BAC Information

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BAC

Clone NameB6Ng01-024N19
Chromosome13 (Build37)
Map Location 26,392,192 - 26,393,149
singlet/doubletsinglet
Overlap genenone
Upstream geneTpi-rs8, LOC214973, LOC666221
Downstream geneLOC100042180, LOC100042191, Hdgfl1, LOC100040939, LOC100040945, LOC100040957, Prl, Prl3d1, Prl3d2, Prl3d3, Prl3c1, Prl3b1, Prl3a1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-024N19.bB6Ng01-024N19.g
ACCDH856373DH856374
length838950
definitionDH856373|Mus musculus domesticus DNA, BAC clone: B6Ng01-024N19, 5' end.DH856374|Mus musculus domesticus DNA, BAC clone: B6Ng01-024N19, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcacatcatagaaatctgaaatggctgatgagcacttaaagaaatg
ttcaaagtccttagtcatcagggaaatgcaaatcaaaatgaccctaagat
tccaccatgcatcaattagaatggctaagatcaaaaattcaggtgacagc
acatgttggggaggatgtggagaaaggaacactcctccattgctagtgga
attgcaaactggcaaacccctgggaaatcaatctggaagtccctcagaaa
attggaagtagatttctacctgaagacccaggtatactactcttaggcat
atacccaaaagatgccccaccataccacaaaggcaagagctccactattc
atagcagccttattcatgatagccagaagctggaaacatgaagaatggat
acagaaaacgtggctcattgacatgatgcaatattattcacatattaaga
acaagaacatcatgagttctgcaggcaaatggttggaactagaaaatata
atcctgaatgacatacttcagactcaaatggacatgcatgatatgtactc
acaaataagtggatattagccaaacaagtacagaatacctaggatacaat
ctgtagaacgtaagaaggataacaagccgaagtgcccaaatgaggatgct
tcaatctcagttggaagggagatgaaaacagtcacaggaggtagacagag
gcaggtacctcagtgggagtgaggaggggaagggaaaagggaaacatgat
catgtatgggagtagagacagggccaatagaatgaatggaatattcaacc
tcaggagtgggaagttggggttcccagaaatcgaaaag

gaattctaagagtcatgcttttactgtttaaaatgataaaaacaaaacaa
ggacaaacaaaaaaaccccaaaacttatcagtcaaaataagacctgaatc
tgaaaaactagagagaaacatataggaacaaatgatacaaaacccacaga
attaggcatccatctatctagttagtcttgtggagatacagaactgcaaa
tgcatagcagcatccagcttggctctatttagccagaaagtgcccatgaa
gccagtttgcattttaacaaagtcttcttttctgaatcttttctatcctg
agttaagtggttggtttcttttatatgtggatcatgtaaatctaaatatc
tccttcatattataaacttcctagattaaaaaatatatttcaattgatat
atgacattgtaccattatttataaagtgtaatattataattaagtgcttg
gatatattaaatagtgatcatgccagggtaattaccatttctatctcctc
aatgtcaacactttcatttcttaaaattttaagactttttcagtagttat
tttataacaggtaatcaattttgcagacttcagttaccccaatgttccac
agaatgataaatatccttccctttatggagttgtactatggtgcccaagg
ctgattcaatgcatcatgtctcccacttcatcaggtgagctttttttcta
tcatctactgcaggatctatgccagacaattctagagatgagtggagaca
ggcagcagttgtcttcccagattcagcatcttctatttccacccaaatgt
gttgttacatgattgcatctgtttttacttacggctgaatgatgacacac
caaaaggacagaattctatccacttgttttgcttccatagtctgtgcttt
gaggacctttttgctgtgtgtattttggtttgtttgtttttggttttttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_26392192_26393149
seq2: B6Ng01-024N19.g_70_1019 (reverse)

seq1  AAAAAAACCAAAAAACAAAACAAAACCAAAAACAACAACAACAGCAAAAA  50
      ||||||||||||||   ||||||| | ||| |||      ||||| ||||
seq2  AAAAAAACCAAAAA--CAAACAAACCAAAATACA-----CACAGC-AAAA  42

seq1  AGGTCCTCAAAGCACAGACTATGGAAGCAAAACAAGTGGATAGAATTCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCCTCAAAGCACAGACTATGGAAGCAAAACAAGTGGATAGAATTCTG  92

seq1  TCCTTTTGGTGTGTCATCATTCAGCCGTAAGTAAAAACAGATGCAATCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTTGGTGTGTCATCATTCAGCCGTAAGTAAAAACAGATGCAATCAT  142

seq1  GTAACAACACATTTGGGTGGAAATAGAAGATGCTGAATCTGGGAAGACAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACAACACATTTGGGTGGAAATAGAAGATGCTGAATCTGGGAAGACAA  192

seq1  CTGCTGCCTGTCTCCACTCATCTCTAGAATTGTCTGGCATAGATCCTGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTGCCTGTCTCCACTCATCTCTAGAATTGTCTGGCATAGATCCTGCA  242

seq1  GTAGATGATAGAAAAAAAGCTCACCTGATGAAGTGGGAGACATGATGCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGATGATAGAAAAAAAGCTCACCTGATGAAGTGGGAGACATGATGCAT  292

seq1  TGAATCAGCCTTGGGCACCATAGTACAACTCCATAAAGGGAAGGATATTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATCAGCCTTGGGCACCATAGTACAACTCCATAAAGGGAAGGATATTT  342

seq1  ATCATTCTGTGGAACATTGGGGTAACTGAAGTCTGCAAAATTGATTACCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATTCTGTGGAACATTGGGGTAACTGAAGTCTGCAAAATTGATTACCT  392

seq1  GTTATAAAATAACTACTGAAAAAGTCTTAAAATTTTAAGAAATGAAAGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATAAAATAACTACTGAAAAAGTCTTAAAATTTTAAGAAATGAAAGTG  442

seq1  TTGACATTGAGGAGATAGAAATGGTAATTACCCTGGCATGATCACTATTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACATTGAGGAGATAGAAATGGTAATTACCCTGGCATGATCACTATTT  492

seq1  AATATATCCAAGCACTTAATTATAATATTACACTTTATAAATAATGGTAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATATCCAAGCACTTAATTATAATATTACACTTTATAAATAATGGTAC  542

seq1  AATGTCATATATCAATTGAAATATATTTTTTAATCTAGGAAGTTTATAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTCATATATCAATTGAAATATATTTTTTAATCTAGGAAGTTTATAAT  592

seq1  ATGAAGGAGATATTTAGATTTACATGATCCACATATAAAAGAAACCAACC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAGGAGATATTTAGATTTACATGATCCACATATAAAAGAAACCAACC  642

seq1  ACTTAACTCAGGATAGAAAAGATTCAGAAAAGAAGACTTTGTTAAAATGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAACTCAGGATAGAAAAGATTCAGAAAAGAAGACTTTGTTAAAATGC  692

seq1  AAACTGGCTTCATGGGCACTTTCTGGCTAAATAGAGCCAAGCTGGATGCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGGCTTCATGGGCACTTTCTGGCTAAATAGAGCCAAGCTGGATGCT  742

seq1  GCTATGCATTTGCAGTTCTGTATCTCCACAAGACTAACTAGATAGATGGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATGCATTTGCAGTTCTGTATCTCCACAAGACTAACTAGATAGATGGA  792

seq1  TGCCTAATTCTGTGGGTTTTGTATCATTTGTTCCTATATGTTTCTCTCTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTAATTCTGTGGGTTTTGTATCATTTGTTCCTATATGTTTCTCTCTA  842

seq1  GTTTTTCAGATTCAGGTCTTATTTTGACTGATAAGTTTTGGGGTTTTTTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTCAGATTCAGGTCTTATTTTGACTGATAAGTTTTGGGGTTTTTTT  892

seq1  GTTTGTCCTTGTTTTGTTTTTATCATTTTAAACAGTAAAAGCATGACTCT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGTCCTTGTTTTGTTTTTATCATTTTAAACAGTAAAAGCATGACTCT  942

seq1  TAGAATTC  958
      ||||||||
seq2  TAGAATTC  950


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