGTAGCGCAGTCTGG  648

seq1  CGTCGAAGACTGTACCTGCCTTCCTACTATATGAATTAATGGGCAAGAGT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTCGAAGACTGTACCTGCCTTCCTACTATATGAATTAATGGGCAAGAGT  698

seq1  CACAGGGGCCGATGGAGTTGTTCATTGATCACCTCATCTAGAGTGCTTGG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGGGGCCGATGGAGTTGTTCATTGATCACCTCATCTAGAGTGCTTGG  748

seq1  CAAAATTTTTATTATCAAATGTTTCTTTGGTCGTGGAGGTTGCAAGTCGA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATTTTTATTATCAAATGTTTCTTTGGTCGTGGAGGTTGCAAGTCGA  798

seq1  GATTTCTTTTAGCCTCCTCTGGCCTTGAACTCCCTTCCCAAAGGAAGATG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTCTTTTAGCCTCCTCTGGCCTTGAACTCCCTTCCCAAAGGAAGATG  848

seq1  ACCCTGAATTC  859
      |||||||||||
seq2  ACCCTGAATTC  859