BAC Information

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BAC

Clone NameB6Ng01-021B03
Chromosome13 (Build37)
Map Location 26,845,887 - 26,846,469
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC666221, LOC100042180, LOC100042191
Downstream geneHdgfl1, LOC100040939, LOC100040945, LOC100040957, Prl, Prl3d1, Prl3d2, Prl3d3, Prl3c1, Prl3b1, Prl3a1, Prl6a1, Prl8a2, Prl2b1, Prl8a6, Prl8a8, Prl8a9, Prl8a1, Prl7b1, Prl7a1, Prl7a2, RP23-135A24.2-001, Prl7d1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-021B03.bB6Ng01-021B03.g
ACCDH853681DH853682
length1,237583
definitionDH853681|Mus musculus domesticus DNA, BAC clone: B6Ng01-021B03, 5' end.DH853682|Mus musculus domesticus DNA, BAC clone: B6Ng01-021B03, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccagtttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtgatct
ttttgtcttattgatggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttaagtgaagttccttga
tctacttagatttgatcttagtacaaggagtatggatcgattcccattct
tctacatgataacaaccagttgtgccagcaccaattgttgaaaatgctgt
ctttcttccactggatggttttagctcccttgtcgaagatcaagtgacca
taggtgtgtggcttcatttctgggtcttcaattctattccattggtctac
ttgtctgtctctataccagtaccatgcagtttttatcacaattgctctgt
agtaaagctttaggtcagatatggtgattccaccagaggttcttttatcc
ttgagaagagtttttgctattctaggttttttgttattccagatgaatct
gccgattgccctttctaattcgttgaagaattgagttggaattttgatgg
ggattgcattgaatctgtagattgcttttggcaagatatccatttttaca
atgttaatcctgccaatccatgagcatggttgatccttcatcttctgaga
tcttctttaatttcttttcttcagagacttgaagttttatcatacagatc
tttcacttccttagttagagtcacgctgagatacttatatatttgtgact
attgagaaggtgttgtttcctaattctttctcagctgttattctttgttt
gaggaaggtcattgactgtttgagttttttatattcccgctacttcaccg
agctgttatcagggttaggagtctcctggtgatttttggggtacttaata
tactatcatatcatctggcaagggaatttgacctctctctttccaattga
ttcccctggatctctttgtgaagtgtgcaatgactctggctaactcgaag
cactaggttaagttgaggttattgggtcacccgtgca
gaattcctaagtgctgcttccctgttggctgacattgcatttatgtttta
agatcagaactttgaataacactataatttcccaggaatgagagacccac
aagtgttgcacggctagctctatatgcaaccctagagcagcctctatcac
tgtctgttgagtcatatttataccctccaaatatcacaggtccttcactg
acatcactctgccaaccagcccaagtctgcagaagcaacaaaaaactgca
gcacaccaccataagttttttgatgtgtttctttctgtggagttctgaac
aatgaagctcaactatgcaatgtaaggcagaacaatgcctgttgttagca
acgaatcctccattacatgtcctttcatttgatagctttagcaaaacatc
ctttcacttgcatctgcttcagctaaatttcccttcacgtgtttgcccca
gcaagatccaccaactttccgaagaaccctcaagtttccacttcactgtt
ataaatgcgtgaagacttagtagacataattcactgtggattttctgtaa
tattaatgacatagggagggggagagggaggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_26845887_26846469
seq2: B6Ng01-021B03.g_68_650 (reverse)

seq1  TCCCTCCCTCTCCCCCTCCCTATGTCATTAATATTACAGAAAATCCACAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTCCCTCTCCCCCTCCCTATGTCATTAATATTACAGAAAATCCACAG  50

seq1  TGAATTATGTCTACTAAGTCTTCACGCATTTATAACAGTGAAGTGGAAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATTATGTCTACTAAGTCTTCACGCATTTATAACAGTGAAGTGGAAAC  100

seq1  TTGAGGGTTCTTCGGAAAGTTGGTGGATCTTGCTGGGGCAAACACGTGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGGGTTCTTCGGAAAGTTGGTGGATCTTGCTGGGGCAAACACGTGAA  150

seq1  GGGAAATTTAGCTGAAGCAGATGCAAGTGAAAGGATGTTTTGCTAAAGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAATTTAGCTGAAGCAGATGCAAGTGAAAGGATGTTTTGCTAAAGCT  200

seq1  ATCAAATGAAAGGACATGTAATGGAGGATTCGTTGCTAACAACAGGCATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAATGAAAGGACATGTAATGGAGGATTCGTTGCTAACAACAGGCATT  250

seq1  GTTCTGCCTTACATTGCATAGTTGAGCTTCATTGTTCAGAACTCCACAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTGCCTTACATTGCATAGTTGAGCTTCATTGTTCAGAACTCCACAGA  300

seq1  AAGAAACACATCAAAAAACTTATGGTGGTGTGCTGCAGTTTTTTGTTGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAACACATCAAAAAACTTATGGTGGTGTGCTGCAGTTTTTTGTTGCT  350

seq1  TCTGCAGACTTGGGCTGGTTGGCAGAGTGATGTCAGTGAAGGACCTGTGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCAGACTTGGGCTGGTTGGCAGAGTGATGTCAGTGAAGGACCTGTGA  400

seq1  TATTTGGAGGGTATAAATATGACTCAACAGACAGTGATAGAGGCTGCTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTGGAGGGTATAAATATGACTCAACAGACAGTGATAGAGGCTGCTCT  450

seq1  AGGGTTGCATATAGAGCTAGCCGTGCAACACTTGTGGGTCTCTCATTCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTTGCATATAGAGCTAGCCGTGCAACACTTGTGGGTCTCTCATTCCT  500

seq1  GGGAAATTATAGTGTTATTCAAAGTTCTGATCTTAAAACATAAATGCAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAATTATAGTGTTATTCAAAGTTCTGATCTTAAAACATAAATGCAAT  550

seq1  GTCAGCCAACAGGGAAGCAGCACTTAGGAATTC  583
      |||||||||||||||||||||||||||||||||
seq2  GTCAGCCAACAGGGAAGCAGCACTTAGGAATTC  583