BAC Information

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BAC

Clone NameB6Ng01-018D08
Chromosome13 (Build37)
Map Location 14,642,136 - 14,643,306
singlet/doubletsinglet
Overlap genenone
Upstream geneLyst, LOC100039831, Gng4, EG665000, EG665008, LOC630894, LOC100040205, B3galnt2, Tbce, Ggps1, LOC100040243, Arid4b, LOC100039916, Hecw1
Downstream geneMrpl32, Psma2, AW209491, EG665099, LOC670994, EG625121, Gli3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-018D08.bB6Ng01-018D08.g
ACCDH851675DH851676
length1,159869
definitionDH851675|Mus musculus domesticus DNA, BAC clone: B6Ng01-018D08, 5' end.DH851676|Mus musculus domesticus DNA, BAC clone: B6Ng01-018D08, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctctcaagggaatgaatctgagatgattttgctagatgggaacat
gaagtacctgagaaggacattaaggataatcgttaagtacaactaattcc
tactcgatctcttaagacaaagtatccataatctcaccaacagggaaatt
tatggcaggattttaatggaactaaaactatggagatcatatggcactct
gaccatgatagaatggagtttgatgcaaagaatgagtaaagcaggtgaca
atttctttcagcaggttgttaggcaagaaaggaggagttccaatttttaa
aaactgagtaagagtccaattcttagagtgggcctaacttagctcttttt
cacagtccctgtcagccttcaccttgtaacttacctccagtactttatgt
ttgtgcctctggtctacaaaaatactttctaccaggaccgcagtggctcc
actgggctgggactcaatttttatatactttcagtcctcaattttactct
ccccagacttattcttagtcctgtagcatcttattgatagaagcccctcc
tttcatcctgtatccattctctgtgaactccaactcttgaggcaaacaca
gactctccctagctctttcatccctgtctctccagacatatttttgacct
acttcagcctcttttcaggagccccctttcttactttacctccattcctt
gtggagtttaactctttgtatgcaccctgatctcccctagctctttcctg
gggtccctcttagttcatctctattcatttctatcacccaccaaccagca
gatgcactctctaccatggatggatctcatacacaccatacttgcttagg
acccagagagggcaaaaaccaaagaatggaatacctcattaccactagca
gcaacaaagaaagatgggatattgacatcaaggaatatttcaagcatcat
aatttcagatacttagaaaagccataaacaacataaatagacaaagcaat
atgtctccatcagaagccaatttctctactagagtagaccctgaggaatt
caatgcagctgaagcataaaacaggatttcaaaatagctattatggatat
gttcataacttaaaaggaatatgataatcttaataaagtccagaaaccaa
caattgaat
cggaattattttcactatcctgcttttttatttttcatatgaaattgaga
attgctctttccatgtctgtgaagaactgtgttggagtcttgatggggat
tgcattgaacctgtagattgcttttggtaagatgaccattttcactatgt
taatcctaccaacatgagcatgagagatctttccatcttctaagttcttt
aattccttttttcagagatttgaagttcctgtcatacagatctttcactt
gcttggtaccccaagataatttatactatttgtggctatttgaagagtgt
tgtttccctattgtctttttcagcctgtttatcatttgtataaaggaagg
ctattgtttatcagctgtaggagctctctggtagaatttttggggtcgct
tatgtatgctaacatgtcatctgcaattagtgatatcttgacttcttgtt
ttctaatttgtattccattaatattcttttgatgtctaattgctttagct
agaattttgagtactatattggatagatacagaaagaatgggcagcctta
tcttgtccctaattttagtgggattgcttcaagtatctctccatttaatt
tgatattggctgatggtttgctttatattgattttattatgtttaggtag
gtgtactggctggttttgtgtgtcaacttgacacaagctggagatatcac
agagaaaggagtttcagttggggaagtgctttcatgagatccagatgtgg
agcattttctcaatttagtgatcaaggggtggggagggtcccttgtggat
ggtaccatctctgggctggtagtcttgggttctataagaaagcaagctta
acaagccaggggaagcaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_14642136_14643306
seq2: B6Ng01-018D08.b_45_1203

seq1  GAATTCTCTCAAGGGAATGAATCTGAGATGATTTTGCTAGATGGGAACAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTCAAGGGAATGAATCTGAGATGATTTTGCTAGATGGGAACAT  50

seq1  GAAGTACCTGAGAAGGACATTAAGGATAATCGTTAAGTACAACTAATTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTACCTGAGAAGGACATTAAGGATAATCGTTAAGTACAACTAATTCC  100

seq1  TACTCGATCTCTTAAGACAAAGTATCCATAATCTCACCAACAGGGAAATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCGATCTCTTAAGACAAAGTATCCATAATCTCACCAACAGGGAAATT  150

seq1  TATGGCAGGATTTTAATGGAACTAAAACTATGGAGATCATATGGCACTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGCAGGATTTTAATGGAACTAAAACTATGGAGATCATATGGCACTCT  200

seq1  GACCATGATAGAATGGAGTTTGATGCAAAGAATGAGTAAAGCAGGTGACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCATGATAGAATGGAGTTTGATGCAAAGAATGAGTAAAGCAGGTGACA  250

seq1  ATTTCTTTCAGCAGGTTGTTAGGCAAGAAAGGAGGAGTTCCAATTTTTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTTTCAGCAGGTTGTTAGGCAAGAAAGGAGGAGTTCCAATTTTTAA  300

seq1  AAACTGAGTAAGAGTCCAATTCTTAGAGTGGGCCTAACTTAGCTCTTTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGAGTAAGAGTCCAATTCTTAGAGTGGGCCTAACTTAGCTCTTTTT  350

seq1  CACAGTCCCTGTCAGCCTTCACCTTGTAACTTACCTCCAGTACTTTATGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGTCCCTGTCAGCCTTCACCTTGTAACTTACCTCCAGTACTTTATGT  400

seq1  TTGTGCCTCTGGTCTACAAAAATACTTTCTACCAGGACCGCAGTGGCTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGCCTCTGGTCTACAAAAATACTTTCTACCAGGACCGCAGTGGCTCC  450

seq1  ACTGGGCTGGGACTCAATTTTTATATACTTTCAGTCCTCAATTTTACTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGGCTGGGACTCAATTTTTATATACTTTCAGTCCTCAATTTTACTCT  500

seq1  CCCCAGACTTATTCTTAGTCCTGTAGCATCTTATTGATAGAAGCCCCTCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAGACTTATTCTTAGTCCTGTAGCATCTTATTGATAGAAGCCCCTCC  550

seq1  TTTCATCCTGTATCCATTCTCTGTGAACTCCAACTCTTGAGGCAAACACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATCCTGTATCCATTCTCTGTGAACTCCAACTCTTGAGGCAAACACA  600

seq1  GACTCTCCCTAGCTCTTTCATCCCTGTCTCTCCAGACATATTTTTGACCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCTCCCTAGCTCTTTCATCCCTGTCTCTCCAGACATATTTTTGACCT  650

seq1  ACTTCAGCCTCTTTTCAGGAGCCCCCTTTCTTACTTTACCTCCATTCCTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCAGCCTCTTTTCAGGAGCCCCCTTTCTTACTTTACCTCCATTCCTT  700

seq1  GTGGAGTTTAACTCTTTGTATGCACCCTGATCTCCCCTAGCTCTTTCCTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAGTTTAACTCTTTGTATGCACCCTGATCTCCCCTAGCTCTTTCCTG  750

seq1  GGGTCCCTCTTAGTTCATCTCTATTCATTTCTATCACCCACCAACCAGCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCCCTCTTAGTTCATCTCTATTCATTTCTATCACCCACCAACCAGCA  800

seq1  GATGCACTCTCTACCATGGATGGATCTCATACACACCATACTTGCTTAGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCACTCTCTACCATGGATGGATCTCATACACACCATACTTGCTTAGG  850

seq1  ACCCAGAGAGGGCAAAAACCAAAGAATGGAATACCTCATTACCACTAGCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAGAGAGGGCAAAAACCAAAGAATGGAATACCTCATTACCACTAGCA  900

seq1  GCAACAAAGAAAGATGGGATATTGACATCAAGGAATACTTCAAGCATCAT  950
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  GCAACAAAGAAAGATGGGATATTGACATCAAGGAATATTTCAAGCATCAT  950

seq1  AATTTCAGATACTTAGAAAAGCCATAAACAAACATAAATAGACAAAGCAA  1000
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  AATTTCAGATACTTAGAAAAGCCATAAAC-AACATAAATAGACAAAGCAA  999

seq1  TATGTCTCCATCAGAAGCCAATATCTCTACTAGAGTAGACCCTGAGAAAT  1050
      |||||||||||||||||||||| ||||||||||||||||||||||| |||
seq2  TATGTCTCCATCAGAAGCCAATTTCTCTACTAGAGTAGACCCTGAGGAAT  1049

seq1  TCAATGCAGCTGAAGCATAAAACAAGGATTTCAAAATAGCAATTATGGAT  1100
      ||||||||||||||||||||||| |||||||||||||||| |||||||||
seq2  TCAATGCAGCTGAAGCATAAAAC-AGGATTTCAAAATAGCTATTATGGAT  1098

seq1  ATGTTCATAAACCTTAAAATGAATATGAATAAATCCATTAATAAAGTCCA  1150
      ||||||||||  ||||||| ||||||||   ||||  |||||||||||||
seq2  ATGTTCATAA--CTTAAAAGGAATATGA--TAATC--TTAATAAAGTCCA  1142

seq1  TGAAAACACAAACAATTGAAT  1171
       |||   || |||||||||||
seq2  -GAA---ACCAACAATTGAAT  1159