BAC Information

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BAC

Clone NameB6Ng01-024F14
Chromosome13 (Build37)
Map Location 47,819,638 - 47,820,689
singlet/doubletsinglet
Overlap genenone
Upstream geneNup153, Kif13a, LOC544928, Nhlrc1, Tpmt, Aof1, Dek, LOC100039761, Ibrdc2
Downstream gene4931429P17Rik, Id4, LOC667351, Zfp169, A830005F24Rik, AW456874, Barx1
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-024F14.g
ACCDH856010
length1,048
definitionDH856010|Mus musculus domesticus DNA, BAC clone: B6Ng01-024F14, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttagagtgtaagaatggtgaatttagtttttgatatttatgat
aactttcaaataccacaggggtataaattatgagaaggaaaatatgagga
gtttggaggcaatttatgatgtagtaataatcttggcaaaaatacatcga
ttggagtatttacaaaaaatacaagtaatgtatgcaaaggtatttgccaa
gatggaatgaagaaacaggagagattacattccatggtgagtccaagtta
tgacttgggttattaggagaatagacgatttttggaagaagagcaaaaat
caagccaaggatgtgttttggagagcagggtgattatgtcgatttgtggc
attgggaggctaaggtactgaggctgcacatggcatgaaaagttggcaga
aagaaatacaagtctgaggtttcaaaaggcaaacatgaggaatttataac
ttaaccttatgaaagtgattcgtgaactacagagtgagctacgggttgaa
atatgctgtgtctattgatgctctaaacccctagtgtgtgtagtggcatc
tagagagggaacaatgggagggaactaggttttagatgagttttacatgg
tacactagaagaccaaattgaaactcactctcaaatctgacatgtgaagt
ggttgtttcggtgtggtacctacatgcattaagagagtggtagatatatg
ccttgagattctagaatggacaatatgatttccaatggggagatgctcaa
gaatctttcttgatgtaactagtataacttggattgtgcccaaaattctc
cacattcctcatgttttttgtaatgcaatttccatgcaaaagagtgcttc
aaggacaggtatagatgagagtgattgacactggactttgaatgtcttgt
aagaaacttgttttatggagctataggaacaacattagaggacaatttat
agtggttgaccgagttaaggcaaatgatagagaacctgagtatccaggaa
tagtatattgtgcaaatttctactggtagaattccttaagactcaagg
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_47819638_47820689
seq2: B6Ng01-024F14.g_68_1115 (reverse)

seq1  CCTTGAGTCTTAAGGAACTTCTTACCAGTATGAAATTTGCTACATAATAC  50
      ||||||||||||||||| ||| |||||||| ||||||||| |||  ||||
seq2  CCTTGAGTCTTAAGGAA-TTC-TACCAGTA-GAAATTTGC-ACAATATAC  46

seq1  TTGTTCCTGGGCTTCTCAGTGTCTCTTTTCTTTGACCTTAACTCTGTCAA  100
       | ||||| || | |||||  ||||| |  |||| ||||||||| |||||
seq2  -TATTCCT-GGATACTCAGGTTCTCTATCATTTG-CCTTAACTCGGTCAA  93

seq1  TCACTATAAATGGTCCTTCTATGGTTGTTCTTATAGCTCCATAAAACAGG  150
       |||||||||| |||| ||||  ||||||| ||||||||||||||||| |
seq2  CCACTATAAATTGTCC-TCTAATGTTGTTCCTATAGCTCCATAAAACAAG  142

seq1  TTTCCTACAAGAACATTCAAAGT-CAGTGTCAATCACTC-CATCTATACC  198
      |||| |||||| ||||||||||| ||||||||||||||| ||||||||||
seq2  TTTCTTACAAG-ACATTCAAAGTCCAGTGTCAATCACTCTCATCTATACC  191

seq1  TGTCCTTGAAGCACTC-TTTGCATGGAAAATTGCATTAC-AAAAACATGA  246
      |||||||||||||||| ||||||||| |||||||||||| ||||||||||
seq2  TGTCCTTGAAGCACTCTTTTGCATGG-AAATTGCATTACAAAAAACATGA  240

seq1  GGAATGTGGAGAATTTTGGGCACAATCCAAGTGATACTAGTTACATCAAG  296
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  GGAATGTGGAGAATTTTGGGCACAATCCAAGTTATACTAGTTACATCAAG  290

seq1  AAAGATTCTTGAGCATCTCCCCATTGGAAATCATATTGTCCATTCTAGAA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATTCTTGAGCATCTCCCCATTGGAAATCATATTGTCCATTCTAGAA  340

seq1  TCTCAAGGCATATATCTACCACTCTCTTAATGCATGTAGGTACCACACCG  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAAGGCATATATCTACCACTCTCTTAATGCATGTAGGTACCACACCG  390

seq1  AAACAACCACTTCACATGTCAGATTTGAGAGTGAGTTTCAATTTGGTCTT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAACCACTTCACATGTCAGATTTGAGAGTGAGTTTCAATTTGGTCTT  440

seq1  CTAGTGTACCATGT-AAACTCATCT-AAACCTAGTTCCCTCCCATTGTTC  494
      |||||||||||||| |||||||||| ||||||||||||||||||||||||
seq2  CTAGTGTACCATGTAAAACTCATCTAAAACCTAGTTCCCTCCCATTGTTC  490

seq1  CCTCTCTAGATGCCACTACACACACTAGGGGTTTAGAGCATCAATAGACA  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTCTAGATGCCACTACACACACTAGGGGTTTAGAGCATCAATAGACA  540

seq1  CAGCATATTTCAACCCGTAGCTCACTCTGTAGTTCACGAATCACTTTCAT  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCATATTTCAACCCGTAGCTCACTCTGTAGTTCACGAATCACTTTCAT  590

seq1  AAGGTTAAGTTATAAATTCCTCATGTTTGCCTTTTGAAACCTCAGACTTG  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTTAAGTTATAAATTCCTCATGTTTGCCTTTTGAAACCTCAGACTTG  640

seq1  TATTTCTTTCTGCCAACTTTTCATGCCATGTGCAGCCTCAGTACCTTAGC  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCTTTCTGCCAACTTTTCATGCCATGTGCAGCCTCAGTACCTTAGC  690

seq1  CTCCCAATGCCACAAATCGACATAATCACCCTGCTCTCCAAAACACATCC  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCAATGCCACAAATCGACATAATCACCCTGCTCTCCAAAACACATCC  740

seq1  TTGGCTTGATTTTTGCTCTTCTTCCAAAAATCGTCTATTCTCCTAATAAC  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCTTGATTTTTGCTCTTCTTCCAAAAATCGTCTATTCTCCTAATAAC  790

seq1  CCAAGTCATAACTTGGACTCACCATGGAATGTAATCTCTCCTGTTTCTTC  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGTCATAACTTGGACTCACCATGGAATGTAATCTCTCCTGTTTCTTC  840

seq1  ATTCCATCTTGGCAAATACCTTTGCATACATTACTTGTATTTTTTGTAAA  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCATCTTGGCAAATACCTTTGCATACATTACTTGTATTTTTTGTAAA  890

seq1  TACTCCAATCGATGTATTTTTGCCAAGATTATTACTACATCATAAATTGC  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCCAATCGATGTATTTTTGCCAAGATTATTACTACATCATAAATTGC  940

seq1  CTCCAAACTCCTCATATTTTCCTTCTCATAATTTATACCCCTGTGGTATT  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAAACTCCTCATATTTTCCTTCTCATAATTTATACCCCTGTGGTATT  990

seq1  TGAAAGTTATCATAAATATCAAAAACTAAATTCACCATTCTTACACTCTA  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAGTTATCATAAATATCAAAAACTAAATTCACCATTCTTACACTCTA  1040

seq1  AAGAATTC  1052
      ||||||||
seq2  AAGAATTC  1048