BAC Information

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BAC

Clone NameB6Ng01-025M08
Chromosome13 (Build37)
Map Location 119,738,094 - 119,739,138
singlet/doubletsinglet
Overlap genenone
Upstream geneHcn1, LOC100041695, LOC674926, Mrps30, LOC668309, LOC100041278, Fgf10
Downstream geneLOC100041298, LOC100041757, Nnt, Paip1, LOC100041802, 4833420G17Rik, 3110070M22Rik, EG633640
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-025M08.bB6Ng01-025M08.g
ACCDH857007DH857008
length1,034786
definitionDH857007|Mus musculus domesticus DNA, BAC clone: B6Ng01-025M08, 5' end.DH857008|Mus musculus domesticus DNA, BAC clone: B6Ng01-025M08, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcctctcattctcaattattagttatttcaatttgaagactgta
aatccagaagtgatgtccacaaagcaataacaaaaaaataaaataaaata
ataaaataaaataaaatggagcatgacgtgtgaaataaaaattttaagat
atatgctgtcttagctggaaaactcataaacgaatgggtttgctttttca
gaatgaacttctggtttgttttgttgcataactagttgatccagtcaaaa
ggatgcccacctccagatgtactacccactcaagttgcagagtgaccatt
atgctccaagaagcttatcaatttagctgtgtctgtcacaggagaacctg
cctgtccccattacactatcctcccagtacctgaccttaacacaataatg
tctacagccctactagactgcaataccccagaagctagctgtggtttttg
ttttccaccagctcatctattccaagtgaaatactttgcatatggtaggt
gagccgattcatagttgtttaatatataaatagcagaagccaggttatat
gccctaaatccttctctactaaacaacttggtcaaggcaattgtgatttg
tattggaaaggtgaggaataagacaacatgattggactagatatggctga
ttgcactggggtatttgctgatcttgcagaggagcaagactcagtcctca
gcttccacatggtagctcacaatcaattgcaattccagttccaaggaatc
tgctgtgctccttttggccaggcacatgactggcacagacacatacaggc
aggcagacatttatatacagaaaataaagatagtttctaaaaacagtagg
gtggttttgataaacctaaaaataattagaaacatagatagtggttgcca
tctttactcctcgggctatacatttcatgggcttttaaaaatgtattctt
ttctcatacaaatacttggccacagcttcctccctcacttatccagctcc
actcgctccacatgcttccctgtctaccagatcc
gaattcattcctactactataaacccagtcaaaaattgtggttgcgaggt
cagaggcccgaggaagaaacctaatactgctgttaggtacatttccataa
cctcaaactacttaagtatttacgtttataccctcagacaaaaacagctt
tcagccttaatcagagaagccactttttagtgaatgctgagatctttggc
tgttgaaggtgctagaaataagtaattgctaagagtttagccctcaaaag
gacatgctacatgttacaatctctaaggatctattctctctaaggacatt
ttagaaaaataggaggtcaaaaggtagaaagtagggctacaaaataccat
ctggtcatggtacccatctatcaaaatcacaaacttacagttgctgaagt
tgcctgtactggatcttcttttgaactggcttgccaatagtcagacatga
gtagaggtgggactcataggtcctacccctcactagtgaactattggttg
ctgataaactctgggatagaaggggtcttgccttcagttttgtactcagt
tgtgaatcctccaggacccaaagtcatggtcacataggaggccatggtta
aactcaatagatcacaaaataaaacaaaagggcacgagtctgggaaagga
cttacaggtaggagtggaggttgatacgtttgagaggatgtagagaagag
gggatgtgaataatcatagtgcattatacatttgtgtgaacttgtctcac
atcaaatttaattagaaaaattagaatcaggtaaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_119738094_119739138
seq2: B6Ng01-025M08.b_44_1077

seq1  GAATTCTCCTCTCATTCTCAATTATTAGTTATTTCAATTTGAAGACTGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCTCTCATTCTCAATTATTAGTTATTTCAATTTGAAGACTGTA  50

seq1  AATCCAGAAGTGATGTCCACAAAGCAATAACAAAAAAATAAAATAAAATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCAGAAGTGATGTCCACAAAGCAATAACAAAAAAATAAAATAAAATA  100

seq1  ATAAAATAAAATAAAATGGAGCATGACGTGTGAAATAAAAATTTTAAGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAATAAAATAAAATGGAGCATGACGTGTGAAATAAAAATTTTAAGAT  150

seq1  ATATGCTGTCTTAGCTGGAAAACTCATAAACGAATGGGTTTGCTTTTTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGCTGTCTTAGCTGGAAAACTCATAAACGAATGGGTTTGCTTTTTCA  200

seq1  GAATGAACTTCTGGTTTGTTTTGTTGCATAACTAGTTGATCCAGTCAAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGAACTTCTGGTTTGTTTTGTTGCATAACTAGTTGATCCAGTCAAAA  250

seq1  GGATGCCCACCTCCAGATGTACTACCCACTCAAGTTGCAGAGTGACCATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGCCCACCTCCAGATGTACTACCCACTCAAGTTGCAGAGTGACCATT  300

seq1  ATGCTCCAAGAAGCTTATCAATTTAGCTGTGTCTGTCACAGGAGAACCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTCCAAGAAGCTTATCAATTTAGCTGTGTCTGTCACAGGAGAACCTG  350

seq1  CCTGTCCCCATTACACTATCCTCCCAGTACCTGACCTTAACACAATAATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTCCCCATTACACTATCCTCCCAGTACCTGACCTTAACACAATAATG  400

seq1  TCTACAGCCCTACTAGACTGCAATACCCCAGAAGCTAGCTGTGGTTTTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACAGCCCTACTAGACTGCAATACCCCAGAAGCTAGCTGTGGTTTTTG  450

seq1  TTTTCCACCAGCTCATCTATTCCAAGTGAAATACTTTGCATATGGTAGGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCACCAGCTCATCTATTCCAAGTGAAATACTTTGCATATGGTAGGT  500

seq1  GAGCCGATTCATAGTTGTTTAATATATAAATAGCAGAAGCCAGGTTATAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCGATTCATAGTTGTTTAATATATAAATAGCAGAAGCCAGGTTATAT  550

seq1  GCCCTAAATCCTTCTCTACTAAACAACTTGGTCAAGGCAATTGTGATTTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTAAATCCTTCTCTACTAAACAACTTGGTCAAGGCAATTGTGATTTG  600

seq1  TATTGGAAAGGTGAGGAATAAGACAACATGATTGGACTAGATATGGCTGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGGAAAGGTGAGGAATAAGACAACATGATTGGACTAGATATGGCTGA  650

seq1  TTGCACTGGGGTATTTGCTGATCTTGCAGAGGAGCAAGACTCAGTCCTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCACTGGGGTATTTGCTGATCTTGCAGAGGAGCAAGACTCAGTCCTCA  700

seq1  GCTTCCACATGGTAGCTCACAATCAATTGCAATTCCAGTTCCAAGGAATC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCCACATGGTAGCTCACAATCAATTGCAATTCCAGTTCCAAGGAATC  750

seq1  TGCTGTGCTCC-TTTGGCCAGGCACATGACTGGCACAGACACATACAGGC  799
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  TGCTGTGCTCCTTTTGGCCAGGCACATGACTGGCACAGACACATACAGGC  800

seq1  AGGCAGACATTTATATACAGAAAATAAAGATAG-TTCTAAAAACCAGTAG  848
      ||||||||||||||||||||||||||||||||| ||||||||| ||||| 
seq2  AGGCAGACATTTATATACAGAAAATAAAGATAGTTTCTAAAAA-CAGTA-  848

seq1  GGGTGGTTTTGATAAACCTAAAAATAATTAGAAACATAGATAGTGGTTGC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGGTTTTGATAAACCTAAAAATAATTAGAAACATAGATAGTGGTTGC  898

seq1  CATCTTTTACCTCCTCGGGCTATACATTTCATGGGCTTTTTAAAAAATGT  948
      |||||||   ||||||||||||||||||||||||||||||  ||||||||
seq2  CATCTTT--ACTCCTCGGGCTATACATTTCATGGGCTTTT--AAAAATGT  944

seq1  ATTCTTTTCTCATACAATATACCTTGGCCACAGCTTTCCTCCCTCCACTT  998
      ||||||||||||||||| ||| |||||||||||| ||||||||| |||||
seq2  ATTCTTTTCTCATACAA-ATA-CTTGGCCACAGC-TTCCTCCCT-CACTT  990

seq1  ATCCCAGCTCCACTCGCCTCCACATGCCTCCCCTGTCTACCAGATCC  1045
      || ||||||||||||| ||||||||| || |||||||||||||||||
seq2  AT-CCAGCTCCACTCG-CTCCACATG-CTTCCCTGTCTACCAGATCC  1034