BAC Information

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BAC

Clone NameB6Ng01-018P10
Chromosome13 (Build37)
Map Location 64,892,433 - 64,893,169
singlet/doubletsinglet
Overlap geneCntnap3
Upstream geneC030010C08Rik, 0610007P08Rik, 9330134C04Rik, EG665575, Hsd17b3, Slc35d2, Zfp367, Habp4, Cdc14b, 1110018J18Rik, Ctsl, Ccrk, LOC665612, 1190003K10Rik, LOC218298, Ppia-ps13_866.1, LOC238678, LOC631470
Downstream geneEG432767, 4930458L03Rik, LOC218301, LOC628515, 4932441B19Rik, Gm274, Hiatl1, LOC100042311, Olfr465-ps1, Olfr466, Nlrp4f, ENSMUSG00000074847, Zfp369, LOC100042347, LOC100042341, LOC665738, EG665742, LOC665750, LOC665753, EG544944, EG665767, LOC665777, EG628648, LOC665809, LOC100042404, LOC628722
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-018P10.bB6Ng01-018P10.g
ACCDH852210DH852211
length1,088738
definitionDH852210|Mus musculus domesticus DNA, BAC clone: B6Ng01-018P10, 5' end.DH852211|Mus musculus domesticus DNA, BAC clone: B6Ng01-018P10, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttaagctctctaccccatttcttaatggggctaattgaat
ttctggagtccagtttcttgagctctttgtatatattggatattagtccc
ttatcagatttaggattggtaaaaatcctttcccaatctgttggtggcct
ttttgtcttattgaaagtgtcttttgccttacagaagctttgcagttttt
tgaggtgccgtttgtcaattctcgatcttacaacacaagccattgctgtt
ctgtttaggaatttttcccctgtgcccatatgttcgaggctttccccact
ttctcctctataaatttcctgtctctggttttatgtggagttctttgatc
cacttagacttgagctttgtacaaggagataagaatggatcaatttgcat
tcttctacatgataaccgccagttgtgcctgtaccatttgttgaaaatgc
tcttttttccactggatggtttttagctcctttgtcaaagatcaagtgac
cataggtgtgtggattcatttctgggtcttcaattctattccattgacct
tcttgtctgtccatgtaccagtaccatgcagtttttatcacaattgctct
gtagtacagcttgaggtcaagcatggtgattccaccagaggttcttttat
tgttgagaatagtttttgatatcctagattttttttgttattccagatga
ttttgcaaattgccctgtccaactctgtgaagaaataagttggaattttg
atgggaattgcattgaatctgtagattgctttcagcaggatagccatttt
gactatattaatcctgccaatccatgagcatgggagatctttccatcttt
ctgtgatcttcattttctttcttcagagacttgaagttcttatcatacag
atctttcattccttaattagagtcacgccaaggtattttatattatttgt
gactattgtgaagggcattgtttccctatttatttctcagcccatttatt
ccttttgttagagaaaggccattgattggttgagtaattttatcccagct
acttccctgaaacctgttatccaggtaggagttctcta
gaattctattgcctgtaatgaaacaccatgaccagaaggtttatttggct
tgcacttcagtatcactgttcatcgtcaaaggaagtcagttaggaacctg
gaggcagaagctgatgtagaggccataggtgggtcctgtatattggcttg
ctgtggcttacttagtctgatttcttatagaatccagaactaccagccca
agggtggccccacacacaatggtctgggctcttacacaacaatcactaat
taagaaaatgccctacacagttgtctgcagcccaatcttatggaggcatt
ttctcaactgaggctcccttctctcagatgaatctacttgttgacataaa
aggagacaatacagagagactgattctttttagggctttgtctaatgcaa
tgctttagaaaaatcagttcctatttttaaacatctgccatgtaatataa
caattttattgtgtggaaaattagaaagtggggatggacatatttctcag
tagttaatatcacatactactattgcagaagacccaagctttgtctccag
cacccatgttggatggcctacagccagctacctgtaacttcaacaccaaa
ggattaatgcctcttacctccacagacacacctcttctcatatatatata
tgtgtgtgtgtgtgtatacatacatatatatgtatgtgtatatatatata
tatatacatatatatgtatatatatatatatatacaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_64892433_64893169
seq2: B6Ng01-018P10.g_67_804 (reverse)

seq1  TGTGT-TATATATATATATATACATATATATGTATATATATATATATATA  49
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTATATATATATATATATACATATATATGTATATATATATATATATA  50

seq1  CACATACATATATATGTATGTATACACACACACACACATATATATATATG  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATACATATATATGTATGTATACACACACACACACATATATATATATG  100

seq1  AGAAGAGGTGTGTCTGTGGAGGTAAGAGGCATTAATCCTTTGGTGTTGAA  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGAGGTGTGTCTGTGGAGGTAAGAGGCATTAATCCTTTGGTGTTGAA  150

seq1  GTTACAGGTAGCTGGCTGTAGGCCATCCAACATGGGTGCTGGAGACAAAG  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACAGGTAGCTGGCTGTAGGCCATCCAACATGGGTGCTGGAGACAAAG  200

seq1  CTTGGGTCTTCTGCAATAGTAGTATGTGATATTAACTACTGAGAAATATG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGGTCTTCTGCAATAGTAGTATGTGATATTAACTACTGAGAAATATG  250

seq1  TCCATCCCCACTTTCTAATTTTCCACACAATAAAATTGTTATATTACATG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATCCCCACTTTCTAATTTTCCACACAATAAAATTGTTATATTACATG  300

seq1  GCAGATGTTTAAAAATAGGAACTGATTTTTCTAAAGCATTGCATTAGACA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGATGTTTAAAAATAGGAACTGATTTTTCTAAAGCATTGCATTAGACA  350

seq1  AAGCCCTAAAAAGAATCAGTCTCTCTGTATTGTCTCCTTTTATGTCAACA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCCTAAAAAGAATCAGTCTCTCTGTATTGTCTCCTTTTATGTCAACA  400

seq1  AGTAGATTCATCTGAGAGAAGGGAGCCTCAGTTGAGAAAATGCCTCCATA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGATTCATCTGAGAGAAGGGAGCCTCAGTTGAGAAAATGCCTCCATA  450

seq1  AGATTGGGCTGCAGACAACTGTGTAGGGCATTTTCTTAATTAGTGATTGT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTGGGCTGCAGACAACTGTGTAGGGCATTTTCTTAATTAGTGATTGT  500

seq1  TGTGTAAGAGCCCAGACCATTGTGTGTGGGGCCACCCTTGGGCTGGTAGT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTAAGAGCCCAGACCATTGTGTGTGGGGCCACCCTTGGGCTGGTAGT  550

seq1  TCTGGATTCTATAAGAAATCAGACTAAGTAAGCCACAGCAAGCCAATATA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGATTCTATAAGAAATCAGACTAAGTAAGCCACAGCAAGCCAATATA  600

seq1  CAGGACCCACCTATGGCCTCTACATCAGCTTCTGCCTCCAGGTTCCTAAC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGACCCACCTATGGCCTCTACATCAGCTTCTGCCTCCAGGTTCCTAAC  650

seq1  TGACTTCCTTTGACGATGAACAGTGATACTGAAGTGCAAGCCAAATAAAC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTTCCTTTGACGATGAACAGTGATACTGAAGTGCAAGCCAAATAAAC  700

seq1  CTTCTGGTCATGGTGTTTCATTACAGGCAATAGAATTC  737
      ||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGGTCATGGTGTTTCATTACAGGCAATAGAATTC  738