BAC Information

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BAC

Clone NameB6Ng01-029N22
Chromosome13 (Build37)
Map Location 12,437,167 - 12,586,632
singlet/doubletdoublet
Overlap geneEG432725, Heatr1, LOC546246, Lgals8, LOC100039900, Edaradd
Upstream geneZp4, Ryr2, LOC100039678, Mtr, LOC100039826, Actn2
Downstream geneEro1lb, LOC664862, EG238507, LOC100039744, EG630757, Prl2c3, LOC100039999, LOC100039754, Prl2c2, LOC434483, LOC674723, Prl2c5, LOC630611, LOC100039786, LOC385049, LOC630663, LOC100040108, Gpr137b, LOC664960, Nid1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-029N22.bB6Ng01-029N22.g
ACCDH859941DH859942
length1,124767
definitionDH859941|Mus musculus domesticus DNA, BAC clone: B6Ng01-029N22, 5' end.DH859942|Mus musculus domesticus DNA, BAC clone: B6Ng01-029N22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(12,585,491 - 12,586,632)(12,437,167 - 12,437,933)
sequence
gaattcagtccccaggagccacatggtaggagagaatccagacactgtcc
tctgacatccactctcatggcatttgcatacacatggacacagacagaca
gacagaaacacacagagggatagaattaaactttaaaaattaattaaata
aatgaaaatactcaagcctggtaaaatggttaacacctggcatcttagca
cttgggaggtaaaggaaggacaatcagtccaaggccatcctcagctcgtt
caaggctagcctgagctacatgggcccttgtctttaaaaaaacaaaaaac
aaaacaaaacaaaacaaaaaaaacaaagaaaagcaaaggaagagaaaaaa
atagaggctggagagatggctcagtggttaggagcgttgtggtctcttac
agaggtcttgatttgattctcagcacccacatggtgcctcatatccatct
gtaagtccaattaacacagatctaatgacctcttctggcttctgtgagcc
tgcacgtgtggcatatataaaaaacaatgaaatgatctatgtttttaaaa
acccaaaacaacaagaagtgaacaatagaatttctctttccatcttttga
taagcaagataattctgtcctaatccaatggccatcagattttatctcct
gctggtgtctaacttccttagagaacatcagtttactctttctagactac
agttgtgtacccagaccttgaccttgcaatagcctttgcactacccatct
ggtggtctggtcctgcagagttcatggccttacggggaagacgtcctgca
gttaacactctgcagtttttctttctgcccagcgttgcttctctctgcgg
gccccattgctttttgtcactccccgcacctcccttgtttgccttctgaa
cttgcccgtagccatagaaagagttcttgtcattcccaggccacagctct
ccggggcctgatgctgatccagtgatgtcctgtcagcattttgataagtt
tgggacctgcttgtcaattctgagcccactgtccttatttttgattctga
gaaaaatgatacgacctggtttcgcatgtgcacaataaactcacagtccc
caatgtcacccactgttcagagca
gaattcagtaatatgtaaaaaccaaaagagtatttatatccaacatatag
ctgggtgtggtggcatgtggttgtgatcaagcacttgggagtcaggggca
gggggattactgcaagtctgaggctagtcttatcgaccaagtgcgttcta
ggacagcctgggctgcatacagagactggacgcaacagtagagaaacagt
acatctaatatacagatccacataaagacagacagtgtagaggggtgcta
acagcaatctaacattctagcagatactcaatggcggcagtcatcaggaa
catgcaaactctcacacgctgtggtgggaacttaaaataatacaacagag
cggggcacggtggcacacgcctttaatcccagcactcgggaggcagaggc
aggcggatttctgagttcgaggccaccctggtctacaaagtgagttccag
gacagccagggctacacagagaaactctgtctcaaaaacaacaacagggg
catgagatagctgagcacataaaagcacgaaacactcaagatagataacc
tgagttcaattccgaagaaaccacacgaaaagccagatgcagtggtgtgc
atctatattttcatcattcctacagggagatggaaacagaattagctgga
agcccatatatgcatctcagcaaaaacaagtgagaccctgctcctaaaac
aggtgggaagagaaaacaaactcttgagaatttgtcttacctcttcgtgt
gtgtgtgtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_12585491_12586632
seq2: B6Ng01-029N22.b_45_1168 (reverse)

seq1  TGCTCTGAAACAGTGGGTGACATTGGGGACTGTGGGTTTATTGTGGCACC  50
      ||||||| |||||||||||||||||||||||||| ||||||||| |||| 
seq2  TGCTCTG-AACAGTGGGTGACATTGGGGACTGTGAGTTTATTGT-GCAC-  47

seq1  AATGCGAACCAAGGTCGGTATTCCATTTTTCTCAGGAATCAAAAATAGGG  100
       ||||||| | ||||| ||||  ||||||||||| |||||||||||| ||
seq2  -ATGCGAAACCAGGTC-GTAT--CATTTTTCTCA-GAATCAAAAATAAGG  92

seq1  ACAGTGGGCCTCAGAATTGACAAGGCAGGTCCCCAAACTTATCAAAATGC  150
      |||||||| |||||||||||||| |||||| |||||||||||||||||| 
seq2  ACAGTGGG-CTCAGAATTGACAA-GCAGGT-CCCAAACTTATCAAAATG-  138

seq1  CTGACCAGGACATTCACCTGGATCAGCATCAGGCCCCGGAGGGCTGTTGG  200
      |||| ||||||| ||| |||||||||||||||||||||||| |||| |||
seq2  CTGA-CAGGACA-TCA-CTGGATCAGCATCAGGCCCCGGAGAGCTG-TGG  184

seq1  CCTGGGAATGACAAGAACTTCTTTCTATGGCTACGGGCAAGTTCAGAAGG  250
      |||||||||||||||||| ||||||||||||||||||||||||||||| |
seq2  CCTGGGAATGACAAGAAC-TCTTTCTATGGCTACGGGCAAGTTCAGAA-G  232

seq1  GCAAACAAGGGAGGTGCGGGGAGTGACAAAAAGCAATGGGGCCCGCAGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAACAAGGGAGGTGCGGGGAGTGACAAAAAGCAATGGGGCCCGCAGAG  282

seq1  AGAAGCAACGCTGGGCAGAAAGAAAAACTGCAGAGTGTTAACTGCAGGAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGCAACGCTGGGCAGAAAGAAAAACTGCAGAGTGTTAACTGCAGGAC  332

seq1  GTCTTCCCCGTAAGGCCATGAACTCTGCAGGACCAGACCACCAGATGGGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTCCCCGTAAGGCCATGAACTCTGCAGGACCAGACCACCAGATGGGT  382

seq1  AGTGCAAAGGCTATTGCAAGGTCAAGGTCTGGGTACACAACTGTAGTCTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCAAAGGCTATTGCAAGGTCAAGGTCTGGGTACACAACTGTAGTCTA  432

seq1  GAAAGAGTAAACTGATGTTCTCTAAGGAAGTTAGACACCAGCAGGAGATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAGTAAACTGATGTTCTCTAAGGAAGTTAGACACCAGCAGGAGATA  482

seq1  AAATCTGATGGCCATTGGATTAGGACAGAATTATCTTGCTTATCAAAAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTGATGGCCATTGGATTAGGACAGAATTATCTTGCTTATCAAAAGA  532

seq1  TGGAAAGAGAAATTCTATTGTTCACTTCTTGTTGTTTTGGGTTTTTAAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAAGAGAAATTCTATTGTTCACTTCTTGTTGTTTTGGGTTTTTAAAA  582

seq1  ACATAGATCATTTCATTGTTTTTTATATATGCCACACGTGCAGGCTCACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAGATCATTTCATTGTTTTTTATATATGCCACACGTGCAGGCTCACA  632

seq1  GAAGCCAGAAGAGGTCATTAGATCTGTGTTAATTGGACTTACAGATGGAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCCAGAAGAGGTCATTAGATCTGTGTTAATTGGACTTACAGATGGAT  682

seq1  ATGAGGCACCATGTGGGTGCTGAGAATCAAATCAAGACCTCTGTAAGAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGGCACCATGTGGGTGCTGAGAATCAAATCAAGACCTCTGTAAGAGA  732

seq1  CCACAACGCTCCTAACCACTGAGCCATCTCTCCAGCCTCTATTTTTTTCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAACGCTCCTAACCACTGAGCCATCTCTCCAGCCTCTATTTTTTTCT  782

seq1  CTTCCTTTGCTTTTCTTTGTTTTTTTTGTTTTGTTTTGTTTTGTTTTTTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTTTGCTTTTCTTTGTTTTTTTTGTTTTGTTTTGTTTTGTTTTTTG  832

seq1  TTTTTTTAAAGACAAGGGCCCATGTAGCTCAGGCTAGCCTTGAACGAGCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTAAAGACAAGGGCCCATGTAGCTCAGGCTAGCCTTGAACGAGCT  882

seq1  GAGGATGGCCTTGGACTGATTGTCCTTCCTTTACCTCCCAAGTGCTAAGA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGATGGCCTTGGACTGATTGTCCTTCCTTTACCTCCCAAGTGCTAAGA  932

seq1  TGCCAGGTGTTAACCATTTTACCAGGCTTGAGTATTTTCATTTATTTAAT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAGGTGTTAACCATTTTACCAGGCTTGAGTATTTTCATTTATTTAAT  982

seq1  TAATTTTTAAAGTTTAATTCTATCCCTCTGTGTGTTTCTGTCTGTCTGTC  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTTTAAAGTTTAATTCTATCCCTCTGTGTGTTTCTGTCTGTCTGTC  1032

seq1  TGTGTCCATGTGTATGCAAATGCCATGAGAGTGGATGTCAGAGGACAGTG  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTCCATGTGTATGCAAATGCCATGAGAGTGGATGTCAGAGGACAGTG  1082

seq1  TCTGGATTCTCTCCTACCATGTGGCTCCTGGGGACTGAATTC  1142
      ||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGATTCTCTCCTACCATGTGGCTCCTGGGGACTGAATTC  1124

seq1: chr13_12437167_12437933
seq2: B6Ng01-029N22.g_67_833

seq1  GAATTCAGTAATATGTAAAAACCAAAAGAGTATTTATATCCAACATATAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTAATATGTAAAAACCAAAAGAGTATTTATATCCAACATATAG  50

seq1  CTGGGTGTGGTGGCATGTGGTTGTGATCAAGCACTTGGGAGTCAGGGGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGTGTGGTGGCATGTGGTTGTGATCAAGCACTTGGGAGTCAGGGGCA  100

seq1  GGGGGATTACTGCAAGTCTGAGGCTAGTCTTATCGACCAAGTGCGTTCTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGATTACTGCAAGTCTGAGGCTAGTCTTATCGACCAAGTGCGTTCTA  150

seq1  GGACAGCCTGGGCTGCATACAGAGACTGGACGCAACAGTAGAGAAACAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACAGCCTGGGCTGCATACAGAGACTGGACGCAACAGTAGAGAAACAGT  200

seq1  ACATCTAATATACAGATCCACATAAAGACAGACAGTGTAGAGGGGTGCTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCTAATATACAGATCCACATAAAGACAGACAGTGTAGAGGGGTGCTA  250

seq1  ACAGCAATCTAACATTCTAGCAGATACTCAATGGCGGCAGTCATCAGGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCAATCTAACATTCTAGCAGATACTCAATGGCGGCAGTCATCAGGAA  300

seq1  CATGCAAACTCTCACACGCTGTGGTGGGAACTTAAAATAATACAACAGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCAAACTCTCACACGCTGTGGTGGGAACTTAAAATAATACAACAGAG  350

seq1  CGGGGCACGGTGGCACACGCCTTTAATCCCAGCACTCGGGAGGCAGAGGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGGCACGGTGGCACACGCCTTTAATCCCAGCACTCGGGAGGCAGAGGC  400

seq1  AGGCGGATTTCTGAGTTCGAGGCCACCCTGGTCTACAAAGTGAGTTCCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCGGATTTCTGAGTTCGAGGCCACCCTGGTCTACAAAGTGAGTTCCAG  450

seq1  GACAGCCAGGGCTACACAGAGAAACTCTGTCTCAAAAACAACAACAGGGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGCCAGGGCTACACAGAGAAACTCTGTCTCAAAAACAACAACAGGGG  500

seq1  CATGAGATAGCTGAGCACATAAAAGCACGAAACACTCAAGATAGATAACC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAGATAGCTGAGCACATAAAAGCACGAAACACTCAAGATAGATAACC  550

seq1  TGAGTTCAATTCCGAAGAAACCACACGAAAAGCCAGATGCAGTGGTGTGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTTCAATTCCGAAGAAACCACACGAAAAGCCAGATGCAGTGGTGTGC  600

seq1  ATCTATATTTTCATCATTCCTACAGGGAGATGGAAACAGAATTAGCTGGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTATATTTTCATCATTCCTACAGGGAGATGGAAACAGAATTAGCTGGA  650

seq1  AGCCCATATATGCATCTCAGCAAAAACAAGTGAGACCCTGCTCCTAAAAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCATATATGCATCTCAGCAAAAACAAGTGAGACCCTGCTCCTAAAAC  700

seq1  AGGTGGGAAGAGAAAACAAACTCTTGAGAATTTGTCTTACCTCTTCGTGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGGGAAGAGAAAACAAACTCTTGAGAATTTGTCTTACCTCTTCGTGT  750

seq1  GTGTGTGTGTGTGTGTG  767
      |||||||||||||||||
seq2  GTGTGTGTGTGTGTGTG  767