BAC Information

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BAC

Clone NameB6Ng01-017M15
Chromosome13 (Build37)
Map Location 70,986,611 - 71,153,798
singlet/doubletdoublet
Overlap gene8030423J24Rik
Upstream geneEG620143, LOC100042291, 4930520P13Rik, EG633042, BC018507, EG620473, Adamts16
Downstream geneLOC627230, LOC100042360, Irx1
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-017M15.bB6Ng01-017M15.g
ACCDH851371DH851372
length701694
definitionDH851371|Mus musculus domesticus DNA, BAC clone: B6Ng01-017M15, 5' end.DH851372|Mus musculus domesticus DNA, BAC clone: B6Ng01-017M15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(71,153,100 - 71,153,798)(70,986,611 - 70,987,303)
sequence
gaattcctgcccaggactccaagttgggacgggcaaagaacgagggcaca
ctcacaatttccttcgggaaagcctgtggaagagtgacagaaggcagagt
gagcgacataaccatttcctcgtcaatacccatgaacactaagtaccaca
aactcagcagacagacccttcattatgtacatattcaccatcagcccctg
gagccccctatagggagaaagtcagaatctccttgataaaggattacaag
tcaacatacatgacttaaaacatcagtggtccccttagaaagaggacaca
agggctccaggagatagtttggtcagtaaagtgtccactgcacacgtgtt
atgagtccagatccccagaaaccagataagaagccagaatagagtgagca
cgtgtctataagggttagtggtggagagagatggttgtccgtctccaccc
tgaaactgagaaaattcacatttgtgtttagaccttttctagtcctaaca
ggaaaacttaagattttgcctttagtaggaattgtctatggaaatacaaa
aaccccaacagtcaaggtagcccaactcatctagctgaactgaagagctt
gaggttaactgagagagacctctgtttgtgaagacaaaaccatgcacaca
gccacacgacaacaaattcacataacacacacagggagagaggggaaagg
a
gaattcacagggtaggtccctaaggagcacggggcaacaaagaaaggcag
cctacacggtaacatgcaacatcacaaagggcagacaggaaattagggtg
tattcagtgtaacattttgtttgtgagcttcttaaaagtatctgggaaag
gaggaaggtgaggaaggttacactcaaggtcatatttgctcaggcattaa
ctgtgggtcctcctgttttaaccctgttgtttggaaatctctctccatga
aaggagtattgtccatgctgacaaacttcactgcaaacactaactataca
gccattgttgaatcatagctggtgagagaatgcagttggacttcagacta
tgggattctttctctttcctgcatgccccgtatttcctttctgtcccacc
ttagctactgtacaaatttttcatcatgaattgtaatggccagtatcaca
catgaaataatgcgtcggtgttctgtgtgccactacagtgattaactccg
tccccttccacggtgtgaactctatcttggagctgtcactcagacacttt
tgagagtaaaaacctagcctgtgttcttccaagcctcgccacatggtcta
tcatagggcagggggaggagggatgacttagcattctgctttatcccact
gaacccagaggtacagtaactggggaatttggcttgtcaattat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_71153100_71153798
seq2: B6Ng01-017M15.b_48_748 (reverse)

seq1  TCCTT--CCCTCTCTCCCTGTGTGTGTTCTGTGAATTTGTTGTCGTGTGG  48
      |||||  ||||||||||||||||||||| |||||||||||||||||||||
seq2  TCCTTTCCCCTCTCTCCCTGTGTGTGTTATGTGAATTTGTTGTCGTGTGG  50

seq1  CTGTGTGCATGGTTTTGTCTTCACAAACAGAGGTCTCTCTCAGTTAACCT  98
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTGCATGGTTTTGTCTTCACAAACAGAGGTCTCTCTCAGTTAACCT  100

seq1  CAAGCTCTTCAGTTCAGCTAGATGAGTTGGGCTACCTTGACTGTTGGGGT  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCTCTTCAGTTCAGCTAGATGAGTTGGGCTACCTTGACTGTTGGGGT  150

seq1  TTTTGTATTTCCATAGACAATTCCTACTAAAGGCAAAATCTTAAGTTTTC  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTATTTCCATAGACAATTCCTACTAAAGGCAAAATCTTAAGTTTTC  200

seq1  CTGTTAGGACTAGAAAAGGTCTAAACACAAATGTGAATTTTCTCAGTTTC  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTAGGACTAGAAAAGGTCTAAACACAAATGTGAATTTTCTCAGTTTC  250

seq1  AGGGTGGAGACGGACAACCATCTCTCTCCACCACTAACCCTTATAGACAC  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTGGAGACGGACAACCATCTCTCTCCACCACTAACCCTTATAGACAC  300

seq1  GTGCTCACTCTATTCTGGCTTCTTATCTGGTTTCTGGGGATCTGGACTCA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTCACTCTATTCTGGCTTCTTATCTGGTTTCTGGGGATCTGGACTCA  350

seq1  TAACACGTGTGCAGTGGACACTTTACTGACCAAACTATCTCCTGGAGCCC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACACGTGTGCAGTGGACACTTTACTGACCAAACTATCTCCTGGAGCCC  400

seq1  TTGTGTCCTCTTTCTAAGGGGACCACTGATGTTTTAAGTCATGTATGTTG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTCCTCTTTCTAAGGGGACCACTGATGTTTTAAGTCATGTATGTTG  450

seq1  ACTTGTAATCCTTTATCAAGGAGATTCTGACTTTCTCCCTATAGGGGGCT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGTAATCCTTTATCAAGGAGATTCTGACTTTCTCCCTATAGGGGGCT  500

seq1  CCAGGGGCTGATGGTGAATATGTACATAATGAAGGGTCTGTCTGCTGAGT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGGGCTGATGGTGAATATGTACATAATGAAGGGTCTGTCTGCTGAGT  550

seq1  TTGTGGTACTTAGTGTTCATGGGTATTGACGAGGAAATGGTTATGTCGCT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGGTACTTAGTGTTCATGGGTATTGACGAGGAAATGGTTATGTCGCT  600

seq1  CACTCTGCCTTCTGTCACTCTTCCACAGGCTTTCCCGAAGGAAATTGTGA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCTGCCTTCTGTCACTCTTCCACAGGCTTTCCCGAAGGAAATTGTGA  650

seq1  GTGTGCCCTCGTTCTTTGCCCGTCCCAACTTGGAGTCCTGGGCAGGAATT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGCCCTCGTTCTTTGCCCGTCCCAACTTGGAGTCCTGGGCAGGAATT  700

seq1  C  699
      |
seq2  C  701

seq1: chr13_70986611_70987303
seq2: B6Ng01-017M15.g_71_763

seq1  GAATTCACAGGG-AGGTCCCTAAGGAGCACGGGGCAACAAAGAAAGGCAG  49
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  GAATTCACAGGGTAGGTCCCTAAGGAGCACGGGGCAACAAAGAAAGGCAG  50

seq1  CCTACACGGTAACATGCAACATCACAAAGGGCAGACAGGAAATTAGGGTG  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACACGGTAACATGCAACATCACAAAGGGCAGACAGGAAATTAGGGTG  100

seq1  TATTCAGTGTAACATTTTGTTTGTGAGCTTCTTAAAAGTATCTGGGAAAG  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCAGTGTAACATTTTGTTTGTGAGCTTCTTAAAAGTATCTGGGAAAG  150

seq1  GAGGAAGGTGAGGAAGGTTACACTCAAGGTCATATTTGCTCAGGCATTAA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAAGGTGAGGAAGGTTACACTCAAGGTCATATTTGCTCAGGCATTAA  200

seq1  CTGTGGGTCCTCCTGTTTTAACCCTGTTGTTTGGAAATCTCTCTCCATGA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGGGTCCTCCTGTTTTAACCCTGTTGTTTGGAAATCTCTCTCCATGA  250

seq1  AAGGAGTATTGTCCATGCTGACAAACTTCACTGCAAACACTAACTATACA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAGTATTGTCCATGCTGACAAACTTCACTGCAAACACTAACTATACA  300

seq1  GCCATTGTTGAATCATAGCTGGTGAGAGAATGCAGTTGGACTTCAGACTA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATTGTTGAATCATAGCTGGTGAGAGAATGCAGTTGGACTTCAGACTA  350

seq1  TGGGATTCTTTCTCTTTCCTGCATGCCCCGTATTTCCTTTCTGTCCCACC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGATTCTTTCTCTTTCCTGCATGCCCCGTATTTCCTTTCTGTCCCACC  400

seq1  TTAGCTACTGTACAAATTTTTCATCATGAATTGTAATGGCCAGTATCACA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCTACTGTACAAATTTTTCATCATGAATTGTAATGGCCAGTATCACA  450

seq1  CATGAAATAATGCGTCGGTGTTCTGTGTGCCACTACAGTGATTAACTCCG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAAATAATGCGTCGGTGTTCTGTGTGCCACTACAGTGATTAACTCCG  500

seq1  TCCCCTTCCACGGTGTGAACTCTATCTTGGAGCTGTCACTCAGACACTTT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCTTCCACGGTGTGAACTCTATCTTGGAGCTGTCACTCAGACACTTT  550

seq1  TGAGAGTAAAAACCTAGCCTGTGTTCTTCCAAGCCTCGCCACATGGTCTA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAGTAAAAACCTAGCCTGTGTTCTTCCAAGCCTCGCCACATGGTCTA  600

seq1  TCATAGGGCAGGGGGAGGAGGGATGACTTAGCAGATCTGCTTTATCCAAC  649
      |||||||||||||||||||||||||||||||||  |||||||||||| ||
seq2  TCATAGGGCAGGGGGAGGAGGGATGACTTAGCA-TTCTGCTTTATCCCAC  649

seq1  TGAACCCAGAGGTAACAGTAACTGGGGAATCTTGC-TGTCAATTA  693
      ||||||||||||| |||||||||||||||| | || |||||||||
seq2  TGAACCCAGAGGT-ACAGTAACTGGGGAATTTGGCTTGTCAATTA  693