BAC Information

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BAC

Clone NameB6Ng01-030B13
Chromosome13 (Build37)
Map Location 32,113,884 - 32,270,539
singlet/doubletdoublet
Overlap geneGmds
Upstream geneLOC100041266, G630018N14Rik, LOC100042491, Foxq1, LOC100041312, Foxf2, Foxc1, 4930548F15Rik, LOC666212
Downstream geneWrnip1, Serpinb1a, Serpinb1-ps1, Serpinb1c, Serpinb6b, Serpinb9, Serpinb9b, Serpinb1b, LOC628301, Serpinb9c
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-030B13.bB6Ng01-030B13.g
ACCDH860102DH860103
length1,106280
definitionDH860102|Mus musculus domesticus DNA, BAC clone: B6Ng01-030B13, 5' end.DH860103|Mus musculus domesticus DNA, BAC clone: B6Ng01-030B13, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(32,269,422 - 32,270,539)(32,113,884 - 32,114,163)
sequence
gaattctaaagacatggatagctgcttacctttattatatctatatttat
atatttcctgacatttataagatgagaataataattaatgagtgtatgta
gtcctattattgtttaacattcctttggcatttttcctgatataagacat
ttggcatgaagaagtactatgtatgataggttacctctaagggatggcta
atgtctaattctagaaggccttccaataagggaggtcagacatggcttaa
atttcttaatacaaataggtagtaaggttttgggaaggactgtttttgtt
ttcagaaaaaaatcaatagactagctcattcctgggatgtgcatttatga
acacagattcatagtcttgtgttgatgtacttagatggttatccagctaa
gacataatttatcaacaccttgttatcttaaatactttacttagcagggc
cataaatcctccttaaagggactttattttgccacttaattaagtctccc
ttgtttccttcattgagtttaaaagggcgttcaaggttgacttaattttc
attaggcactcaatttcttacctattaaactcaggaaagaatactgtcat
ctaagccttcatgacacagtaaactgaaggctgagacagaccacaggcca
actttgtcagagatgggatgagtccgagaggagaggctgagatactcttt
tactataccattctgtgctatttctctttaaagaacccaattgtgtaaac
ttgtagtgatgctgctgacagaagtgtgagcttttacttagtgtaacgtg
gtgaatgaatgaatgaatgaatgtgatggggatacagatataaataagat
attttactggaactactgaagccataaatatgtgaaatagaaatgtatga
aaagaacagtagtgatttctttgcagataagaagtatatgtggacctccc
cttagctggttagggctgaaagaatggttagtttagatttgcataatagt
atagtccaggccgaaaagactaaatctggaaggtaaacctttgcttgacc
tgtgctgtattaagccccatgtctccgctcgatgaaggacacctgagagc
gagatg
aaatacagaacttgctatttgctggctgtatttttttggcaactccttct
aatctcttcagccctcagtttcatacatttgaagaagacccctacatagg
tctgctctgaggggataagacaacacacaactttgcaagaggtaatggct
tccaaaactcttgtgagtatgtatgtatgtatgtatgtgtgtgtgtgtgt
gtgtgcatgcatgcatacatgtatgtattatctatctttctgtctattca
ttatttttttttgagacagggtcttaccat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_32269422_32270539
seq2: B6Ng01-030B13.b_45_1150 (reverse)

seq1  CATC-CGCTCTCAGGTGTCC-TCATGCAGACTGGAGGACATGGGGGCTTC  48
      |||| ||||||||||||||| ||||   ||  ||| ||||| ||||||| 
seq2  CATCTCGCTCTCAGGTGTCCTTCAT--CGAGCGGA-GACAT-GGGGCTTA  46

seq1  ATGCAGGCCACAGGTC-AGCAAAGGCTCTACCCTCCAGTATCTAGTCTTC  97
      || |||  |||||||| |||||||| | |||| ||||| || ||||||| 
seq2  ATACAG--CACAGGTCAAGCAAAGG-TTTACCTTCCAG-ATTTAGTCTTT  92

seq1  TCGGCCTGGAC-ATACTATTATGCAAATCTTAAAACTTACCCATTCTTTC  146
      ||||||||||| ||||||||||||||||||  |||| || ||||||||||
seq2  TCGGCCTGGACTATACTATTATGCAAATCT--AAAC-TAACCATTCTTTC  139

seq1  AGCCCTACCCAGCTAAGGGGAGGTCCACATATACCTTCCTTTATCTGCAA  196
      ||||||| ||||||||||||||||||||||||| ||||  ||||||||||
seq2  AGCCCTAACCAGCTAAGGGGAGGTCCACATATA-CTTC--TTATCTGCAA  186

seq1  AGAAATCACCTACTGTTCTTTTTCATACATTTCTATTTCACATATTTATG  246
      |||||||| ||||||||| |||||||||||||||||||||||||||||||
seq2  AGAAATCA-CTACTGTTC-TTTTCATACATTTCTATTTCACATATTTATG  234

seq1  GCTTCAGTAGTTCCAGTAAAATATCTTATTTATATCTGTATCCCCATCAC  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCAGTAGTTCCAGTAAAATATCTTATTTATATCTGTATCCCCATCAC  284

seq1  ATTCATTCATTCATTCATTCACCACCTTACACTAAGTAAAAGCTCACACT  346
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  ATTCATTCATTCATTCATTCACCACGTTACACTAAGTAAAAGCTCACACT  334

seq1  TCTGTCAGCAGCATCACTACAAGTTTACACAATTGGGTTCTTTAAAGAGA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTCAGCAGCATCACTACAAGTTTACACAATTGGGTTCTTTAAAGAGA  384

seq1  AATAGCACAGAATGGTATAGTAAAAGAGTATCTCAGCCTCTCCTCTCGGA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGCACAGAATGGTATAGTAAAAGAGTATCTCAGCCTCTCCTCTCGGA  434

seq1  CTCATCCCATCTCTGACAAAGTTGGCCTGTGGTCTGTCTCAGCCTTCAGT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATCCCATCTCTGACAAAGTTGGCCTGTGGTCTGTCTCAGCCTTCAGT  484

seq1  TTACTGTGTCATGAAGGCTTAGATGACAGTATTCTTTCCTGAGTTTAATA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTGTGTCATGAAGGCTTAGATGACAGTATTCTTTCCTGAGTTTAATA  534

seq1  GGTAAGAAATTGAGTGCCTAATGAAAATTAAGTCAACCTTGAACGCCCTT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAAGAAATTGAGTGCCTAATGAAAATTAAGTCAACCTTGAACGCCCTT  584

seq1  TTAAACTCAATGAAGGAAACAAGGGAGACTTAATTAAGTGGCAAAATAAA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAACTCAATGAAGGAAACAAGGGAGACTTAATTAAGTGGCAAAATAAA  634

seq1  GTCCCTTTAAGGAGGATTTATGGCCCTGCTAAGTAAAGTATTTAAGATAA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCTTTAAGGAGGATTTATGGCCCTGCTAAGTAAAGTATTTAAGATAA  684

seq1  CAAGGTGTTGATAAATTATGTCTTAGCTGGATAACCATCTAAGTACATCA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGTGTTGATAAATTATGTCTTAGCTGGATAACCATCTAAGTACATCA  734

seq1  ACACAAGACTATGAATCTGTGTTCATAAATGCACATCCCAGGAATGAGCT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAAGACTATGAATCTGTGTTCATAAATGCACATCCCAGGAATGAGCT  784

seq1  AGTCTATTGATTTTTTTCTGAAAACAAAAACAGTCCTTCCCAAAACCTTA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTATTGATTTTTTTCTGAAAACAAAAACAGTCCTTCCCAAAACCTTA  834

seq1  CTACCTATTTGTATTAAGAAATTTAAGCCATGTCTGACCTCCCTTATTGG  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCTATTTGTATTAAGAAATTTAAGCCATGTCTGACCTCCCTTATTGG  884

seq1  AAGGCCTTCTAGAATTAGACATTAGCCATCCCTTAGAGGTAACCTATCAT  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCCTTCTAGAATTAGACATTAGCCATCCCTTAGAGGTAACCTATCAT  934

seq1  ACATAGTACTTCTTCATGCCAAATGTCTTATATCAGGAAAAATGCCAAAG  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAGTACTTCTTCATGCCAAATGTCTTATATCAGGAAAAATGCCAAAG  984

seq1  GAATGTTAAACAATAATAGGACTACATACACTCATTAATTATTATTCTCA  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGTTAAACAATAATAGGACTACATACACTCATTAATTATTATTCTCA  1034

seq1  TCTTATAAATGTCAGGAAATATATAAATATAGATATAATAAAGGTAAGCA  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTATAAATGTCAGGAAATATATAAATATAGATATAATAAAGGTAAGCA  1084

seq1  GCTATCCATGTCTTTAGAATTC  1118
      ||||||||||||||||||||||
seq2  GCTATCCATGTCTTTAGAATTC  1106

seq1: chr13_32113884_32114163
seq2: B6Ng01-030B13.g_74_353

seq1  AAATACAGAACTTGCTATTTGCTGGCTGTATTTTTTTGGCAACTCCTTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACAGAACTTGCTATTTGCTGGCTGTATTTTTTTGGCAACTCCTTCT  50

seq1  AATCTCTTCAGCCCTCAGTTTCATACATTTGAAGAAGACCCCTACATAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTCTTCAGCCCTCAGTTTCATACATTTGAAGAAGACCCCTACATAGG  100

seq1  TCTGCTCTGAGGGGATAAGACAACACACAACTTTGCAAGAGGTAATGGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTCTGAGGGGATAAGACAACACACAACTTTGCAAGAGGTAATGGCT  150

seq1  TCCAAAACTCTTGTGAGTATGTATGTATGTATGTATGTGTGTGTGTGTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAAACTCTTGTGAGTATGTATGTATGTATGTATGTGTGTGTGTGTGT  200

seq1  GTGTGCATGCATGCATACATGTATGTATTATCTATCTTTCTGTCTATTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGCATGCATGCATACATGTATGTATTATCTATCTTTCTGTCTATTCA  250

seq1  TTATTTTATTTTGAGACAGGGTCTTACCAT  280
      ||||||| ||||||||||||||||||||||
seq2  TTATTTTTTTTTGAGACAGGGTCTTACCAT  280