BAC Information

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BAC

Clone NameB6Ng01-028I24
Chromosome13 (Build37)
Map Location 73,556,186 - 73,557,221
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100042832, LOC100042836, Irx2, LOC621486, Irx4, LOC100042864, Ndufs6, Mrpl36
Downstream geneAytl2, Slc6a3, Clptm1l, Tert, Slc6a18, Slc6a19, Slc12a7, Nkd2, EG666360, Trip13, Brd9, Zdhhc11, LOC100042909, 2900041A09Rik, LOC621824, Cep72, Slc9a3, Exoc3, Ahrr, Pdcd6, Sdha, Ccdc127, AI595366, Zfp72, LOC666670, LOC634386
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-028I24.bB6Ng01-028I24.g
ACCDH859007DH859008
length1791,028
definitionDH859007|Mus musculus domesticus DNA, BAC clone: B6Ng01-028I24, 5' end.DH859008|Mus musculus domesticus DNA, BAC clone: B6Ng01-028I24, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcgacctccctcgctgactaccactacagtccagctgccaaccact
ccatcaccacctccagatcgccttctgggggggggggggactgggagggc
gaaggacaataaaaggggaccgtacacatagaaagtgttctatacttctt
taacaaaacaccaatgttgctgtgaatgt
gaattcacctcctggcagccctggaatttgcagtctgagcccatgggctg
gacagctggctcctgctgtaggcggtggggtagagatctttctgcttctc
caggcttctggtgtccagttgagtttctgaactaggtaatgaatgtcacc
atgacacgaccatatcttcaggccatgtaaagagaaggtacagtctgagg
ctccaggtggacacagacatgggggtattcttcaccccggtgctgctact
cacaacagttgtcttgtttggtttcccagcatggcagctgtcacaccagg
ccagtaccaggtcagtgactgtgactaggggtgctctctctgtgccacac
agaggccttgaccttcctgaccactctgcttacctcccggtggctgggct
tctgtccaccactatttaacccctaccttatcagaggtttccccactatg
aaggtgtcagactctcctgacctgggggtgcagagcgagcttgtacgcag
tggcagcatgtcctctatgcagtgtccttactcagagattcacccccagt
gctccgtaattaccatcctgtgggctttgttgtctcacatgatgtttgca
tggtgaacacgtccgttaatgtccatgtacttatgtacatgtacgaaggc
ttaaatggttaaacatgtaaagcaaatatactctgctagtggaaatcaga
ccttattttcttttaatttcagagttgtctgtggcaagctgacttgaaag
atgttgaaattggataggtaattaattcacacaagcctacaagagagggg
aggaatggacaaattatttgtaacattttgtaagcactgaaattaatgta
gtgtgaatttgtcatttctgccccacgttacagattttctatattataat
ttaatcttttaatgtaaaagaataggaattttgccctttctggcctctgg
gaagcagaactagtgtatctatttatcgaacatatagaacataaacgaat
agcagtagtgaattataattgggccgga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_73556186_73557221
seq2: B6Ng01-028I24.g_67_1094 (reverse)

seq1  TCCGGCCCATTTATAATTTCACTACTTGCTATTCCTTTATGTTCTTATAT  50
      ||||||||| |||||| |||||||| |||||||| ||||||||| |||||
seq2  TCCGGCCCAATTATAA-TTCACTAC-TGCTATTCGTTTATGTTC-TATAT  47

seq1  GTTCTGATAATTAGATACACTAGTTCTTGCTTCCCAAGAGGCCAGAAAGG  100
      |||| ||||| ||||||||||||||| |||||||| ||||||||||||||
seq2  GTTC-GATAAATAGATACACTAGTTC-TGCTTCCC-AGAGGCCAGAAAGG  94

seq1  GCAAAATTCCTATTCTTTTTACATTAAAAAGATTAAATTATAATATAGAA  150
      ||||||||||||||| ||||||||| ||||||||||||||||||||||||
seq2  GCAAAATTCCTATTC-TTTTACATT-AAAAGATTAAATTATAATATAGAA  142

seq1  AATCTGTAACGTGGGGCAGAAATGACAAATTCACACTACATTAATTTCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTGTAACGTGGGGCAGAAATGACAAATTCACACTACATTAATTTCAG  192

seq1  TGCTTACAAAATGTTACAAATAATTTGTCCATTCCTCCCCTCTCTTGTAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTACAAAATGTTACAAATAATTTGTCCATTCCTCCCCTCTCTTGTAG  242

seq1  GCTTGTGTGAATTAATTACCTATCCAATTTCAACATCTTTCAAGTCAGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGTGTGAATTAATTACCTATCCAATTTCAACATCTTTCAAGTCAGCT  292

seq1  TGCCACAGACAACTCTGAAATTAAAAGAAAATAAGGTCTGATTTCCACTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCACAGACAACTCTGAAATTAAAAGAAAATAAGGTCTGATTTCCACTA  342

seq1  GCAGAGTATATTTGCTTTACATGTTTAACCATTTAAGCCTTCGTACATGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAGTATATTTGCTTTACATGTTTAACCATTTAAGCCTTCGTACATGT  392

seq1  ACATAAGTACATGGACATTAACGGACGTGTTCACCATGCAAACATCATGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAAGTACATGGACATTAACGGACGTGTTCACCATGCAAACATCATGT  442

seq1  GAGACAACAAAGCCCACAGGATGGTAATTACGGAGCACTGGGGGTGAATC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACAACAAAGCCCACAGGATGGTAATTACGGAGCACTGGGGGTGAATC  492

seq1  TCTGAGTAAGGACACTGCATAGAGGACATGCTGCCACTGCGTACAAGCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAGTAAGGACACTGCATAGAGGACATGCTGCCACTGCGTACAAGCTC  542

seq1  GCTCTGCACCCCCAGGTCAGGAGAGTCTGACACCTTCATAGTGGGGAAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTGCACCCCCAGGTCAGGAGAGTCTGACACCTTCATAGTGGGGAAAC  592

seq1  CTCTGATAAGGTAGGGGTTAAATAGTGGTGGACAGAAGCCCAGCCACCGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGATAAGGTAGGGGTTAAATAGTGGTGGACAGAAGCCCAGCCACCGG  642

seq1  GAGGTAAGCAGAGTGGTCAGGAAGGTCAAGGCCTCTGTGTGGCACAGAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTAAGCAGAGTGGTCAGGAAGGTCAAGGCCTCTGTGTGGCACAGAGA  692

seq1  GAGCACCCCTAGTCACAGTCACTGACCTGGTACTGGCCTGGTGTGACAGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCACCCCTAGTCACAGTCACTGACCTGGTACTGGCCTGGTGTGACAGC  742

seq1  TGCCATGCTGGGAAACCAAACAAGACAACTGTTGTGAGTAGCAGCACCGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCATGCTGGGAAACCAAACAAGACAACTGTTGTGAGTAGCAGCACCGG  792

seq1  GGTGAAGAATACCCCCATGTCTGTGTCCACCTGGAGCCTCAGACTGTACC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGAAGAATACCCCCATGTCTGTGTCCACCTGGAGCCTCAGACTGTACC  842

seq1  TTCTCTTTACATGGCCTGAAGATATGGTCGTGTCATGGTGACATTCATTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTTTACATGGCCTGAAGATATGGTCGTGTCATGGTGACATTCATTA  892

seq1  CCTAGTTCAGAAACTCAACTGGACACCAGAAGCCTGGAGAAGCAGAAAGA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGTTCAGAAACTCAACTGGACACCAGAAGCCTGGAGAAGCAGAAAGA  942

seq1  TCTCTACCCCACCGCCTACAGCAGGAGCCAGCTGTCCAGCCCATGGGCTC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTACCCCACCGCCTACAGCAGGAGCCAGCTGTCCAGCCCATGGGCTC  992

seq1  AGACTGCAAATTCCAGGGCTGCCAGGAGGTGAATTC  1036
      ||||||||||||||||||||||||||||||||||||
seq2  AGACTGCAAATTCCAGGGCTGCCAGGAGGTGAATTC  1028