BAC Information

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BAC

Clone NameB6Ng01-017J10
Chromosome13 (Build37)
Map Location 80,360,524 - 80,361,685
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC666925, LOC382780, EG666933
Downstream geneArrdc3, LOC666964, LOC100043074, LOC218368, LOC666979, EG666984, Gpr98
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-017J10.bB6Ng01-017J10.g
ACCDH851232DH851233
length1,143743
definitionDH851232|Mus musculus domesticus DNA, BAC clone: B6Ng01-017J10, 5' end.DH851233|Mus musculus domesticus DNA, BAC clone: B6Ng01-017J10, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttatctgttaaggaaaattaagctaattaaatcatttaggctac
caggaatctctacaatttcttaagcacattggataatatagctcacatat
attgactctcattttgctgtaaaagattctttttttctttaaattcataa
cctaaagtaaccacataccattcttctattacaaagatagcaaagtggaa
gagtactcttctcttgggaacgtactaacctaaatatttaactctaatca
ggtctttgcagaagattcttacatcacattaacctttacataattatcca
atactgcataaaaggattattaaattgaaactccagttgataaaataaaa
aaatggaggttaagtatcttctaaaaaatactaaagtgaggtaaatattg
ccataaccctatttatgtaactctcaaaataaatatataagcagataata
gaataagtttcaccgttgttaatgatatatatcaaaccacatttgctgtg
ttcctgtgtcatctccaggtatttttcacatatgcctttgatggttgcat
gaataactcaataattaacaaatattgaactaatttactagaatagattt
atttagcccatggattctgaggctctggttcaaaatcagtatgataatag
agggtaactcaacacagtggaagcccacaagacaacatttttatataaca
aacaaggaaaaatagccaatcttctgcttttatgatattaatttcttatg
agagctatatcagagttccaagagaaatacataaacttctttgaaggcat
gaacagccaggtgacatccatgtagcttatgttttacagcacaatttaaa
accagaaccctgtccacaaagacttcaatgccaagtacccttgggatata
ctcagatcagagagggaagcaacaggcttcatggtatatgggaaaataat
gtttgaggccatataattttctctgtacagatttcacttgtgggttgtta
ggacatgagccatacagagtcctacagtgataacaactagtcatatcata
tgaaatactattttgtaagctttagcaaattacatcagaaatgtcaatgg
tgggtgcagtggaatggtgactatagtcacaagaacctgttgt

gaattcaggaaattcgcagacaaattgatggagctggaaaatataatcct
gtagtgaggtaacccaataagaaaagaacacacatgaaatgcactcactg
ataagtagatattagcctagaaactcggaatacctaagatacaatttaca
gaccatatgaagctcaagatgaaggaagactaaagtgtggatacttcagt
ccttcttagaagtgggaacaaaatacccatgggagaagatacagagacaa
aatatggagcagagactgaaggaaaagtcatccagagactgccccatcta
gggatccatcccatacacagtcaacaaacccagacagtattgtggatgcc
aacaagttcttgctgacagaagcctgatatagctgtctcctgagaggctc
taacattgcctgacaaatacagaggtgggtggtctcaaccacttgactta
gcacagggtccccaatggaggagttagagaaaggactgaaggagctgaag
gggtttgcagaccccaggaagaacataagtatgatctaaccagttcttcc
agagcttccagggactaaaccaccaaccaaagagtacacgtggagggacc
tatggctccagctgcatatgtagcagaggatggcctttttggtcatcaat
gggaggagagatctttggtcctgtgaaggtttgatgcctaaatgtagggt
aatgccgggaccaggaagatggagggagtgggtttggtgagca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_80360524_80361685
seq2: B6Ng01-017J10.b_43_1185

seq1  GAATTCTTATCTGTTAAGGAAAATTAAGCTAATTAAATCATTTAGGCTAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTATCTGTTAAGGAAAATTAAGCTAATTAAATCATTTAGGCTAC  50

seq1  CAGGAATCTCTACAATTTCTTAAGCACATTGGATAATATAGCTCACATAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAATCTCTACAATTTCTTAAGCACATTGGATAATATAGCTCACATAT  100

seq1  ATTGACTCTCATTTTGCTGTAAAAGATTCTTTTTTTCTTTAAATTCATAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGACTCTCATTTTGCTGTAAAAGATTCTTTTTTTCTTTAAATTCATAA  150

seq1  CCTAAAGTAACCACATACCATTCTTCTATTACAAAGATAGCAAAGTGGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAAAGTAACCACATACCATTCTTCTATTACAAAGATAGCAAAGTGGAA  200

seq1  GAGTACTCTTCTCTTGGGAACGTACTAACCTAAATATTTAACTCTAATCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTACTCTTCTCTTGGGAACGTACTAACCTAAATATTTAACTCTAATCA  250

seq1  GGTCTTTGCAGAAGATTCTTACATCACATTAACCTTTACATAATTATCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTTTGCAGAAGATTCTTACATCACATTAACCTTTACATAATTATCCA  300

seq1  ATACTGCATAAAAGGATTATTAAATTGAAACTCCAGTTGATAAAATAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTGCATAAAAGGATTATTAAATTGAAACTCCAGTTGATAAAATAAAA  350

seq1  AAATGGAGGTTAAGTATCTTCTAAAAAATACTAAAGTGAGGTAAATATTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGGAGGTTAAGTATCTTCTAAAAAATACTAAAGTGAGGTAAATATTG  400

seq1  CCATAACCCTATTTATGTAACTCTCAAAATAAATATATAAGCAGATAATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATAACCCTATTTATGTAACTCTCAAAATAAATATATAAGCAGATAATA  450

seq1  GAATAAGTTTCACCGTTGTTAATGATATATATCAAACCACATTTGCTGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAAGTTTCACCGTTGTTAATGATATATATCAAACCACATTTGCTGTG  500

seq1  TTCCTGTGTCATCTCCAGGTATTTTTCACATATGCCTTTGATGGTTGCAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTGTGTCATCTCCAGGTATTTTTCACATATGCCTTTGATGGTTGCAT  550

seq1  GAATAACTCAATAATTAACAAATATTGAACTAATTTACTAGAATAGATTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAACTCAATAATTAACAAATATTGAACTAATTTACTAGAATAGATTT  600

seq1  ATTTAGCCCATGGATTCTGAGGCTCTGGTTCAAAATCAGTATGATAATAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAGCCCATGGATTCTGAGGCTCTGGTTCAAAATCAGTATGATAATAG  650

seq1  AGGGTAACTCAACACAGTGGAAGCCCACAAGACAACATTTTTATATAACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTAACTCAACACAGTGGAAGCCCACAAGACAACATTTTTATATAACA  700

seq1  AACAAGGAAAAATAGCCAATCTTCTGCTTTTATGATATTAATTTCTTATG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAGGAAAAATAGCCAATCTTCTGCTTTTATGATATTAATTTCTTATG  750

seq1  AGAGCTATATCAGAGTTCCAAGAGAAATACATAAACTTCTTTGAAGGCAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCTATATCAGAGTTCCAAGAGAAATACATAAACTTCTTTGAAGGCAT  800

seq1  GAACAGCCAGGTGACATCCATGTAGCTTATGTTTTACAGCACAATTTAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAGCCAGGTGACATCCATGTAGCTTATGTTTTACAGCACAATTTAAA  850

seq1  ACCAGAACCCTGTCCACAAAGACTTCAATGCCAAGTACCCTTGGGATATA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGAACCCTGTCCACAAAGACTTCAATGCCAAGTACCCTTGGGATATA  900

seq1  CTCAGATCAGAGAGGGAAGCAACAGGCTTCATGGTAATAT-GGAAAATAA  949
      ||||||||||||||||||||||||||||||||||| |||| |||||||||
seq2  CTCAGATCAGAGAGGGAAGCAACAGGCTTCATGGT-ATATGGGAAAATAA  949

seq1  TGTTTGAGGCCAATATAATTTTTCTCTGTACAGATTTTCACTTGTGGGTT  999
      ||||||||||| |||||| ||||||||||||||| |||||||||||||||
seq2  TGTTTGAGGCC-ATATAA-TTTTCTCTGTACAGA-TTTCACTTGTGGGTT  996

seq1  GTTAGGACATGAGCCATAACAGAAGTCCTACAGTGATAACAAACTAGTCA  1049
      ||||||||||||||||| |||| ||||||||||||||||| |||||||||
seq2  GTTAGGACATGAGCCAT-ACAG-AGTCCTACAGTGATAAC-AACTAGTCA  1043

seq1  TATTCATATGAAAATACTTATTTTGTAAAGCTTTAGGCAAAATATACATC  1099
      || ||||||| |||||| |||||||| |||||||| |||||   ||||||
seq2  TA-TCATATG-AAATAC-TATTTTGT-AAGCTTTA-GCAAA--TTACATC  1086

seq1  AGAAAATTGTTCAAT-GTGGTGGCAAGTTGAAATGGTGACTATATAGTCA  1148
      |||||  || ||||| ||||  |||   || |||||||||  ||||||||
seq2  AGAAA--TG-TCAATGGTGGGTGCA--GTGGAATGGTGAC--TATAGTCA  1129

seq1  CAAGAACCTGTTGT  1162
      ||||||||||||||
seq2  CAAGAACCTGTTGT  1143


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