BAC Information

Click to search

BAC

Clone NameB6Ng01-018H04
Chromosome13 (Build37)
Map Location 67,693,950 - 67,838,701
singlet/doubletdoublet
Overlap geneZfp87, A530054K11Rik, LOC328277, 3830402I07Rik, EG666137
Upstream geneMzf6d, Vmn2r-ps106, LOC666027, LOC100042492, LOC100041947, EG382769, LOC666052, EG432768, LOC666061, Uqcrb, Mterfd1, Ptdss1, Zfp712, Zfp708, Zfp759, Rsl1, LOC674699, Zfp455, Zfp458, Zfp457, A230042K10Rik, E130120F12Rik, Zfp456, 2810487A22Rik, Zfp459, C330011K17Rik, LOC666098, 9630025I21Rik, Zfp817, Zfp748
Downstream geneZfp85-rs1, LOC674597, Zfp273, BC048507, LOC666185, LOC100042687, LOC100042692, LOC674779, LOC677603, LOC100042124, LOC666222, AA414992, LOC666238, EG666245, EG666272, LOC100042223, Mtrr, LOC100042233, Fastkd3, 1700001L19Rik, Adcy2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-018H04.bB6Ng01-018H04.g
ACCDH851848DH851849
length1,0151,101
definitionDH851848|Mus musculus domesticus DNA, BAC clone: B6Ng01-018H04, 5' end.DH851849|Mus musculus domesticus DNA, BAC clone: B6Ng01-018H04, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(67,837,683 - 67,838,701)(67,693,950 - 67,695,151)
sequence
gaattcctttcatgggtctcctttaagagtaaatatgttgactgaagaag
taatggataaaacttctcagttaaattgccttatgttatttctgtggatg
agtgatcagtgtggggaaatgatgagtagcctttgttaatctttatagct
ttactcaacacaaaacagtccatactggagtcaggtcttaaggagttctt
aaaaagtatgtatttcttcagaccttaaaagacatcaattgattcattcc
gaatacaaattgcgtaagtgtgtggaatgtggtaagaacttgaccaatcc
ttcagatatatccaaagcaaatcgctctatagtacagacaattaagttaa
ttattttggaatgtcaacacaaacatctaatgtctagcatcaccaattcg
aaaaatgtcaccagagaacagtagagacttctctttgctgtaacctcccc
accaatgtccttaatcttgaatcttgcatggatggatgagtttctttctt
aactattaataggaaatgaagctgttgccatattgtaacttggcctttta
ggtgcccagattatgagatctgggctgtgatatgatgaccgtcattactt
cctagtcacccaatctcttgtcataacatttctcctagctgtgaaggaag
ctctgtaaactcatatctcacaccaagttggtagttggtgaaatgttcta
tattggttctaacctgggctgaattggcattagtgtttttctccccaaga
aaggctaacagaacatattgaagttatgtttgggttccagaataaagcat
ctcttatttcctttagtttcagaatggtatttctcatatgaatctttcat
attataccaacttggcagcatattgaaataaggaaccaagcctcatgcac
tcagacaacagaagggatgtgtttgtttagtggatatgtgatgtcaaccc
tgaaattttttaactgcagtgctgattttactattgatacaattctaaaa
cacctttaaactaaa
gaattctcctgtgtttagaaagtgatgacagagaacggaaagccttttca
catacttcacacttgtatggtttctctcctgtatgcatttttgcatgggt
agaaagtcttgagggataatcgaaagccttgccacatacttcacacttgt
aaggattctcttctgtatgaattatcttgtgcttagaaaggagtgataaa
atgcggaaggccttcccacatatttcacacttgtatggtttctctactga
atggattttcttatggttggaaagtcttgatggataatggaaggccttgc
cacatacctcacacttgtagggtttttctcctctatgaattattttgtgt
ttagaaagaaatgatgaaatgtggaaggccttgccacattcttcacactt
gtatggtttctctcctgtatgaattcgcttgtgtttagagagtattgatg
gataatgaaaggccttgccacatacttcacacttgtatggtttttctcct
gtatgaactctcttgtgtaccaaaagtaatgatggaaagtggaaggcttt
tccacatacttcacacttgtatggtttctcttctgaatgaatcttcttat
gtctggaaagtcttgatggatgttggaaggccttgccacacacttcacac
ttgtagagattctctcctttatgaattatcttgtgtttagaaagtaataa
tggaatgcagaaggccttgccacaaacttcacatttgtaaggtttttctc
ctgcatgaattgtgctctcttcagaacttaatgatggaatatggaaggac
ttggcacgttcttcactcctgtagggcttcacttctaagtcaattatctg
gtgattttgaaacacttttgaccactcaaaaacttttccatattctctgc
attctgtggagaaacgattgagaaattaataaagcagagtaaattctgta
aatttatatgtttctctttaaaaccaacattctcactggtctgtttactt
gcacttgtcttataaatgataagctacatcatttttaactgtatcaagga
ggcccagtaaaaaaagaagtggaaatcagagcctctcactgctagaaaac
c
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_67837683_67838701
seq2: B6Ng01-018H04.b_46_1060 (reverse)

seq1  TTTAGTTTTAAATGGTGTTTTAGAATCTGTATCAATAGTAAAAGTCAGCA  50
      ||||||||  || ||||||||||||| |||||||||||||||| ||||||
seq2  TTTAGTTT--AAAGGTGTTTTAGAAT-TGTATCAATAGTAAAA-TCAGCA  46

seq1  CTGCAGTTAAAATATTTCAGGGTTGACAATCACATATCCACTAAACAAAC  100
      |||||||||||| |||||||||||||| ||||||||||||||||||||||
seq2  CTGCAGTTAAAAAATTTCAGGGTTGAC-ATCACATATCCACTAAACAAAC  95

seq1  ACATCCCTTCTGTTGTCTGAGTGCATGAGGCTTGGTTCCTTATTTCAATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCCCTTCTGTTGTCTGAGTGCATGAGGCTTGGTTCCTTATTTCAATA  145

seq1  TGCTGCCAAGTTGGTATAATATGAAAGATTCATATGAGAAATACCATTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGCCAAGTTGGTATAATATGAAAGATTCATATGAGAAATACCATTCT  195

seq1  GAAACTAAAGGAAATAAGAGATGCTTTATTCTGGAA-CCAAACATAACTT  249
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  GAAACTAAAGGAAATAAGAGATGCTTTATTCTGGAACCCAAACATAACTT  245

seq1  CAATATGTTCTGTTAGCCTTTCTTGGGGAGAAAAACACTAATGCCAATTC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATATGTTCTGTTAGCCTTTCTTGGGGAGAAAAACACTAATGCCAATTC  295

seq1  AGCCCAGGTTAGAACCAATATAGAACATTTCACCAACTACCAACTTGGTG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCAGGTTAGAACCAATATAGAACATTTCACCAACTACCAACTTGGTG  345

seq1  TGAGATATGAGTTTACAGAGCTTCCTTCACAGCTAGGAGAAATGTTATGA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGATATGAGTTTACAGAGCTTCCTTCACAGCTAGGAGAAATGTTATGA  395

seq1  CAAGAGATTGGGTGACTAGGAAGTAATGACGGTCATCATATCACAGCCCA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAGATTGGGTGACTAGGAAGTAATGACGGTCATCATATCACAGCCCA  445

seq1  GATCTCATAATCTGGGCACCTAAAAGGCCAAGTTACAATATGGCAACAGC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTCATAATCTGGGCACCTAAAAGGCCAAGTTACAATATGGCAACAGC  495

seq1  TTCATTTCCTATTAATAGTTAAGAAAGAAACTCATCCATCCATGCAAGAT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTTCCTATTAATAGTTAAGAAAGAAACTCATCCATCCATGCAAGAT  545

seq1  TCAAGATTAAGGACATTGGTGGGGAGGTTACAGCAAAGAGAAGTCTCTAC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGATTAAGGACATTGGTGGGGAGGTTACAGCAAAGAGAAGTCTCTAC  595

seq1  TGTTCTCTGGTGACATTTTTCGAATTGGTGATGCTAGACATTAGATGTTT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTCTGGTGACATTTTTCGAATTGGTGATGCTAGACATTAGATGTTT  645

seq1  GTGTTGACATTCCAAAATAATTAACTTAATTGTCTGTACTATAGAGCGAT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTGACATTCCAAAATAATTAACTTAATTGTCTGTACTATAGAGCGAT  695

seq1  TTGCTTTGGATATATCTGAAGGATTGGTCAAGTTCTTACCACATTCCACA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTTTGGATATATCTGAAGGATTGGTCAAGTTCTTACCACATTCCACA  745

seq1  CACTTACGCAATTTGTATTCGGAATGAATCAATTGATGTCTTTTAAGGTC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTACGCAATTTGTATTCGGAATGAATCAATTGATGTCTTTTAAGGTC  795

seq1  TGAAGAAATACATACTTTTTAAGAACTCCTTAAGACCTGACTCCAGTATG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGAAATACATACTTTTTAAGAACTCCTTAAGACCTGACTCCAGTATG  845

seq1  GACTGTTTTGTGTTGAGTAAAGCTATAAAGATTAACAAAGGCTACTCATC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGTTTTGTGTTGAGTAAAGCTATAAAGATTAACAAAGGCTACTCATC  895

seq1  ATTTCCCCACACTGATCACTCATCCACAGAAATAACATAAGGCAATTTAA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCCCCACACTGATCACTCATCCACAGAAATAACATAAGGCAATTTAA  945

seq1  CTGAGAAGTTTTATCCATTACTTCTTCAGTCAACATATTTACTCTTAAAG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGAAGTTTTATCCATTACTTCTTCAGTCAACATATTTACTCTTAAAG  995

seq1  GAGACCCATGAAAGGAATTC  1019
      ||||||||||||||||||||
seq2  GAGACCCATGAAAGGAATTC  1015

seq1: chr13_67693950_67695151
seq2: B6Ng01-018H04.g_67_1167

seq1  GAATTCTCCTGTGTTTAGAAAGTGATGACAGAGAACGGAAAGCCTTTTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCTGTGTTTAGAAAGTGATGACAGAGAACGGAAAGCCTTTTCA  50

seq1  CATACTTCACACTTGTATGGTTTCTCTCCTGTATGCATTTTTGCATGGGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACTTCACACTTGTATGGTTTCTCTCCTGTATGCATTTTTGCATGGGT  100

seq1  AGAAAGTCTTGAGGGATAATCGAAAGCCTTGCCACATACTTCACACTTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGTCTTGAGGGATAATCGAAAGCCTTGCCACATACTTCACACTTGT  150

seq1  AAGGATTCTCTTCTGTATGAATTATCTTGTGCTTAGAAAGGAGTGATAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGATTCTCTTCTGTATGAATTATCTTGTGCTTAGAAAGGAGTGATAAA  200

seq1  ATGCGGAAGGCCTTCCCACATATTTCACACTTGTATGGTTTCTCTACTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCGGAAGGCCTTCCCACATATTTCACACTTGTATGGTTTCTCTACTGA  250

seq1  ATGGATTTTCTTATGGTTGGAAAGTCTTGATGGATAATGGAAGGCCTTGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGATTTTCTTATGGTTGGAAAGTCTTGATGGATAATGGAAGGCCTTGC  300

seq1  CACATACCTCACACTTGTAGGGTTTTTCTCCTCTATGAATTATTTTGTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATACCTCACACTTGTAGGGTTTTTCTCCTCTATGAATTATTTTGTGT  350

seq1  TTAGAAAGAAATGATGAAATGTGGAAGGCCTTGCCACATTCTTCACACTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAAAGAAATGATGAAATGTGGAAGGCCTTGCCACATTCTTCACACTT  400

seq1  GTATGGTTTCTCTCCTGTATGAATTCGCTTGTGTTTAGAGAGTATTGATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGGTTTCTCTCCTGTATGAATTCGCTTGTGTTTAGAGAGTATTGATG  450

seq1  GATAATGAAAGGCCTTGCCACATACTTCACACTTGTATGGTTTTTCTCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAATGAAAGGCCTTGCCACATACTTCACACTTGTATGGTTTTTCTCCT  500

seq1  GTATGAACTCTCTTGTGTACCAAAAGTAATGATGGAAAGTGGAAGGCTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGAACTCTCTTGTGTACCAAAAGTAATGATGGAAAGTGGAAGGCTTT  550

seq1  TCCACATACTTCACACTTGTATGGTTTCTCTTCTGAATGAATCTTCTTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACATACTTCACACTTGTATGGTTTCTCTTCTGAATGAATCTTCTTAT  600

seq1  GTCTGGAAAGTCTTGATGGATGTTGGAAGGCCTTGCCACACACTTCACAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGGAAAGTCTTGATGGATGTTGGAAGGCCTTGCCACACACTTCACAC  650

seq1  TTGTAGAGATTCTCTCCTTTATGAATTATCTTGTGTTTAGAAAGTAATAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAGAGATTCTCTCCTTTATGAATTATCTTGTGTTTAGAAAGTAATAA  700

seq1  TGGAATGCAGAAGGCCTTGCCACAAACTTCACATTTGTAAGGTTTTTCTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAATGCAGAAGGCCTTGCCACAAACTTCACATTTGTAAGGTTTTTCTC  750

seq1  CTGCATGAATTGTGCTCTCTTCAGAACTTAATGATGGAATATGGAAGGAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCATGAATTGTGCTCTCTTCAGAACTTAATGATGGAATATGGAAGGAC  800

seq1  TTGGCACGTTCTTCACTCCTGTAGGGCTTCACTTCTAAGTCAATTATCTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCACGTTCTTCACTCCTGTAGGGCTTCACTTCTAAGTCAATTATCTG  850

seq1  GTGATTTTGAAACACTTTGGACCACTCAAAAACTTTTCCATATTCTCTGC  900
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  GTGATTTTGAAACACTTTTGACCACTCAAAAACTTTTCCATATTCTCTGC  900

seq1  ATTCTGTGGAGAAACGATTGAGAAATTAATAAAAGCAGAGTAAAATTCTG  950
      |||||||||||||||||||||||||||||| |||||||||| ||||||||
seq2  ATTCTGTGGAGAAACGATTGAGAAATTAAT-AAAGCAGAGT-AAATTCTG  948

seq1  TAAATTTATAATGTTTCTCTTTAAAAACCAACATTTCTCACTTGTCTTGT  1000
      ||||||||| |||||||||||| |||||||||| |||||||| ||| |||
seq2  TAAATTTAT-ATGTTTCTCTTT-AAAACCAACA-TTCTCACTGGTC-TGT  994

seq1  CTTACTTGCACTTGTCTTTATAAATGATAAGCTACATTCATTTTTTTACA  1050
       ||||||||||||||| ||||||||||||||||||| ||||||||    |
seq2  -TTACTTGCACTTGTC-TTATAAATGATAAGCTACA-TCATTTTT----A  1037

seq1  CCTGTATTCAATGAAGCCTAATTTAAAACAGAAGTGGAAATCAAGTAGCC  1100
       ||||| |||| || |||  | | |||| ||||||||||||||   ||||
seq2  ACTGTA-TCAAGGAGGCC-CAGTAAAAAAAGAAGTGGAAATCA--GAGCC  1083

seq1  TCCCACTGACAAAAGAAGACCATGACAACACAGAAATGGAAACAAGGGAA  1150
      || |||||     |||| |||                             
seq2  TCTCACTG---CTAGAAAACC-----------------------------  1101

seq1  TGTTAATCAAAGTCAAATATGAAACAAAAACATAAAATTAACAAAGAAAA  1200
                                                        
seq2  --------------------------------------------------  1101

seq1  CC  1202
        
seq2  --  1101